RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 NDUFC1O43677 76 aa5.4□□□□□ -1.54
PDPN-201ENST00000294489 CASC2Q6XLA1 102 aa5.4□□□□□ -1.54
PDPN-201ENST00000294489 Q96NJ1 140 aa5.4□□□□□ -1.54
PDPN-201ENST00000294489 FAM229BQ4G0N7 80 aa5.4□□□□□ -1.55
PDPN-201ENST00000294489 KRTAP10-4P60372 401 aaPredicted RBP5.39□□□□□ -1.55
PDPN-201ENST00000294489 C8orf87E5RJ46 101 aa5.39□□□□□ -1.55
PDPN-201ENST00000294489 H7BZZ5 65 aa5.39□□□□□ -1.55
PDPN-201ENST00000294489 CDK2AP2O75956 126 aa5.39□□□□□ -1.55
PDPN-201ENST00000294489 PKHD1L1Q86WI1 4243 aa5.39□□□□□ -1.55
PDPN-201ENST00000294489 KRTAP1-4P0C5Y4 121 aa5.39□□□□□ -1.55
PDPN-201ENST00000294489 FP248Q71RG6 208 aaPredicted RBP5.39□□□□□ -1.55
PDPN-201ENST00000294489 KRTAP29-1A8MX34 341 aaPredicted RBP5.38□□□□□ -1.55
PDPN-201ENST00000294489 MPLKIPQ8TAP9 179 aa5.37□□□□□ -1.55
PDPN-201ENST00000294489 RYR3Q15413 4870 aa5.37□□□□□ -1.55
PDPN-201ENST00000294489 A0A0A0MQY5 61 aa5.37□□□□□ -1.55
PDPN-201ENST00000294489 A0A087X002 238 aa5.36□□□□□ -1.55
PDPN-201ENST00000294489 SPINK6Q6UWN8 80 aa5.36□□□□□ -1.55
PDPN-201ENST00000294489 MMP24-AS1A0A0U1RRL7 71 aa5.36□□□□□ -1.55
PDPN-201ENST00000294489 hDV103S1A0JD37 113 aa5.35□□□□□ -1.55
PDPN-201ENST00000294489 KRTAP13-2Q52LG2 175 aa5.35□□□□□ -1.55
PDPN-201ENST00000294489 A0A1B0GVX0 72 aa5.34□□□□□ -1.55
PDPN-201ENST00000294489 IGHV6-1A0A0B4J1U7 121 aa5.34□□□□□ -1.55
PDPN-201ENST00000294489 MP68P56378 58 aa5.34□□□□□ -1.56
PDPN-201ENST00000294489 C8orf17Q9NRJ1 99 aa5.34□□□□□ -1.56
PDPN-201ENST00000294489 PLA2G1BP04054 148 aaKnown RBP5.32□□□□□ -1.56
PDPN-201ENST00000294489 ASB16-AS1Q495Z4 193 aa5.32□□□□□ -1.56
PDPN-201ENST00000294489 ATP5EP56381 51 aaPredicted RBP5.32□□□□□ -1.56
PDPN-201ENST00000294489 KTN1-AS1Q86SY8 53 aa5.31□□□□□ -1.56
PDPN-201ENST00000294489 ZCCHC13Q8WW36 166 aaKnown RBP5.3□□□□□ -1.56
PDPN-201ENST00000294489 TP53AIP1Q9HCN2 124 aa5.3□□□□□ -1.56
PDPN-201ENST00000294489 SMR3BP02814 79 aaPredicted RBP5.3□□□□□ -1.56
PDPN-201ENST00000294489 TYMSOSQ8TAI1 123 aa5.3□□□□□ -1.56
PDPN-201ENST00000294489 LIMD2Q9BT23 127 aa5.3□□□□□ -1.56
PDPN-201ENST00000294489 H0Y9P7 68 aa5.29□□□□□ -1.56
PDPN-201ENST00000294489 H3BPC8 53 aa5.29□□□□□ -1.56
PDPN-201ENST00000294489 LINC00208Q96KT6 92 aa5.28□□□□□ -1.56
PDPN-201ENST00000294489 MRPL34Q9BQ48 92 aaKnown RBP5.28□□□□□ -1.56
PDPN-201ENST00000294489 NDUFS5O43920 106 aa5.28□□□□□ -1.56
PDPN-201ENST00000294489 TRAV22A0A0B4J277 110 aa5.28□□□□□ -1.56
PDPN-201ENST00000294489 HSPG2P98160 4391 aa5.26□□□□□ -1.57
PDPN-201ENST00000294489 NOTCH2NLQ7Z3S9 236 aa5.26□□□□□ -1.57
PDPN-201ENST00000294489 SPINK1P00995 79 aa5.26□□□□□ -1.57
PDPN-201ENST00000294489 RPS29P62273 56 aaKnown RBP5.25□□□□□ -1.57
PDPN-201ENST00000294489 C1orf64Q8NEQ6 169 aa5.25□□□□□ -1.57
PDPN-201ENST00000294489 FAT1Q14517 4588 aa5.24□□□□□ -1.57
PDPN-201ENST00000294489 RYR1P21817 5038 aa5.23□□□□□ -1.57
PDPN-201ENST00000294489 A8MUN3 132 aa5.23□□□□□ -1.57
PDPN-201ENST00000294489 LINC00313P59037 77 aa5.23□□□□□ -1.57
PDPN-201ENST00000294489 SPAG11AQ6PDA7 123 aa5.23□□□□□ -1.57
PDPN-201ENST00000294489 LINC00304Q8N9R0 145 aa5.22□□□□□ -1.57
PDPN-201ENST00000294489 FAM229AH3BQW9 127 aa5.22□□□□□ -1.57
PDPN-201ENST00000294489 PRR4Q16378 134 aa5.22□□□□□ -1.57
PDPN-201ENST00000294489 KRTAP17-1Q9BYP8 105 aa5.21□□□□□ -1.57
PDPN-201ENST00000294489 SPTSSBQ8NFR3 76 aa5.2□□□□□ -1.58
PDPN-201ENST00000294489 Q5VSD8 79 aa5.19□□□□□ -1.58
PDPN-201ENST00000294489 SPANXA2-OT1Q8N9U9 137 aa5.19□□□□□ -1.58
PDPN-201ENST00000294489 CYP4F30PQ9H0H9 118 aa5.18□□□□□ -1.58
PDPN-201ENST00000294489 LCA10Q71F78 164 aa5.17□□□□□ -1.58
PDPN-201ENST00000294489 Q8N9P0 234 aaPredicted RBP5.16□□□□□ -1.58
PDPN-201ENST00000294489 LOC101927531A0A1B0GV80 90 aa5.15□□□□□ -1.58
PDPN-201ENST00000294489 PSPHP1O15172 72 aa5.15□□□□□ -1.58
PDPN-201ENST00000294489 KRTAP10-8P60410 259 aa5.15□□□□□ -1.58
PDPN-201ENST00000294489 Q8N1X5 172 aa5.15□□□□□ -1.58
PDPN-201ENST00000294489 EPPK1P58107 5090 aaKnown RBP5.15□□□□□ -1.59
PDPN-201ENST00000294489 TNXBP22105 4242 aa5.15□□□□□ -1.59
PDPN-201ENST00000294489 PCOTHQ58A44 107 aa5.14□□□□□ -1.59
PDPN-201ENST00000294489 Q5W150 140 aa5.14□□□□□ -1.59
PDPN-201ENST00000294489 KRTAP16-1A8MUX0 517 aa5.13□□□□□ -1.59
PDPN-201ENST00000294489 IGLV7-46A0A075B6I9 117 aa5.12□□□□□ -1.59
PDPN-201ENST00000294489 KRTAP13-3Q3SY46 172 aa5.12□□□□□ -1.59
PDPN-201ENST00000294489 FAT3Q8TDW7 4589 aa5.11□□□□□ -1.59
PDPN-201ENST00000294489 C7orf65Q6ZTY9 151 aa5.1□□□□□ -1.59
PDPN-201ENST00000294489 KIAA1109Q2LD37 5005 aa5.1□□□□□ -1.59
PDPN-201ENST00000294489 RETNLBQ9BQ08 111 aa5.09□□□□□ -1.59
PDPN-201ENST00000294489 A8MU10 97 aa5.08□□□□□ -1.6
PDPN-201ENST00000294489 LINC01554Q52M75 96 aa5.08□□□□□ -1.6
PDPN-201ENST00000294489 MT1HL1P0DM35 61 aa5.07□□□□□ -1.6
PDPN-201ENST00000294489 LRP1Q07954 4544 aaKnown RBP5.06□□□□□ -1.6
PDPN-201ENST00000294489 IGKV2-30P06310 120 aa5.06□□□□□ -1.6
PDPN-201ENST00000294489 COA5Q86WW8 74 aa5.04□□□□□ -1.6
PDPN-201ENST00000294489 FLG2Q5D862 2391 aaPredicted RBP5.04□□□□□ -1.6
PDPN-201ENST00000294489 ATP11AUNQ6ZP68 121 aa5.03□□□□□ -1.6
PDPN-201ENST00000294489 C9orf92A6NGG3 77 aa5.03□□□□□ -1.6
PDPN-201ENST00000294489 CHKB-CPT1BH3BT56 60 aa5.03□□□□□ -1.6
PDPN-201ENST00000294489 IGKV2D-30A0A075B6S6 120 aa5.02□□□□□ -1.61
PDPN-201ENST00000294489 HRES1P13985 223 aa5.02□□□□□ -1.61
PDPN-201ENST00000294489 Q1T7F1 81 aa5.01□□□□□ -1.61
PDPN-201ENST00000294489 A6NN06 94 aa5□□□□□ -1.61
PDPN-201ENST00000294489 KRTAP4-5Q9BYR2 181 aa5□□□□□ -1.61
PDPN-201ENST00000294489 C20orf166-AS1Q96NR2 134 aa5□□□□□ -1.61
PDPN-201ENST00000294489 A8MUU9 505 aa4.99□□□□□ -1.61
PDPN-201ENST00000294489 ACYP2P14621 99 aa4.99□□□□□ -1.61
PDPN-201ENST00000294489 DMAC1Q96GE9 116 aa4.98□□□□□ -1.61
PDPN-201ENST00000294489 PRAC1Q96KF2 57 aa4.98□□□□□ -1.61
PDPN-201ENST00000294489 BIRC6Q9NR09 4857 aa4.97□□□□□ -1.61
PDPN-201ENST00000294489 MYCBP2O75592 4640 aa4.96□□□□□ -1.62
PDPN-201ENST00000294489 A6NED7 52 aa4.95□□□□□ -1.62
PDPN-201ENST00000294489 HERC2O95714 4834 aa4.95□□□□□ -1.62
PDPN-201ENST00000294489 Q75L30 129 aa4.94□□□□□ -1.62
PDPN-201ENST00000294489 J3QL48 77 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms