RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 H3BS24 57 aa5.91□□□□□ -1.46
TNFRSF11B-201ENST00000297350 SRRM2Q9UQ35 2752 aaKnown RBP5.91□□□□□ -1.46
TNFRSF11B-201ENST00000297350 LY6G6CO95867 125 aa5.91□□□□□ -1.46
TNFRSF11B-201ENST00000297350 NDUFS5O43920 106 aa5.9□□□□□ -1.46
TNFRSF11B-201ENST00000297350 DNAH2Q9P225 4427 aa5.9□□□□□ -1.47
TNFRSF11B-201ENST00000297350 HECTD4Q9Y4D8 3996 aa5.89□□□□□ -1.47
TNFRSF11B-201ENST00000297350 Q6ZSA8 131 aa5.88□□□□□ -1.47
TNFRSF11B-201ENST00000297350 COA5Q86WW8 74 aa5.88□□□□□ -1.47
TNFRSF11B-201ENST00000297350 ANAPC11Q9NYG5 84 aa5.88□□□□□ -1.47
TNFRSF11B-201ENST00000297350 FBN3Q75N90 2809 aa5.87□□□□□ -1.47
TNFRSF11B-201ENST00000297350 CIRBP-AS1Q8TBR5 109 aa5.87□□□□□ -1.47
TNFRSF11B-201ENST00000297350 Q8N9P0 234 aaPredicted RBP5.87□□□□□ -1.47
TNFRSF11B-201ENST00000297350 DNAH8Q96JB1 4490 aa5.86□□□□□ -1.47
TNFRSF11B-201ENST00000297350 KMT2AQ03164 3969 aa5.86□□□□□ -1.47
TNFRSF11B-201ENST00000297350 KRTAP13-3Q3SY46 172 aa5.84□□□□□ -1.47
TNFRSF11B-201ENST00000297350 PCOTHQ58A44 107 aa5.84□□□□□ -1.47
TNFRSF11B-201ENST00000297350 FRAS1Q86XX4 4008 aa5.84□□□□□ -1.47
TNFRSF11B-201ENST00000297350 PSPHP1O15172 72 aa5.84□□□□□ -1.48
TNFRSF11B-201ENST00000297350 KTN1-AS1Q86SY8 53 aa5.84□□□□□ -1.48
TNFRSF11B-201ENST00000297350 SPINK6Q6UWN8 80 aa5.83□□□□□ -1.48
TNFRSF11B-201ENST00000297350 A0A087X002 238 aa5.83□□□□□ -1.48
TNFRSF11B-201ENST00000297350 KRTAP10-2P60368 255 aa5.83□□□□□ -1.48
TNFRSF11B-201ENST00000297350 NOTCH2NLQ7Z3S9 236 aa5.83□□□□□ -1.48
TNFRSF11B-201ENST00000297350 A8MUN3 132 aa5.82□□□□□ -1.48
TNFRSF11B-201ENST00000297350 FAM229AH3BQW9 127 aa5.82□□□□□ -1.48
TNFRSF11B-201ENST00000297350 Q5VV11 94 aa5.82□□□□□ -1.48
TNFRSF11B-201ENST00000297350 LINC00313P59037 77 aa5.81□□□□□ -1.48
TNFRSF11B-201ENST00000297350 Q75L30 129 aa5.81□□□□□ -1.48
TNFRSF11B-201ENST00000297350 LINC01558Q9Y6Z2 57 aa5.79□□□□□ -1.48
TNFRSF11B-201ENST00000297350 PRR15LQ9BU68 103 aa5.79□□□□□ -1.48
TNFRSF11B-201ENST00000297350 KRTAP10-1P60331 282 aa5.78□□□□□ -1.48
TNFRSF11B-201ENST00000297350 KRTAP13-2Q52LG2 175 aa5.78□□□□□ -1.48
TNFRSF11B-201ENST00000297350 HRES1P13985 223 aa5.77□□□□□ -1.49
TNFRSF11B-201ENST00000297350 Q5W150 140 aa5.77□□□□□ -1.49
TNFRSF11B-201ENST00000297350 DNAH11Q96DT5 4516 aa5.77□□□□□ -1.49
TNFRSF11B-201ENST00000297350 CHKB-CPT1BH3BT56 60 aa5.77□□□□□ -1.49
TNFRSF11B-201ENST00000297350 ACYP2P14621 99 aa5.76□□□□□ -1.49
TNFRSF11B-201ENST00000297350 KRTAP1-4P0C5Y4 121 aa5.75□□□□□ -1.49
TNFRSF11B-201ENST00000297350 RPS29P62273 56 aaKnown RBP5.75□□□□□ -1.49
TNFRSF11B-201ENST00000297350 PRR26Q8N8Z3 221 aa5.75□□□□□ -1.49
TNFRSF11B-201ENST00000297350 DNAH5Q8TE73 4624 aa5.74□□□□□ -1.49
TNFRSF11B-201ENST00000297350 DMAC1Q96GE9 116 aa5.74□□□□□ -1.49
TNFRSF11B-201ENST00000297350 FAT2Q9NYQ8 4349 aa5.74□□□□□ -1.49
TNFRSF11B-201ENST00000297350 TGP01266 2768 aa5.74□□□□□ -1.49
TNFRSF11B-201ENST00000297350 SPINK1P00995 79 aa5.74□□□□□ -1.49
TNFRSF11B-201ENST00000297350 IGKV2-30P06310 120 aa5.73□□□□□ -1.49
TNFRSF11B-201ENST00000297350 KRTAP16-1A8MUX0 517 aa5.72□□□□□ -1.49
TNFRSF11B-201ENST00000297350 PKD1P98161 4303 aa5.71□□□□□ -1.5
TNFRSF11B-201ENST00000297350 SPAG11AQ6PDA7 123 aa5.7□□□□□ -1.5
TNFRSF11B-201ENST00000297350 A6NED7 52 aa5.7□□□□□ -1.5
TNFRSF11B-201ENST00000297350 A8MU10 97 aa5.7□□□□□ -1.5
TNFRSF11B-201ENST00000297350 ATP11AUNQ6ZP68 121 aa5.69□□□□□ -1.5
TNFRSF11B-201ENST00000297350 TYMSOSQ8TAI1 123 aa5.69□□□□□ -1.5
TNFRSF11B-201ENST00000297350 HYDINQ4G0P3 5121 aa5.69□□□□□ -1.5
TNFRSF11B-201ENST00000297350 SACSQ9NZJ4 4579 aa5.69□□□□□ -1.5
TNFRSF11B-201ENST00000297350 PLA2G1BP04054 148 aaKnown RBP5.69□□□□□ -1.5
TNFRSF11B-201ENST00000297350 CDC42SE1Q9NRR8 79 aa5.69□□□□□ -1.5
TNFRSF11B-201ENST00000297350 A0A1B0GVY2 172 aa5.65□□□□□ -1.5
TNFRSF11B-201ENST00000297350 SPTSSBQ8NFR3 76 aa5.65□□□□□ -1.5
TNFRSF11B-201ENST00000297350 LCA10Q71F78 164 aa5.65□□□□□ -1.51
TNFRSF11B-201ENST00000297350 LINC00304Q8N9R0 145 aa5.64□□□□□ -1.51
TNFRSF11B-201ENST00000297350 A6NN06 94 aa5.63□□□□□ -1.51
TNFRSF11B-201ENST00000297350 C7orf65Q6ZTY9 151 aa5.63□□□□□ -1.51
TNFRSF11B-201ENST00000297350 LRP1BQ9NZR2 4599 aa5.62□□□□□ -1.51
TNFRSF11B-201ENST00000297350 IGKV2D-30A0A075B6S6 120 aa5.6□□□□□ -1.51
TNFRSF11B-201ENST00000297350 RETNLBQ9BQ08 111 aa5.58□□□□□ -1.52
TNFRSF11B-201ENST00000297350 A0A0A0MQY5 61 aa5.56□□□□□ -1.52
TNFRSF11B-201ENST00000297350 A0A1B0GU69 56 aa5.56□□□□□ -1.52
TNFRSF11B-201ENST00000297350 J3QL48 77 aa5.56□□□□□ -1.52
TNFRSF11B-201ENST00000297350 SPINK7P58062 85 aa5.56□□□□□ -1.52
TNFRSF11B-201ENST00000297350 RYR2Q92736 4967 aa5.55□□□□□ -1.52
TNFRSF11B-201ENST00000297350 DYNC1H1Q14204 4646 aaKnown RBP5.54□□□□□ -1.52
TNFRSF11B-201ENST00000297350 VPS13BQ7Z7G8 4022 aa5.54□□□□□ -1.52
TNFRSF11B-201ENST00000297350 C20orf166-AS1Q96NR2 134 aa5.53□□□□□ -1.52
TNFRSF11B-201ENST00000297350 A8MUU9 505 aa5.52□□□□□ -1.53
TNFRSF11B-201ENST00000297350 LINC01554Q52M75 96 aa5.52□□□□□ -1.53
TNFRSF11B-201ENST00000297350 PKHD1P08F94 4074 aa5.5□□□□□ -1.53
TNFRSF11B-201ENST00000297350 KRTAP10-4P60372 401 aaPredicted RBP5.5□□□□□ -1.53
TNFRSF11B-201ENST00000297350 SPATA8Q6RVD6 105 aa5.49□□□□□ -1.53
TNFRSF11B-201ENST00000297350 UQCR11O14957 56 aa5.49□□□□□ -1.53
TNFRSF11B-201ENST00000297350 APOBP04114 4563 aaKnown RBP5.49□□□□□ -1.53
TNFRSF11B-201ENST00000297350 PKHD1L1Q86WI1 4243 aa5.47□□□□□ -1.53
TNFRSF11B-201ENST00000297350 SMR3BP02814 79 aaPredicted RBP5.45□□□□□ -1.54
TNFRSF11B-201ENST00000297350 PRAC1Q96KF2 57 aa5.44□□□□□ -1.54
TNFRSF11B-201ENST00000297350 MIR22HGQ0VDD5 57 aa5.44□□□□□ -1.54
TNFRSF11B-201ENST00000297350 KMT2CQ8NEZ4 4911 aaKnown RBP5.41□□□□□ -1.54
TNFRSF11B-201ENST00000297350 Q8N1X5 172 aa5.41□□□□□ -1.54
TNFRSF11B-201ENST00000297350 C9orf92A6NGG3 77 aa5.4□□□□□ -1.55
TNFRSF11B-201ENST00000297350 ADM2Q7Z4H4 148 aa5.36□□□□□ -1.55
TNFRSF11B-201ENST00000297350 COX6B2Q6YFQ2 88 aa5.34□□□□□ -1.56
TNFRSF11B-201ENST00000297350 KRTAP10-8P60410 259 aa5.32□□□□□ -1.56
TNFRSF11B-201ENST00000297350 Q5VSD8 79 aa5.32□□□□□ -1.56
TNFRSF11B-201ENST00000297350 KRTAP3-1Q9BYR8 98 aa5.32□□□□□ -1.56
TNFRSF11B-201ENST00000297350 FAT1Q14517 4588 aa5.31□□□□□ -1.56
TNFRSF11B-201ENST00000297350 HSPG2P98160 4391 aa5.31□□□□□ -1.56
TNFRSF11B-201ENST00000297350 RYR3Q15413 4870 aa5.29□□□□□ -1.56
TNFRSF11B-201ENST00000297350 FLG2Q5D862 2391 aaPredicted RBP5.29□□□□□ -1.56
TNFRSF11B-201ENST00000297350 A0A1B0GU33 70 aa5.27□□□□□ -1.57
TNFRSF11B-201ENST00000297350 RPL37P61927 97 aaKnown RBP5.27□□□□□ -1.57
TNFRSF11B-201ENST00000297350 RYR1P21817 5038 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms