RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 A0A1B0GVX0 72 aa9.04□□□□□ -0.96
HERPUD1-201ENST00000300302 WFDC13Q8IUB5 93 aa9.02□□□□□ -0.96
HERPUD1-201ENST00000300302 CASC2Q6XLA1 102 aa9.02□□□□□ -0.97
HERPUD1-201ENST00000300302 IGHV6-1A0A0B4J1U7 121 aa9.01□□□□□ -0.97
HERPUD1-201ENST00000300302 C1orf195Q5TG92 126 aa9.01□□□□□ -0.97
HERPUD1-201ENST00000300302 MMP24-AS1A0A0U1RRL7 71 aa8.99□□□□□ -0.97
HERPUD1-201ENST00000300302 KRTAP29-1A8MX34 341 aaPredicted RBP8.99□□□□□ -0.97
HERPUD1-201ENST00000300302 OCR1Q9BZK8 76 aa8.98□□□□□ -0.97
HERPUD1-201ENST00000300302 CYSTM1Q9H1C7 97 aa8.98□□□□□ -0.97
HERPUD1-201ENST00000300302 C8orf17Q9NRJ1 99 aa8.98□□□□□ -0.97
HERPUD1-201ENST00000300302 hDV103S1A0JD37 113 aa8.98□□□□□ -0.97
HERPUD1-201ENST00000300302 KRTAP4-5Q9BYR2 181 aa8.95□□□□□ -0.98
HERPUD1-201ENST00000300302 C20orf197Q8N268 126 aa8.94□□□□□ -0.98
HERPUD1-201ENST00000300302 C8orf87E5RJ46 101 aa8.93□□□□□ -0.98
HERPUD1-201ENST00000300302 HERC2O95714 4834 aa8.91□□□□□ -0.98
HERPUD1-201ENST00000300302 KRTAP10-8P60410 259 aa8.9□□□□□ -0.98
HERPUD1-201ENST00000300302 TMEM254Q8TBM7 123 aa8.9□□□□□ -0.98
HERPUD1-201ENST00000300302 LINC00313P59037 77 aa8.89□□□□□ -0.99
HERPUD1-201ENST00000300302 KLKP1Q107X0 134 aa8.89□□□□□ -0.99
HERPUD1-201ENST00000300302 NOTCH2NLQ7Z3S9 236 aa8.89□□□□□ -0.99
HERPUD1-201ENST00000300302 MRPL34Q9BQ48 92 aaKnown RBP8.89□□□□□ -0.99
HERPUD1-201ENST00000300302 LRP1Q07954 4544 aaKnown RBP8.89□□□□□ -0.99
HERPUD1-201ENST00000300302 FAT3Q8TDW7 4589 aa8.87□□□□□ -0.99
HERPUD1-201ENST00000300302 C5orf47Q569G3 176 aa8.86□□□□□ -0.99
HERPUD1-201ENST00000300302 TP53AIP1Q9HCN2 124 aa8.85□□□□□ -0.99
HERPUD1-201ENST00000300302 SNURFQ9Y675 71 aa8.85□□□□□ -0.99
HERPUD1-201ENST00000300302 NDUFS5O43920 106 aa8.84□□□□□ -0.99
HERPUD1-201ENST00000300302 TMEM258P61165 79 aa8.83□□□□□ -1
HERPUD1-201ENST00000300302 A0A0U1RQV1 116 aa8.83□□□□□ -1
HERPUD1-201ENST00000300302 TNXBP22105 4242 aa8.82□□□□□ -1
HERPUD1-201ENST00000300302 H7BZZ5 65 aa8.81□□□□□ -1
HERPUD1-201ENST00000300302 MP68P56378 58 aa8.81□□□□□ -1
HERPUD1-201ENST00000300302 MYCBP2O75592 4640 aa8.8□□□□□ -1
HERPUD1-201ENST00000300302 ABCA13Q86UQ4 5058 aa8.79□□□□□ -1
HERPUD1-201ENST00000300302 TRAV22A0A0B4J277 110 aa8.77□□□□□ -1.01
HERPUD1-201ENST00000300302 OXTP01178 125 aa8.77□□□□□ -1.01
HERPUD1-201ENST00000300302 H0Y9P7 68 aa8.77□□□□□ -1.01
HERPUD1-201ENST00000300302 RETNLBQ9BQ08 111 aa8.77□□□□□ -1.01
HERPUD1-201ENST00000300302 NDUFC1O43677 76 aa8.76□□□□□ -1.01
HERPUD1-201ENST00000300302 KRTAP16-1A8MUX0 517 aa8.75□□□□□ -1.01
HERPUD1-201ENST00000300302 H3BPC8 53 aa8.75□□□□□ -1.01
HERPUD1-201ENST00000300302 MT1HL1P0DM35 61 aa8.75□□□□□ -1.01
HERPUD1-201ENST00000300302 Q8N9P0 234 aaPredicted RBP8.75□□□□□ -1.01
HERPUD1-201ENST00000300302 FLG2Q5D862 2391 aaPredicted RBP8.75□□□□□ -1.01
HERPUD1-201ENST00000300302 ZCCHC13Q8WW36 166 aaKnown RBP8.74□□□□□ -1.01
HERPUD1-201ENST00000300302 LINC00208Q96KT6 92 aa8.72□□□□□ -1.01
HERPUD1-201ENST00000300302 FAM236DA0A1B0GTK5 79 aa8.7□□□□□ -1.02
HERPUD1-201ENST00000300302 FAM236CP0DP71 79 aa8.7□□□□□ -1.02
HERPUD1-201ENST00000300302 FP248Q71RG6 208 aaPredicted RBP8.7□□□□□ -1.02
HERPUD1-201ENST00000300302 C1orf64Q8NEQ6 169 aa8.68□□□□□ -1.02
HERPUD1-201ENST00000300302 C9orf92A6NGG3 77 aa8.66□□□□□ -1.02
HERPUD1-201ENST00000300302 Q5W150 140 aa8.64□□□□□ -1.03
HERPUD1-201ENST00000300302 RPS28P62857 69 aaKnown RBP8.64□□□□□ -1.03
HERPUD1-201ENST00000300302 ATP5EP56381 51 aaPredicted RBP8.62□□□□□ -1.03
HERPUD1-201ENST00000300302 KRTAP13-3Q3SY46 172 aa8.62□□□□□ -1.03
HERPUD1-201ENST00000300302 DMBT1Q9UGM3 2413 aaPredicted RBP8.62□□□□□ -1.03
HERPUD1-201ENST00000300302 LOC101927531A0A1B0GV80 90 aa8.6□□□□□ -1.03
HERPUD1-201ENST00000300302 IGLV7-46A0A075B6I9 117 aa8.6□□□□□ -1.03
HERPUD1-201ENST00000300302 C20orf166-AS1Q96NR2 134 aa8.6□□□□□ -1.03
HERPUD1-201ENST00000300302 A8MUU9 505 aa8.58□□□□□ -1.04
HERPUD1-201ENST00000300302 J3QL48 77 aa8.58□□□□□ -1.04
HERPUD1-201ENST00000300302 SERP1Q9Y6X1 66 aa8.56□□□□□ -1.04
HERPUD1-201ENST00000300302 PRR4Q16378 134 aa8.54□□□□□ -1.04
HERPUD1-201ENST00000300302 PCLOQ9Y6V0 5065 aa8.54□□□□□ -1.04
HERPUD1-201ENST00000300302 Q75L30 129 aa8.53□□□□□ -1.04
HERPUD1-201ENST00000300302 PCOTHQ58A44 107 aa8.52□□□□□ -1.05
HERPUD1-201ENST00000300302 CYP4F30PQ9H0H9 118 aa8.52□□□□□ -1.05
HERPUD1-201ENST00000300302 IGKV2-30P06310 120 aa8.51□□□□□ -1.05
HERPUD1-201ENST00000300302 SPANXA2-OT1Q8N9U9 137 aa8.51□□□□□ -1.05
HERPUD1-201ENST00000300302 IGKV2D-30A0A075B6S6 120 aa8.46□□□□□ -1.06
HERPUD1-201ENST00000300302 XP32Q5T750 250 aa8.45□□□□□ -1.06
HERPUD1-201ENST00000300302 TPRXLQ17RH7 258 aa8.44□□□□□ -1.06
HERPUD1-201ENST00000300302 C7orf65Q6ZTY9 151 aa8.43□□□□□ -1.06
HERPUD1-201ENST00000300302 RPL37P61927 97 aaKnown RBP8.43□□□□□ -1.06
HERPUD1-201ENST00000300302 ATP11AUNQ6ZP68 121 aa8.43□□□□□ -1.06
HERPUD1-201ENST00000300302 HRES1P13985 223 aa8.38□□□□□ -1.07
HERPUD1-201ENST00000300302 SMIM26A0A096LP01 95 aa8.36□□□□□ -1.07
HERPUD1-201ENST00000300302 SPINK7P58062 85 aa8.33□□□□□ -1.08
HERPUD1-201ENST00000300302 HERC1Q15751 4861 aa8.32□□□□□ -1.08
HERPUD1-201ENST00000300302 LPAP08519 4548 aa8.3□□□□□ -1.08
HERPUD1-201ENST00000300302 DMAC1Q96GE9 116 aa8.28□□□□□ -1.08
HERPUD1-201ENST00000300302 ACYP2P14621 99 aa8.26□□□□□ -1.09
HERPUD1-201ENST00000300302 COA5Q86WW8 74 aa8.24□□□□□ -1.09
HERPUD1-201ENST00000300302 C4orf26Q17RF5 130 aa8.23□□□□□ -1.09
HERPUD1-201ENST00000300302 A8MUN3 132 aa8.2□□□□□ -1.1
HERPUD1-201ENST00000300302 HMCN2Q8NDA2 5059 aa8.19□□□□□ -1.1
HERPUD1-201ENST00000300302 MPLKIPQ8TAP9 179 aa8.18□□□□□ -1.1
HERPUD1-201ENST00000300302 SEC61BP60468 96 aaKnown RBP8.17□□□□□ -1.1
HERPUD1-201ENST00000300302 Q1T7F1 81 aa8.16□□□□□ -1.1
HERPUD1-201ENST00000300302 LRP2P98164 4655 aa8.16□□□□□ -1.1
HERPUD1-201ENST00000300302 CHKB-CPT1BH3BT56 60 aa8.14□□□□□ -1.11
HERPUD1-201ENST00000300302 COX6B2Q6YFQ2 88 aa8.13□□□□□ -1.11
HERPUD1-201ENST00000300302 KRTAP3-1Q9BYR8 98 aa8.08□□□□□ -1.12
HERPUD1-201ENST00000300302 V9GYY9 64 aa8.06□□□□□ -1.12
HERPUD1-201ENST00000300302 RBM12B-AS1Q9P1G2 102 aa8□□□□□ -1.13
HERPUD1-201ENST00000300302 MUC17Q685J3 4493 aa8□□□□□ -1.13
HERPUD1-201ENST00000300302 PSPHP1O15172 72 aa8□□□□□ -1.13
HERPUD1-201ENST00000300302 SPTSSBQ8NFR3 76 aa7.98□□□□□ -1.13
HERPUD1-201ENST00000300302 LINC01558Q9Y6Z2 57 aa7.98□□□□□ -1.13
HERPUD1-201ENST00000300302 Q5VV11 94 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms