RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 A0A0G2JQZ4 141 aa10.4□□□□□ -0.74
CCDC78-201ENST00000293889 SSBP3-AS1Q7Z2R9 100 aa10.4□□□□□ -0.74
CCDC78-201ENST00000293889 KRTAP10-8P60410 259 aa10.4□□□□□ -0.75
CCDC78-201ENST00000293889 Q8N9L7 120 aa10.4□□□□□ -0.75
CCDC78-201ENST00000293889 SERP1Q9Y6X1 66 aa10.4□□□□□ -0.75
CCDC78-201ENST00000293889 ATP5EP56381 51 aaPredicted RBP10.39□□□□□ -0.75
CCDC78-201ENST00000293889 IGFL1Q6UW32 110 aa10.38□□□□□ -0.75
CCDC78-201ENST00000293889 TNXBP22105 4242 aa10.38□□□□□ -0.75
CCDC78-201ENST00000293889 TMEM254Q8TBM7 123 aa10.37□□□□□ -0.75
CCDC78-201ENST00000293889 SNURFQ9Y675 71 aa10.36□□□□□ -0.75
CCDC78-201ENST00000293889 A0A0U1RQV1 116 aa10.36□□□□□ -0.75
CCDC78-201ENST00000293889 DSCR10P59022 87 aa10.35□□□□□ -0.75
CCDC78-201ENST00000293889 LINC00304Q8N9R0 145 aa10.31□□□□□ -0.76
CCDC78-201ENST00000293889 HRCT1Q6UXD1 115 aa10.3□□□□□ -0.76
CCDC78-201ENST00000293889 HERC1Q15751 4861 aa10.29□□□□□ -0.76
CCDC78-201ENST00000293889 Q5XG85 94 aa10.29□□□□□ -0.76
CCDC78-201ENST00000293889 C4orf48Q5BLP8 95 aa10.28□□□□□ -0.76
CCDC78-201ENST00000293889 CD164Q04900 197 aa10.27□□□□□ -0.77
CCDC78-201ENST00000293889 SPAG11AQ6PDA7 123 aa10.25□□□□□ -0.77
CCDC78-201ENST00000293889 K7EQZ3 153 aa10.25□□□□□ -0.77
CCDC78-201ENST00000293889 SPINK1P00995 79 aa10.23□□□□□ -0.77
CCDC78-201ENST00000293889 C5orf47Q569G3 176 aa10.23□□□□□ -0.77
CCDC78-201ENST00000293889 ZCCHC13Q8WW36 166 aaKnown RBP10.22□□□□□ -0.77
CCDC78-201ENST00000293889 HCG22E2RYF7 251 aa10.22□□□□□ -0.77
CCDC78-201ENST00000293889 SMIM26A0A096LP01 95 aa10.21□□□□□ -0.78
CCDC78-201ENST00000293889 A0A087WSZ3 146 aa10.18□□□□□ -0.78
CCDC78-201ENST00000293889 RPS29P62273 56 aaKnown RBP10.17□□□□□ -0.78
CCDC78-201ENST00000293889 C4orf26Q17RF5 130 aa10.15□□□□□ -0.78
CCDC78-201ENST00000293889 LINC00472Q9H8W2 130 aa10.15□□□□□ -0.79
CCDC78-201ENST00000293889 LIMD2Q9BT23 127 aa10.14□□□□□ -0.79
CCDC78-201ENST00000293889 FP248Q71RG6 208 aaPredicted RBP10.11□□□□□ -0.79
CCDC78-201ENST00000293889 PRR15Q8IV56 129 aa10.11□□□□□ -0.79
CCDC78-201ENST00000293889 A8MWP4 228 aa10.09□□□□□ -0.79
CCDC78-201ENST00000293889 ASB16-AS1Q495Z4 193 aa10.08□□□□□ -0.8
CCDC78-201ENST00000293889 H3BPC8 53 aa10.07□□□□□ -0.8
CCDC78-201ENST00000293889 C1orf195Q5TG92 126 aa10.06□□□□□ -0.8
CCDC78-201ENST00000293889 RETNLBQ9BQ08 111 aa10.06□□□□□ -0.8
CCDC78-201ENST00000293889 CYP4F30PQ9H0H9 118 aa10.06□□□□□ -0.8
CCDC78-201ENST00000293889 DEFB116Q30KQ4 102 aa10.05□□□□□ -0.8
CCDC78-201ENST00000293889 NDUFB1O75438 58 aa10.04□□□□□ -0.8
CCDC78-201ENST00000293889 Q96NJ1 140 aa10.04□□□□□ -0.8
CCDC78-201ENST00000293889 WFDC13Q8IUB5 93 aa10.03□□□□□ -0.8
CCDC78-201ENST00000293889 hDV103S1A0JD37 113 aa10.02□□□□□ -0.81
CCDC78-201ENST00000293889 MP68P56378 58 aa10.02□□□□□ -0.81
CCDC78-201ENST00000293889 CASC2Q6XLA1 102 aa10.02□□□□□ -0.81
CCDC78-201ENST00000293889 HMCN2Q8NDA2 5059 aa10.01□□□□□ -0.81
CCDC78-201ENST00000293889 TRAV22A0A0B4J277 110 aa9.98□□□□□ -0.81
CCDC78-201ENST00000293889 MMP24-AS1A0A0U1RRL7 71 aa9.97□□□□□ -0.81
CCDC78-201ENST00000293889 SPANXA2-OT1Q8N9U9 137 aa9.96□□□□□ -0.82
CCDC78-201ENST00000293889 C1orf64Q8NEQ6 169 aa9.93□□□□□ -0.82
CCDC78-201ENST00000293889 H0Y9P7 68 aa9.93□□□□□ -0.82
CCDC78-201ENST00000293889 PRR4Q16378 134 aa9.93□□□□□ -0.82
CCDC78-201ENST00000293889 LINC00208Q96KT6 92 aa9.91□□□□□ -0.82
CCDC78-201ENST00000293889 IGLV7-46A0A075B6I9 117 aa9.89□□□□□ -0.83
CCDC78-201ENST00000293889 Q1T7F1 81 aa9.89□□□□□ -0.83
CCDC78-201ENST00000293889 TP53AIP1Q9HCN2 124 aa9.89□□□□□ -0.83
CCDC78-201ENST00000293889 PRO0628Q9UI54 55 aa9.86□□□□□ -0.83
CCDC78-201ENST00000293889 C8orf17Q9NRJ1 99 aa9.85□□□□□ -0.83
CCDC78-201ENST00000293889 LPAP08519 4548 aa9.84□□□□□ -0.83
CCDC78-201ENST00000293889 A0A1B0GVX0 72 aa9.83□□□□□ -0.84
CCDC78-201ENST00000293889 IGHV6-1A0A0B4J1U7 121 aa9.82□□□□□ -0.84
CCDC78-201ENST00000293889 MPLKIPQ8TAP9 179 aa9.81□□□□□ -0.84
CCDC78-201ENST00000293889 LRP2P98164 4655 aa9.8□□□□□ -0.84
CCDC78-201ENST00000293889 KRTAP13-3Q3SY46 172 aa9.79□□□□□ -0.84
CCDC78-201ENST00000293889 C9orf92A6NGG3 77 aa9.78□□□□□ -0.84
CCDC78-201ENST00000293889 NOTCH2NLQ7Z3S9 236 aa9.78□□□□□ -0.84
CCDC78-201ENST00000293889 V9GYY9 64 aa9.77□□□□□ -0.85
CCDC78-201ENST00000293889 LINC00313P59037 77 aa9.76□□□□□ -0.85
CCDC78-201ENST00000293889 TPRXLQ17RH7 258 aa9.76□□□□□ -0.85
CCDC78-201ENST00000293889 MRPL34Q9BQ48 92 aaKnown RBP9.75□□□□□ -0.85
CCDC78-201ENST00000293889 C8orf87E5RJ46 101 aa9.74□□□□□ -0.85
CCDC78-201ENST00000293889 UBR4Q5T4S7 5183 aa9.7□□□□□ -0.86
CCDC78-201ENST00000293889 KRTAP16-1A8MUX0 517 aa9.67□□□□□ -0.86
CCDC78-201ENST00000293889 XP32Q5T750 250 aa9.67□□□□□ -0.86
CCDC78-201ENST00000293889 BRK1Q8WUW1 75 aa9.64□□□□□ -0.87
CCDC78-201ENST00000293889 Q8N9P0 234 aaPredicted RBP9.64□□□□□ -0.87
CCDC78-201ENST00000293889 LOC101927531A0A1B0GV80 90 aa9.61□□□□□ -0.87
CCDC78-201ENST00000293889 COA5Q86WW8 74 aa9.61□□□□□ -0.87
CCDC78-201ENST00000293889 NDUFS5O43920 106 aa9.6□□□□□ -0.87
CCDC78-201ENST00000293889 C20orf166-AS1Q96NR2 134 aa9.59□□□□□ -0.87
CCDC78-201ENST00000293889 A8MUU9 505 aa9.58□□□□□ -0.88
CCDC78-201ENST00000293889 PCOTHQ58A44 107 aa9.57□□□□□ -0.88
CCDC78-201ENST00000293889 Q5VV11 94 aa9.56□□□□□ -0.88
CCDC78-201ENST00000293889 Q75L30 129 aa9.56□□□□□ -0.88
CCDC78-201ENST00000293889 PSPHP1O15172 72 aa9.55□□□□□ -0.88
CCDC78-201ENST00000293889 RPL37P61927 97 aaKnown RBP9.55□□□□□ -0.88
CCDC78-201ENST00000293889 A8MUN3 132 aa9.54□□□□□ -0.88
CCDC78-201ENST00000293889 Q5W150 140 aa9.53□□□□□ -0.88
CCDC78-201ENST00000293889 HRES1P13985 223 aa9.49□□□□□ -0.89
CCDC78-201ENST00000293889 LINC01558Q9Y6Z2 57 aa9.49□□□□□ -0.89
CCDC78-201ENST00000293889 RNF213Q63HN8 5207 aa9.47□□□□□ -0.89
CCDC78-201ENST00000293889 MUC17Q685J3 4493 aa9.45□□□□□ -0.9
CCDC78-201ENST00000293889 ATP11AUNQ6ZP68 121 aa9.45□□□□□ -0.9
CCDC78-201ENST00000293889 SEC61BP60468 96 aaKnown RBP9.44□□□□□ -0.9
CCDC78-201ENST00000293889 PRR15LQ9BU68 103 aa9.44□□□□□ -0.9
CCDC78-201ENST00000293889 CHKB-CPT1BH3BT56 60 aa9.39□□□□□ -0.91
CCDC78-201ENST00000293889 MUC2Q02817 5179 aa9.38□□□□□ -0.91
CCDC78-201ENST00000293889 IGKV2-30P06310 120 aa9.38□□□□□ -0.91
CCDC78-201ENST00000293889 ACYP2P14621 99 aa9.38□□□□□ -0.91
CCDC78-201ENST00000293889 DMAC1Q96GE9 116 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms