RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 BRK1Q8WUW1 75 aa7.15□□□□□ -1.26
HMGB2-201ENST00000296503 IGLV5-48A0A075B6I7 105 aa7.15□□□□□ -1.27
HMGB2-201ENST00000296503 hDV103S1A0JD37 113 aa7.14□□□□□ -1.27
HMGB2-201ENST00000296503 FAM229BQ4G0N7 80 aa7.14□□□□□ -1.27
HMGB2-201ENST00000296503 ZNF706Q9Y5V0 76 aaPredicted RBP7.13□□□□□ -1.27
HMGB2-201ENST00000296503 ZCCHC13Q8WW36 166 aaKnown RBP7.13□□□□□ -1.27
HMGB2-201ENST00000296503 SPRR4Q96PI1 79 aa7.12□□□□□ -1.27
HMGB2-201ENST00000296503 CYP4F30PQ9H0H9 118 aa7.12□□□□□ -1.27
HMGB2-201ENST00000296503 KRTAP13-2Q52LG2 175 aa7.11□□□□□ -1.27
HMGB2-201ENST00000296503 Q6ZRX8 168 aa7.11□□□□□ -1.27
HMGB2-201ENST00000296503 Q9BRP9 147 aa7.09□□□□□ -1.27
HMGB2-201ENST00000296503 SEC61GP60059 68 aa7.09□□□□□ -1.28
HMGB2-201ENST00000296503 MPLKIPQ8TAP9 179 aa7.07□□□□□ -1.28
HMGB2-201ENST00000296503 HMCN2Q8NDA2 5059 aa7.06□□□□□ -1.28
HMGB2-201ENST00000296503 NDUFB1O75438 58 aa7.06□□□□□ -1.28
HMGB2-201ENST00000296503 LINC00304Q8N9R0 145 aa7.06□□□□□ -1.28
HMGB2-201ENST00000296503 DHRS4-AS1Q9P1J3 65 aa7.05□□□□□ -1.28
HMGB2-201ENST00000296503 Q8N377 158 aa7.04□□□□□ -1.28
HMGB2-201ENST00000296503 Q8N9L7 120 aa7.04□□□□□ -1.28
HMGB2-201ENST00000296503 LINC00483Q53H64 154 aa7.03□□□□□ -1.28
HMGB2-201ENST00000296503 C1orf64Q8NEQ6 169 aa7.03□□□□□ -1.28
HMGB2-201ENST00000296503 PMAIP1Q13794 54 aa7.02□□□□□ -1.28
HMGB2-201ENST00000296503 PRR4Q16378 134 aa7.02□□□□□ -1.28
HMGB2-201ENST00000296503 SMIM29Q86T20 159 aa7.02□□□□□ -1.28
HMGB2-201ENST00000296503 ST20-AS1Q8NBB2 130 aa7.02□□□□□ -1.28
HMGB2-201ENST00000296503 Q8NBF4 154 aa7.02□□□□□ -1.28
HMGB2-201ENST00000296503 IGLV9-49A0A0B4J1Y8 123 aa7.02□□□□□ -1.29
HMGB2-201ENST00000296503 C4orf48Q5BLP8 95 aa7.02□□□□□ -1.29
HMGB2-201ENST00000296503 A0A1W2PNM2 257 aa7□□□□□ -1.29
HMGB2-201ENST00000296503 H3BPC8 53 aa7□□□□□ -1.29
HMGB2-201ENST00000296503 SPAG11AQ6PDA7 123 aa7□□□□□ -1.29
HMGB2-201ENST00000296503 MOBPQ13875 183 aa6.99□□□□□ -1.29
HMGB2-201ENST00000296503 DSCR10P59022 87 aa6.98□□□□□ -1.29
HMGB2-201ENST00000296503 SSBP3-AS1Q7Z2R9 100 aa6.98□□□□□ -1.29
HMGB2-201ENST00000296503 SPANXA2-OT1Q8N9U9 137 aa6.98□□□□□ -1.29
HMGB2-201ENST00000296503 DEFB105AQ8NG35 78 aa6.98□□□□□ -1.29
HMGB2-201ENST00000296503 TRAV22A0A0B4J277 110 aa6.96□□□□□ -1.29
HMGB2-201ENST00000296503 RETNLBQ9BQ08 111 aa6.96□□□□□ -1.29
HMGB2-201ENST00000296503 HCG22E2RYF7 251 aa6.96□□□□□ -1.3
HMGB2-201ENST00000296503 SPRR1BP22528 89 aa6.94□□□□□ -1.3
HMGB2-201ENST00000296503 SPINK1P00995 79 aa6.94□□□□□ -1.3
HMGB2-201ENST00000296503 LIMD2Q9BT23 127 aa6.94□□□□□ -1.3
HMGB2-201ENST00000296503 MP68P56378 58 aa6.93□□□□□ -1.3
HMGB2-201ENST00000296503 LRP2P98164 4655 aa6.92□□□□□ -1.3
HMGB2-201ENST00000296503 LCE2DQ5TA82 110 aaPredicted RBP6.92□□□□□ -1.3
HMGB2-201ENST00000296503 CD164Q04900 197 aa6.92□□□□□ -1.3
HMGB2-201ENST00000296503 K7EQZ3 153 aa6.91□□□□□ -1.3
HMGB2-201ENST00000296503 IGLV8-61A0A075B6I0 122 aa6.9□□□□□ -1.3
HMGB2-201ENST00000296503 UBR4Q5T4S7 5183 aa6.9□□□□□ -1.3
HMGB2-201ENST00000296503 LPAP08519 4548 aa6.89□□□□□ -1.31
HMGB2-201ENST00000296503 IGLV7-46A0A075B6I9 117 aa6.89□□□□□ -1.31
HMGB2-201ENST00000296503 Q5VV11 94 aa6.87□□□□□ -1.31
HMGB2-201ENST00000296503 RPS29P62273 56 aaKnown RBP6.86□□□□□ -1.31
HMGB2-201ENST00000296503 Q8N9P0 234 aaPredicted RBP6.86□□□□□ -1.31
HMGB2-201ENST00000296503 LOC101927531A0A1B0GV80 90 aa6.85□□□□□ -1.31
HMGB2-201ENST00000296503 PSPHP1O15172 72 aa6.85□□□□□ -1.31
HMGB2-201ENST00000296503 A8MUN3 132 aa6.85□□□□□ -1.31
HMGB2-201ENST00000296503 ATP11AUNQ6ZP68 121 aa6.84□□□□□ -1.31
HMGB2-201ENST00000296503 LINC00208Q96KT6 92 aa6.84□□□□□ -1.31
HMGB2-201ENST00000296503 Q75L30 129 aa6.83□□□□□ -1.32
HMGB2-201ENST00000296503 TPRXLQ17RH7 258 aa6.81□□□□□ -1.32
HMGB2-201ENST00000296503 KTN1-AS1Q86SY8 53 aa6.81□□□□□ -1.32
HMGB2-201ENST00000296503 A0A0G2JQZ4 141 aa6.81□□□□□ -1.32
HMGB2-201ENST00000296503 NDUFS5O43920 106 aa6.81□□□□□ -1.32
HMGB2-201ENST00000296503 IGFL1Q6UW32 110 aa6.81□□□□□ -1.32
HMGB2-201ENST00000296503 H0Y9P7 68 aa6.79□□□□□ -1.32
HMGB2-201ENST00000296503 CHKB-CPT1BH3BT56 60 aa6.77□□□□□ -1.33
HMGB2-201ENST00000296503 A8MWP4 228 aa6.77□□□□□ -1.33
HMGB2-201ENST00000296503 CASC2Q6XLA1 102 aa6.77□□□□□ -1.33
HMGB2-201ENST00000296503 KRTAP13-3Q3SY46 172 aa6.75□□□□□ -1.33
HMGB2-201ENST00000296503 WFDC13Q8IUB5 93 aa6.75□□□□□ -1.33
HMGB2-201ENST00000296503 CDC42SE1Q9NRR8 79 aa6.75□□□□□ -1.33
HMGB2-201ENST00000296503 LINC00472Q9H8W2 130 aa6.74□□□□□ -1.33
HMGB2-201ENST00000296503 LINC01558Q9Y6Z2 57 aa6.74□□□□□ -1.33
HMGB2-201ENST00000296503 A0A087WSZ3 146 aa6.73□□□□□ -1.33
HMGB2-201ENST00000296503 TP53AIP1Q9HCN2 124 aa6.73□□□□□ -1.33
HMGB2-201ENST00000296503 A6NN06 94 aa6.73□□□□□ -1.33
HMGB2-201ENST00000296503 PRR15LQ9BU68 103 aa6.73□□□□□ -1.33
HMGB2-201ENST00000296503 ASB16-AS1Q495Z4 193 aa6.72□□□□□ -1.33
HMGB2-201ENST00000296503 LCA10Q71F78 164 aa6.71□□□□□ -1.34
HMGB2-201ENST00000296503 COA5Q86WW8 74 aa6.71□□□□□ -1.34
HMGB2-201ENST00000296503 RNF213Q63HN8 5207 aa6.7□□□□□ -1.34
HMGB2-201ENST00000296503 A6NED7 52 aa6.67□□□□□ -1.34
HMGB2-201ENST00000296503 RBM12B-AS1Q9P1G2 102 aa6.67□□□□□ -1.34
HMGB2-201ENST00000296503 MMP24-AS1A0A0U1RRL7 71 aa6.66□□□□□ -1.34
HMGB2-201ENST00000296503 C9orf92A6NGG3 77 aa6.66□□□□□ -1.34
HMGB2-201ENST00000296503 A8MU10 97 aa6.66□□□□□ -1.34
HMGB2-201ENST00000296503 DEFB116Q30KQ4 102 aa6.66□□□□□ -1.34
HMGB2-201ENST00000296503 C7orf65Q6ZTY9 151 aa6.64□□□□□ -1.35
HMGB2-201ENST00000296503 XP32Q5T750 250 aa6.64□□□□□ -1.35
HMGB2-201ENST00000296503 SEC61BP60468 96 aaKnown RBP6.63□□□□□ -1.35
HMGB2-201ENST00000296503 SPTSSBQ8NFR3 76 aa6.61□□□□□ -1.35
HMGB2-201ENST00000296503 MUC17Q685J3 4493 aa6.61□□□□□ -1.35
HMGB2-201ENST00000296503 MUC2Q02817 5179 aa6.58□□□□□ -1.36
HMGB2-201ENST00000296503 Q96NJ1 140 aa6.56□□□□□ -1.36
HMGB2-201ENST00000296503 C8orf17Q9NRJ1 99 aa6.56□□□□□ -1.36
HMGB2-201ENST00000296503 HRES1P13985 223 aa6.54□□□□□ -1.36
HMGB2-201ENST00000296503 PCOTHQ58A44 107 aa6.53□□□□□ -1.36
HMGB2-201ENST00000296503 A0A1B0GVX0 72 aa6.51□□□□□ -1.37
HMGB2-201ENST00000296503 KRTAP4-1Q9BYQ7 146 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms