RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 CIRBP-AS1Q8TBR5 109 aa11.63□□□□□ -0.55
NFIL3-201ENST00000297689 IGHV6-1A0A0B4J1U7 121 aa11.63□□□□□ -0.55
NFIL3-201ENST00000297689 A0A087X002 238 aa11.61□□□□□ -0.55
NFIL3-201ENST00000297689 KRTAP10-1P60331 282 aa11.61□□□□□ -0.55
NFIL3-201ENST00000297689 CD164Q04900 197 aa11.61□□□□□ -0.55
NFIL3-201ENST00000297689 NOTCH2NLQ7Z3S9 236 aa11.61□□□□□ -0.55
NFIL3-201ENST00000297689 MRPL34Q9BQ48 92 aaKnown RBP11.59□□□□□ -0.55
NFIL3-201ENST00000297689 Q6ZSA8 131 aa11.58□□□□□ -0.56
NFIL3-201ENST00000297689 SSBP3-AS1Q7Z2R9 100 aa11.58□□□□□ -0.56
NFIL3-201ENST00000297689 KMT2CQ8NEZ4 4911 aaKnown RBP11.58□□□□□ -0.56
NFIL3-201ENST00000297689 CDK2AP2O75956 126 aa11.57□□□□□ -0.56
NFIL3-201ENST00000297689 IGLV7-46A0A075B6I9 117 aa11.56□□□□□ -0.56
NFIL3-201ENST00000297689 PRO0628Q9UI54 55 aa11.56□□□□□ -0.56
NFIL3-201ENST00000297689 LRP1BQ9NZR2 4599 aa11.55□□□□□ -0.56
NFIL3-201ENST00000297689 RYR2Q92736 4967 aa11.55□□□□□ -0.56
NFIL3-201ENST00000297689 NDUFS5O43920 106 aa11.48□□□□□ -0.57
NFIL3-201ENST00000297689 KRTAP13-3Q3SY46 172 aa11.48□□□□□ -0.57
NFIL3-201ENST00000297689 KRTAP13-2Q52LG2 175 aa11.47□□□□□ -0.57
NFIL3-201ENST00000297689 SPINK6Q6UWN8 80 aa11.47□□□□□ -0.57
NFIL3-201ENST00000297689 PCOTHQ58A44 107 aa11.45□□□□□ -0.58
NFIL3-201ENST00000297689 Q5W150 140 aa11.42□□□□□ -0.58
NFIL3-201ENST00000297689 V9GYY9 64 aa11.42□□□□□ -0.58
NFIL3-201ENST00000297689 Q8N9P0 234 aaPredicted RBP11.42□□□□□ -0.58
NFIL3-201ENST00000297689 BRK1Q8WUW1 75 aa11.42□□□□□ -0.58
NFIL3-201ENST00000297689 C8orf87E5RJ46 101 aa11.41□□□□□ -0.58
NFIL3-201ENST00000297689 COA5Q86WW8 74 aa11.4□□□□□ -0.58
NFIL3-201ENST00000297689 PKHD1P08F94 4074 aa11.4□□□□□ -0.59
NFIL3-201ENST00000297689 KRTAP1-4P0C5Y4 121 aa11.39□□□□□ -0.59
NFIL3-201ENST00000297689 C1orf195Q5TG92 126 aa11.39□□□□□ -0.59
NFIL3-201ENST00000297689 PSPHP1O15172 72 aa11.37□□□□□ -0.59
NFIL3-201ENST00000297689 LOC101927531A0A1B0GV80 90 aa11.37□□□□□ -0.59
NFIL3-201ENST00000297689 VPS13BQ7Z7G8 4022 aa11.36□□□□□ -0.59
NFIL3-201ENST00000297689 A8MUN3 132 aa11.34□□□□□ -0.59
NFIL3-201ENST00000297689 A0A1B0GVY2 172 aa11.33□□□□□ -0.6
NFIL3-201ENST00000297689 RYR3Q15413 4870 aa11.33□□□□□ -0.6
NFIL3-201ENST00000297689 DYNC1H1Q14204 4646 aaKnown RBP11.33□□□□□ -0.6
NFIL3-201ENST00000297689 LIMD2Q9BT23 127 aa11.32□□□□□ -0.6
NFIL3-201ENST00000297689 Q5VV11 94 aa11.32□□□□□ -0.6
NFIL3-201ENST00000297689 LINC00313P59037 77 aa11.3□□□□□ -0.6
NFIL3-201ENST00000297689 HRES1P13985 223 aa11.28□□□□□ -0.6
NFIL3-201ENST00000297689 KRTAP16-1A8MUX0 517 aa11.26□□□□□ -0.61
NFIL3-201ENST00000297689 FAM229AH3BQW9 127 aa11.22□□□□□ -0.61
NFIL3-201ENST00000297689 APOBP04114 4563 aaKnown RBP11.2□□□□□ -0.62
NFIL3-201ENST00000297689 PLA2G1BP04054 148 aaKnown RBP11.18□□□□□ -0.62
NFIL3-201ENST00000297689 PRR15LQ9BU68 103 aa11.18□□□□□ -0.62
NFIL3-201ENST00000297689 LINC01558Q9Y6Z2 57 aa11.18□□□□□ -0.62
NFIL3-201ENST00000297689 Q75L30 129 aa11.16□□□□□ -0.62
NFIL3-201ENST00000297689 IGKV2-30P06310 120 aa11.15□□□□□ -0.63
NFIL3-201ENST00000297689 SPINK1P00995 79 aa11.13□□□□□ -0.63
NFIL3-201ENST00000297689 TYMSOSQ8TAI1 123 aa11.13□□□□□ -0.63
NFIL3-201ENST00000297689 SMR3BP02814 79 aaPredicted RBP11.13□□□□□ -0.63
NFIL3-201ENST00000297689 CHKB-CPT1BH3BT56 60 aa11.12□□□□□ -0.63
NFIL3-201ENST00000297689 SPAG11AQ6PDA7 123 aa11.12□□□□□ -0.63
NFIL3-201ENST00000297689 DMAC1Q96GE9 116 aa11.12□□□□□ -0.63
NFIL3-201ENST00000297689 A8MU10 97 aa11.1□□□□□ -0.63
NFIL3-201ENST00000297689 C4orf48Q5BLP8 95 aa11.09□□□□□ -0.63
NFIL3-201ENST00000297689 FAT1Q14517 4588 aa11.09□□□□□ -0.63
NFIL3-201ENST00000297689 ACYP2P14621 99 aa11.08□□□□□ -0.63
NFIL3-201ENST00000297689 RETNLBQ9BQ08 111 aa11.07□□□□□ -0.64
NFIL3-201ENST00000297689 KRTAP10-4P60372 401 aaPredicted RBP11.06□□□□□ -0.64
NFIL3-201ENST00000297689 RPS29P62273 56 aaKnown RBP11.06□□□□□ -0.64
NFIL3-201ENST00000297689 PRR26Q8N8Z3 221 aa11.06□□□□□ -0.64
NFIL3-201ENST00000297689 LCA10Q71F78 164 aa11.02□□□□□ -0.65
NFIL3-201ENST00000297689 LINC00304Q8N9R0 145 aa10.99□□□□□ -0.65
NFIL3-201ENST00000297689 PKHD1L1Q86WI1 4243 aa10.97□□□□□ -0.65
NFIL3-201ENST00000297689 A6NED7 52 aa10.96□□□□□ -0.65
NFIL3-201ENST00000297689 EPPK1P58107 5090 aaKnown RBP10.92□□□□□ -0.66
NFIL3-201ENST00000297689 CDC42SE1Q9NRR8 79 aa10.92□□□□□ -0.66
NFIL3-201ENST00000297689 IGKV2D-30A0A075B6S6 120 aa10.91□□□□□ -0.66
NFIL3-201ENST00000297689 HSPG2P98160 4391 aa10.9□□□□□ -0.66
NFIL3-201ENST00000297689 SPINK7P58062 85 aa10.9□□□□□ -0.66
NFIL3-201ENST00000297689 ATP11AUNQ6ZP68 121 aa10.88□□□□□ -0.67
NFIL3-201ENST00000297689 RYR1P21817 5038 aa10.87□□□□□ -0.67
NFIL3-201ENST00000297689 KIAA1109Q2LD37 5005 aa10.82□□□□□ -0.68
NFIL3-201ENST00000297689 PMAIP1Q13794 54 aa10.81□□□□□ -0.68
NFIL3-201ENST00000297689 C7orf65Q6ZTY9 151 aa10.8□□□□□ -0.68
NFIL3-201ENST00000297689 C20orf166-AS1Q96NR2 134 aa10.78□□□□□ -0.68
NFIL3-201ENST00000297689 A8MUU9 505 aa10.78□□□□□ -0.68
NFIL3-201ENST00000297689 KRTAP17-1Q9BYP8 105 aa10.77□□□□□ -0.69
NFIL3-201ENST00000297689 SPTSSBQ8NFR3 76 aa10.76□□□□□ -0.69
NFIL3-201ENST00000297689 A6NN06 94 aa10.72□□□□□ -0.69
NFIL3-201ENST00000297689 A0A1B0GU69 56 aa10.71□□□□□ -0.69
NFIL3-201ENST00000297689 C9orf92A6NGG3 77 aa10.69□□□□□ -0.7
NFIL3-201ENST00000297689 Q5VSD8 79 aa10.69□□□□□ -0.7
NFIL3-201ENST00000297689 TNXBP22105 4242 aa10.66□□□□□ -0.7
NFIL3-201ENST00000297689 Q8N1X5 172 aa10.65□□□□□ -0.7
NFIL3-201ENST00000297689 LRP1Q07954 4544 aaKnown RBP10.65□□□□□ -0.7
NFIL3-201ENST00000297689 BIRC6Q9NR09 4857 aa10.65□□□□□ -0.7
NFIL3-201ENST00000297689 FLG2Q5D862 2391 aaPredicted RBP10.63□□□□□ -0.71
NFIL3-201ENST00000297689 SPATA8Q6RVD6 105 aa10.61□□□□□ -0.71
NFIL3-201ENST00000297689 KRTAP10-8P60410 259 aa10.6□□□□□ -0.71
NFIL3-201ENST00000297689 KTN1-AS1Q86SY8 53 aa10.59□□□□□ -0.71
NFIL3-201ENST00000297689 FAT3Q8TDW7 4589 aa10.59□□□□□ -0.71
NFIL3-201ENST00000297689 KRTAP3-1Q9BYR8 98 aa10.58□□□□□ -0.72
NFIL3-201ENST00000297689 UQCR11O14957 56 aa10.53□□□□□ -0.72
NFIL3-201ENST00000297689 MIR22HGQ0VDD5 57 aa10.48□□□□□ -0.73
NFIL3-201ENST00000297689 MYCBP2O75592 4640 aa10.47□□□□□ -0.73
NFIL3-201ENST00000297689 KRTAP4-5Q9BYR2 181 aa10.45□□□□□ -0.74
NFIL3-201ENST00000297689 HERC2O95714 4834 aa10.38□□□□□ -0.75
NFIL3-201ENST00000297689 MT1HL1P0DM35 61 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms