RNA–Protein interactions for RNA: ENST00000293861.7

SNRNP25-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SNRNP25, Length 1,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-201ENST00000293861 APOBP04114 4563 aaKnown RBP12.44□□□□□ -0.42
SNRNP25-201ENST00000293861 ZCCHC13Q8WW36 166 aaKnown RBP12.44□□□□□ -0.42
SNRNP25-201ENST00000293861 FAM236DA0A1B0GTK5 79 aa12.43□□□□□ -0.42
SNRNP25-201ENST00000293861 FAM236CP0DP71 79 aa12.43□□□□□ -0.42
SNRNP25-201ENST00000293861 TYMSOSQ8TAI1 123 aa12.43□□□□□ -0.42
SNRNP25-201ENST00000293861 RPS28P62857 69 aaKnown RBP12.41□□□□□ -0.42
SNRNP25-201ENST00000293861 MP68P56378 58 aa12.39□□□□□ -0.43
SNRNP25-201ENST00000293861 LIMD2Q9BT23 127 aa12.39□□□□□ -0.43
SNRNP25-201ENST00000293861 TP53AIP1Q9HCN2 124 aa12.37□□□□□ -0.43
SNRNP25-201ENST00000293861 H3BPC8 53 aa12.37□□□□□ -0.43
SNRNP25-201ENST00000293861 ATP5EP56381 51 aaPredicted RBP12.36□□□□□ -0.43
SNRNP25-201ENST00000293861 C4orf48Q5BLP8 95 aa12.36□□□□□ -0.43
SNRNP25-201ENST00000293861 C1orf195Q5TG92 126 aa12.36□□□□□ -0.43
SNRNP25-201ENST00000293861 MRPL34Q9BQ48 92 aaKnown RBP12.36□□□□□ -0.43
SNRNP25-201ENST00000293861 NOTCH2NLQ7Z3S9 236 aa12.35□□□□□ -0.43
SNRNP25-201ENST00000293861 C8orf87E5RJ46 101 aa12.34□□□□□ -0.43
SNRNP25-201ENST00000293861 H0Y9P7 68 aa12.33□□□□□ -0.44
SNRNP25-201ENST00000293861 SPINK1P00995 79 aa12.33□□□□□ -0.44
SNRNP25-201ENST00000293861 PRR26Q8N8Z3 221 aa12.33□□□□□ -0.44
SNRNP25-201ENST00000293861 TRAV22A0A0B4J277 110 aa12.31□□□□□ -0.44
SNRNP25-201ENST00000293861 LINC00208Q96KT6 92 aa12.29□□□□□ -0.44
SNRNP25-201ENST00000293861 RPS29P62273 56 aaKnown RBP12.29□□□□□ -0.44
SNRNP25-201ENST00000293861 FAM229AH3BQW9 127 aa12.28□□□□□ -0.44
SNRNP25-201ENST00000293861 SPAG11AQ6PDA7 123 aa12.28□□□□□ -0.44
SNRNP25-201ENST00000293861 LINC00304Q8N9R0 145 aa12.28□□□□□ -0.44
SNRNP25-201ENST00000293861 FAT1Q14517 4588 aa12.26□□□□□ -0.45
SNRNP25-201ENST00000293861 SERP1Q9Y6X1 66 aa12.25□□□□□ -0.45
SNRNP25-201ENST00000293861 NDUFS5O43920 106 aa12.24□□□□□ -0.45
SNRNP25-201ENST00000293861 LINC00313P59037 77 aa12.23□□□□□ -0.45
SNRNP25-201ENST00000293861 C1orf64Q8NEQ6 169 aa12.22□□□□□ -0.45
SNRNP25-201ENST00000293861 OXTP01178 125 aa12.19□□□□□ -0.46
SNRNP25-201ENST00000293861 Q5VSD8 79 aa12.16□□□□□ -0.46
SNRNP25-201ENST00000293861 PKHD1L1Q86WI1 4243 aa12.14□□□□□ -0.47
SNRNP25-201ENST00000293861 Q8N9P0 234 aaPredicted RBP12.14□□□□□ -0.47
SNRNP25-201ENST00000293861 EPPK1P58107 5090 aaKnown RBP12.14□□□□□ -0.47
SNRNP25-201ENST00000293861 KRTAP16-1A8MUX0 517 aa12.12□□□□□ -0.47
SNRNP25-201ENST00000293861 SPANXA2-OT1Q8N9U9 137 aa12.11□□□□□ -0.47
SNRNP25-201ENST00000293861 CYP4F30PQ9H0H9 118 aa12.11□□□□□ -0.47
SNRNP25-201ENST00000293861 KRTAP13-3Q3SY46 172 aa12.11□□□□□ -0.47
SNRNP25-201ENST00000293861 Q5W150 140 aa12.07□□□□□ -0.48
SNRNP25-201ENST00000293861 HSPG2P98160 4391 aa12.07□□□□□ -0.48
SNRNP25-201ENST00000293861 LOC101927531A0A1B0GV80 90 aa12.03□□□□□ -0.48
SNRNP25-201ENST00000293861 RYR1P21817 5038 aa11.99□□□□□ -0.49
SNRNP25-201ENST00000293861 IGLV7-46A0A075B6I9 117 aa11.98□□□□□ -0.49
SNRNP25-201ENST00000293861 SMIM26A0A096LP01 95 aa11.98□□□□□ -0.49
SNRNP25-201ENST00000293861 KRTAP10-8P60410 259 aa11.98□□□□□ -0.49
SNRNP25-201ENST00000293861 PRR4Q16378 134 aa11.98□□□□□ -0.49
SNRNP25-201ENST00000293861 PCOTHQ58A44 107 aa11.97□□□□□ -0.49
SNRNP25-201ENST00000293861 Q8N1X5 172 aa11.96□□□□□ -0.5
SNRNP25-201ENST00000293861 KRTAP17-1Q9BYP8 105 aa11.94□□□□□ -0.5
SNRNP25-201ENST00000293861 KIAA1109Q2LD37 5005 aa11.92□□□□□ -0.5
SNRNP25-201ENST00000293861 FP248Q71RG6 208 aaPredicted RBP11.88□□□□□ -0.51
SNRNP25-201ENST00000293861 IGKV2-30P06310 120 aa11.86□□□□□ -0.51
SNRNP25-201ENST00000293861 FLG2Q5D862 2391 aaPredicted RBP11.86□□□□□ -0.51
SNRNP25-201ENST00000293861 RETNLBQ9BQ08 111 aa11.84□□□□□ -0.51
SNRNP25-201ENST00000293861 TNXBP22105 4242 aa11.81□□□□□ -0.52
SNRNP25-201ENST00000293861 LRP1Q07954 4544 aaKnown RBP11.8□□□□□ -0.52
SNRNP25-201ENST00000293861 C20orf166-AS1Q96NR2 134 aa11.78□□□□□ -0.52
SNRNP25-201ENST00000293861 A8MUU9 505 aa11.77□□□□□ -0.53
SNRNP25-201ENST00000293861 C9orf92A6NGG3 77 aa11.76□□□□□ -0.53
SNRNP25-201ENST00000293861 C4orf26Q17RF5 130 aa11.75□□□□□ -0.53
SNRNP25-201ENST00000293861 FAT3Q8TDW7 4589 aa11.74□□□□□ -0.53
SNRNP25-201ENST00000293861 HRES1P13985 223 aa11.74□□□□□ -0.53
SNRNP25-201ENST00000293861 MT1HL1P0DM35 61 aa11.73□□□□□ -0.53
SNRNP25-201ENST00000293861 COA5Q86WW8 74 aa11.73□□□□□ -0.53
SNRNP25-201ENST00000293861 BIRC6Q9NR09 4857 aa11.72□□□□□ -0.53
SNRNP25-201ENST00000293861 IGKV2D-30A0A075B6S6 120 aa11.68□□□□□ -0.54
SNRNP25-201ENST00000293861 Q1T7F1 81 aa11.68□□□□□ -0.54
SNRNP25-201ENST00000293861 MPLKIPQ8TAP9 179 aa11.68□□□□□ -0.54
SNRNP25-201ENST00000293861 DMAC1Q96GE9 116 aa11.65□□□□□ -0.54
SNRNP25-201ENST00000293861 C7orf65Q6ZTY9 151 aa11.64□□□□□ -0.55
SNRNP25-201ENST00000293861 ACYP2P14621 99 aa11.62□□□□□ -0.55
SNRNP25-201ENST00000293861 Q75L30 129 aa11.62□□□□□ -0.55
SNRNP25-201ENST00000293861 DMBT1Q9UGM3 2413 aaPredicted RBP11.61□□□□□ -0.55
SNRNP25-201ENST00000293861 V9GYY9 64 aa11.59□□□□□ -0.55
SNRNP25-201ENST00000293861 KRTAP4-5Q9BYR2 181 aa11.56□□□□□ -0.56
SNRNP25-201ENST00000293861 MYCBP2O75592 4640 aa11.56□□□□□ -0.56
SNRNP25-201ENST00000293861 HERC2O95714 4834 aa11.53□□□□□ -0.56
SNRNP25-201ENST00000293861 ABCA13Q86UQ4 5058 aa11.44□□□□□ -0.58
SNRNP25-201ENST00000293861 RPL37P61927 97 aaKnown RBP11.43□□□□□ -0.58
SNRNP25-201ENST00000293861 XP32Q5T750 250 aa11.43□□□□□ -0.58
SNRNP25-201ENST00000293861 A8MUN3 132 aa11.42□□□□□ -0.58
SNRNP25-201ENST00000293861 SPINK7P58062 85 aa11.42□□□□□ -0.58
SNRNP25-201ENST00000293861 CHKB-CPT1BH3BT56 60 aa11.41□□□□□ -0.58
SNRNP25-201ENST00000293861 PSPHP1O15172 72 aa11.4□□□□□ -0.58
SNRNP25-201ENST00000293861 ATP11AUNQ6ZP68 121 aa11.4□□□□□ -0.58
SNRNP25-201ENST00000293861 LINC01558Q9Y6Z2 57 aa11.4□□□□□ -0.58
SNRNP25-201ENST00000293861 TPRXLQ17RH7 258 aa11.34□□□□□ -0.59
SNRNP25-201ENST00000293861 Q5VV11 94 aa11.33□□□□□ -0.6
SNRNP25-201ENST00000293861 PRR15LQ9BU68 103 aa11.33□□□□□ -0.6
SNRNP25-201ENST00000293861 J3QL48 77 aa11.25□□□□□ -0.61
SNRNP25-201ENST00000293861 KRTAP3-1Q9BYR8 98 aa11.25□□□□□ -0.61
SNRNP25-201ENST00000293861 COX6B2Q6YFQ2 88 aa11.21□□□□□ -0.61
SNRNP25-201ENST00000293861 BRK1Q8WUW1 75 aa11.2□□□□□ -0.62
SNRNP25-201ENST00000293861 PRO0628Q9UI54 55 aa11.17□□□□□ -0.62
SNRNP25-201ENST00000293861 PCLOQ9Y6V0 5065 aa11.15□□□□□ -0.62
SNRNP25-201ENST00000293861 SPTSSBQ8NFR3 76 aa11.12□□□□□ -0.63
SNRNP25-201ENST00000293861 SVIPQ8NHG7 77 aa11.1□□□□□ -0.63
SNRNP25-201ENST00000293861 A0A1B0GU69 56 aa11.08□□□□□ -0.64
SNRNP25-201ENST00000293861 A6NED7 52 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms