RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 MPLKIPQ8TAP9 179 aa6.91□□□□□ -1.3
RHO-201ENST00000296271 C8orf17Q9NRJ1 99 aa6.91□□□□□ -1.3
RHO-201ENST00000296271 MP68P56378 58 aa6.9□□□□□ -1.3
RHO-201ENST00000296271 TRAV22A0A0B4J277 110 aa6.89□□□□□ -1.31
RHO-201ENST00000296271 C1orf64Q8NEQ6 169 aa6.89□□□□□ -1.31
RHO-201ENST00000296271 A0A1B0GVX0 72 aa6.89□□□□□ -1.31
RHO-201ENST00000296271 KRTAP13-2Q52LG2 175 aa6.89□□□□□ -1.31
RHO-201ENST00000296271 NDUFS5O43920 106 aa6.88□□□□□ -1.31
RHO-201ENST00000296271 Q6ZSA8 131 aa6.88□□□□□ -1.31
RHO-201ENST00000296271 ATP5EP56381 51 aaPredicted RBP6.88□□□□□ -1.31
RHO-201ENST00000296271 SMIM26A0A096LP01 95 aa6.87□□□□□ -1.31
RHO-201ENST00000296271 ASB16-AS1Q495Z4 193 aa6.87□□□□□ -1.31
RHO-201ENST00000296271 PCOTHQ58A44 107 aa6.85□□□□□ -1.31
RHO-201ENST00000296271 CDK2AP2O75956 126 aa6.84□□□□□ -1.31
RHO-201ENST00000296271 FAT1Q14517 4588 aa6.83□□□□□ -1.32
RHO-201ENST00000296271 KRTAP1-4P0C5Y4 121 aa6.81□□□□□ -1.32
RHO-201ENST00000296271 DYNC1H1Q14204 4646 aaKnown RBP6.81□□□□□ -1.32
RHO-201ENST00000296271 MRPL34Q9BQ48 92 aaKnown RBP6.81□□□□□ -1.32
RHO-201ENST00000296271 Q5W150 140 aa6.8□□□□□ -1.32
RHO-201ENST00000296271 CD164Q04900 197 aa6.8□□□□□ -1.32
RHO-201ENST00000296271 SMR3BP02814 79 aaPredicted RBP6.79□□□□□ -1.32
RHO-201ENST00000296271 RETNLBQ9BQ08 111 aa6.79□□□□□ -1.32
RHO-201ENST00000296271 SSBP3-AS1Q7Z2R9 100 aa6.78□□□□□ -1.32
RHO-201ENST00000296271 CYP4F30PQ9H0H9 118 aa6.78□□□□□ -1.32
RHO-201ENST00000296271 PMAIP1Q13794 54 aa6.77□□□□□ -1.33
RHO-201ENST00000296271 KMT2CQ8NEZ4 4911 aaKnown RBP6.77□□□□□ -1.33
RHO-201ENST00000296271 H3BPC8 53 aa6.74□□□□□ -1.33
RHO-201ENST00000296271 PLA2G1BP04054 148 aaKnown RBP6.74□□□□□ -1.33
RHO-201ENST00000296271 TP53AIP1Q9HCN2 124 aa6.74□□□□□ -1.33
RHO-201ENST00000296271 BRK1Q8WUW1 75 aa6.73□□□□□ -1.33
RHO-201ENST00000296271 PSPHP1O15172 72 aa6.72□□□□□ -1.33
RHO-201ENST00000296271 APOBP04114 4563 aaKnown RBP6.72□□□□□ -1.33
RHO-201ENST00000296271 PRR26Q8N8Z3 221 aa6.71□□□□□ -1.34
RHO-201ENST00000296271 SPANXA2-OT1Q8N9U9 137 aa6.71□□□□□ -1.34
RHO-201ENST00000296271 KRTAP13-3Q3SY46 172 aa6.7□□□□□ -1.34
RHO-201ENST00000296271 Q8N9P0 234 aaPredicted RBP6.7□□□□□ -1.34
RHO-201ENST00000296271 LINC00313P59037 77 aa6.69□□□□□ -1.34
RHO-201ENST00000296271 IGLV7-46A0A075B6I9 117 aa6.69□□□□□ -1.34
RHO-201ENST00000296271 RYR2Q92736 4967 aa6.68□□□□□ -1.34
RHO-201ENST00000296271 TYMSOSQ8TAI1 123 aa6.68□□□□□ -1.34
RHO-201ENST00000296271 COA5Q86WW8 74 aa6.67□□□□□ -1.34
RHO-201ENST00000296271 H3BS24 57 aa6.67□□□□□ -1.34
RHO-201ENST00000296271 A8MUN3 132 aa6.66□□□□□ -1.34
RHO-201ENST00000296271 KRTAP16-1A8MUX0 517 aa6.65□□□□□ -1.34
RHO-201ENST00000296271 Q1T7F1 81 aa6.65□□□□□ -1.34
RHO-201ENST00000296271 A0A1B0GVY2 172 aa6.64□□□□□ -1.35
RHO-201ENST00000296271 A8MU10 97 aa6.63□□□□□ -1.35
RHO-201ENST00000296271 C8orf87E5RJ46 101 aa6.63□□□□□ -1.35
RHO-201ENST00000296271 HRES1P13985 223 aa6.63□□□□□ -1.35
RHO-201ENST00000296271 PKHD1L1Q86WI1 4243 aa6.6□□□□□ -1.35
RHO-201ENST00000296271 KRTAP10-4P60372 401 aaPredicted RBP6.6□□□□□ -1.35
RHO-201ENST00000296271 LOC101927531A0A1B0GV80 90 aa6.59□□□□□ -1.35
RHO-201ENST00000296271 LIMD2Q9BT23 127 aa6.59□□□□□ -1.36
RHO-201ENST00000296271 LRP1Q07954 4544 aaKnown RBP6.59□□□□□ -1.36
RHO-201ENST00000296271 SPAG11AQ6PDA7 123 aa6.58□□□□□ -1.36
RHO-201ENST00000296271 LINC00304Q8N9R0 145 aa6.58□□□□□ -1.36
RHO-201ENST00000296271 Q5VV11 94 aa6.57□□□□□ -1.36
RHO-201ENST00000296271 PRR15LQ9BU68 103 aa6.57□□□□□ -1.36
RHO-201ENST00000296271 SPINK1P00995 79 aa6.56□□□□□ -1.36
RHO-201ENST00000296271 IGKV2D-30A0A075B6S6 120 aa6.56□□□□□ -1.36
RHO-201ENST00000296271 IGKV2-30P06310 120 aa6.56□□□□□ -1.36
RHO-201ENST00000296271 FAM229AH3BQW9 127 aa6.55□□□□□ -1.36
RHO-201ENST00000296271 RBM12B-AS1Q9P1G2 102 aa6.55□□□□□ -1.36
RHO-201ENST00000296271 RYR3Q15413 4870 aa6.54□□□□□ -1.36
RHO-201ENST00000296271 C9orf92A6NGG3 77 aa6.54□□□□□ -1.36
RHO-201ENST00000296271 FLG2Q5D862 2391 aaPredicted RBP6.5□□□□□ -1.37
RHO-201ENST00000296271 HSPG2P98160 4391 aa6.5□□□□□ -1.37
RHO-201ENST00000296271 CHKB-CPT1BH3BT56 60 aa6.5□□□□□ -1.37
RHO-201ENST00000296271 KRTAP17-1Q9BYP8 105 aa6.48□□□□□ -1.37
RHO-201ENST00000296271 DMAC1Q96GE9 116 aa6.46□□□□□ -1.38
RHO-201ENST00000296271 DMBT1Q9UGM3 2413 aaPredicted RBP6.45□□□□□ -1.38
RHO-201ENST00000296271 TNXBP22105 4242 aa6.45□□□□□ -1.38
RHO-201ENST00000296271 ACYP2P14621 99 aa6.44□□□□□ -1.38
RHO-201ENST00000296271 MYCBP2O75592 4640 aa6.44□□□□□ -1.38
RHO-201ENST00000296271 LINC01558Q9Y6Z2 57 aa6.43□□□□□ -1.38
RHO-201ENST00000296271 Q8N1X5 172 aa6.43□□□□□ -1.38
RHO-201ENST00000296271 KTN1-AS1Q86SY8 53 aa6.42□□□□□ -1.38
RHO-201ENST00000296271 LCA10Q71F78 164 aa6.42□□□□□ -1.38
RHO-201ENST00000296271 SPINK7P58062 85 aa6.41□□□□□ -1.38
RHO-201ENST00000296271 KIAA1109Q2LD37 5005 aa6.41□□□□□ -1.38
RHO-201ENST00000296271 A6NED7 52 aa6.41□□□□□ -1.38
RHO-201ENST00000296271 Q75L30 129 aa6.4□□□□□ -1.38
RHO-201ENST00000296271 RPS29P62273 56 aaKnown RBP6.4□□□□□ -1.39
RHO-201ENST00000296271 FAT3Q8TDW7 4589 aa6.4□□□□□ -1.39
RHO-201ENST00000296271 C7orf65Q6ZTY9 151 aa6.39□□□□□ -1.39
RHO-201ENST00000296271 Q5VSD8 79 aa6.35□□□□□ -1.39
RHO-201ENST00000296271 RYR1P21817 5038 aa6.35□□□□□ -1.39
RHO-201ENST00000296271 SPTSSBQ8NFR3 76 aa6.34□□□□□ -1.39
RHO-201ENST00000296271 A8MUU9 505 aa6.33□□□□□ -1.4
RHO-201ENST00000296271 C20orf166-AS1Q96NR2 134 aa6.33□□□□□ -1.4
RHO-201ENST00000296271 EPPK1P58107 5090 aaKnown RBP6.33□□□□□ -1.4
RHO-201ENST00000296271 KRTAP3-1Q9BYR8 98 aa6.3□□□□□ -1.4
RHO-201ENST00000296271 KRTAP10-8P60410 259 aa6.29□□□□□ -1.4
RHO-201ENST00000296271 A0A1B0GU69 56 aa6.26□□□□□ -1.41
RHO-201ENST00000296271 CDC42SE1Q9NRR8 79 aa6.26□□□□□ -1.41
RHO-201ENST00000296271 ATP11AUNQ6ZP68 121 aa6.23□□□□□ -1.41
RHO-201ENST00000296271 LPAP08519 4548 aa6.22□□□□□ -1.41
RHO-201ENST00000296271 MT1HL1P0DM35 61 aa6.18□□□□□ -1.42
RHO-201ENST00000296271 A6NN06 94 aa6.18□□□□□ -1.42
RHO-201ENST00000296271 ABCA13Q86UQ4 5058 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms