RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 DNAH8Q96JB1 4490 aa11.39□□□□□ -0.59
LSM12-201ENST00000293406 HECTD4Q9Y4D8 3996 aa11.38□□□□□ -0.59
LSM12-201ENST00000293406 FRAS1Q86XX4 4008 aa11.37□□□□□ -0.59
LSM12-201ENST00000293406 A6NED7 52 aa11.35□□□□□ -0.59
LSM12-201ENST00000293406 SPAG11AQ6PDA7 123 aa11.35□□□□□ -0.59
LSM12-201ENST00000293406 STARD9Q9P2P6 4700 aa11.34□□□□□ -0.59
LSM12-201ENST00000293406 SPINK6Q6UWN8 80 aa11.34□□□□□ -0.59
LSM12-201ENST00000293406 HRES1P13985 223 aa11.34□□□□□ -0.59
LSM12-201ENST00000293406 LINC01558Q9Y6Z2 57 aa11.32□□□□□ -0.6
LSM12-201ENST00000293406 LCA10Q71F78 164 aa11.31□□□□□ -0.6
LSM12-201ENST00000293406 DNAH17Q9UFH2 4485 aa11.28□□□□□ -0.6
LSM12-201ENST00000293406 CIRBP-AS1Q8TBR5 109 aa11.28□□□□□ -0.6
LSM12-201ENST00000293406 Q5W150 140 aa11.27□□□□□ -0.6
LSM12-201ENST00000293406 SPTSSBQ8NFR3 76 aa11.27□□□□□ -0.6
LSM12-201ENST00000293406 IGLV7-43P04211 117 aa11.27□□□□□ -0.61
LSM12-201ENST00000293406 DNAH2Q9P225 4427 aa11.27□□□□□ -0.61
LSM12-201ENST00000293406 PRKDCP78527 4128 aaKnown RBP11.26□□□□□ -0.61
LSM12-201ENST00000293406 SEC61GP60059 68 aa11.25□□□□□ -0.61
LSM12-201ENST00000293406 ATP11AUNQ6ZP68 121 aa11.25□□□□□ -0.61
LSM12-201ENST00000293406 KRTAP13-3Q3SY46 172 aa11.24□□□□□ -0.61
LSM12-201ENST00000293406 CDC42SE1Q9NRR8 79 aa11.23□□□□□ -0.61
LSM12-201ENST00000293406 KMT2AQ03164 3969 aa11.22□□□□□ -0.61
LSM12-201ENST00000293406 C8orf87E5RJ46 101 aa11.19□□□□□ -0.62
LSM12-201ENST00000293406 C1orf134Q5TEV5 83 aa11.18□□□□□ -0.62
LSM12-201ENST00000293406 SSBP3-AS1Q7Z2R9 100 aa11.18□□□□□ -0.62
LSM12-201ENST00000293406 FBN3Q75N90 2809 aa11.18□□□□□ -0.62
LSM12-201ENST00000293406 PRR26Q8N8Z3 221 aa11.15□□□□□ -0.62
LSM12-201ENST00000293406 SPINK7P58062 85 aa11.14□□□□□ -0.63
LSM12-201ENST00000293406 ACYP2P14621 99 aa11.13□□□□□ -0.63
LSM12-201ENST00000293406 KTN1-AS1Q86SY8 53 aa11.13□□□□□ -0.63
LSM12-201ENST00000293406 MEGF8Q7Z7M0 2845 aa11.12□□□□□ -0.63
LSM12-201ENST00000293406 ALMS1Q8TCU4 4167 aa11.11□□□□□ -0.63
LSM12-201ENST00000293406 LINC00313P59037 77 aa11.1□□□□□ -0.63
LSM12-201ENST00000293406 A6NN06 94 aa11.09□□□□□ -0.63
LSM12-201ENST00000293406 TGP01266 2768 aa11.09□□□□□ -0.63
LSM12-201ENST00000293406 FAM229AH3BQW9 127 aa11.07□□□□□ -0.64
LSM12-201ENST00000293406 DMAC1Q96GE9 116 aa11.06□□□□□ -0.64
LSM12-201ENST00000293406 RETNLBQ9BQ08 111 aa11.04□□□□□ -0.64
LSM12-201ENST00000293406 DNAH11Q96DT5 4516 aa11.04□□□□□ -0.64
LSM12-201ENST00000293406 LY6G6CO95867 125 aa11.03□□□□□ -0.64
LSM12-201ENST00000293406 DNAH6Q9C0G6 4158 aa11.02□□□□□ -0.65
LSM12-201ENST00000293406 KRTAP13-2Q52LG2 175 aa11.01□□□□□ -0.65
LSM12-201ENST00000293406 KRTAP10-2P60368 255 aa11□□□□□ -0.65
LSM12-201ENST00000293406 IGKV2-30P06310 120 aa11□□□□□ -0.65
LSM12-201ENST00000293406 DNAH5Q8TE73 4624 aa10.97□□□□□ -0.65
LSM12-201ENST00000293406 KRTAP16-1A8MUX0 517 aa10.93□□□□□ -0.66
LSM12-201ENST00000293406 C7orf65Q6ZTY9 151 aa10.92□□□□□ -0.66
LSM12-201ENST00000293406 A0A1B0GU69 56 aa10.9□□□□□ -0.66
LSM12-201ENST00000293406 RBM12B-AS1Q9P1G2 102 aa10.89□□□□□ -0.67
LSM12-201ENST00000293406 Q6ZSA8 131 aa10.87□□□□□ -0.67
LSM12-201ENST00000293406 KRTAP10-1P60331 282 aa10.86□□□□□ -0.67
LSM12-201ENST00000293406 LRP1BQ9NZR2 4599 aa10.86□□□□□ -0.67
LSM12-201ENST00000293406 IGKV2D-30A0A075B6S6 120 aa10.86□□□□□ -0.67
LSM12-201ENST00000293406 KRTAP1-4P0C5Y4 121 aa10.85□□□□□ -0.67
LSM12-201ENST00000293406 C4orf48Q5BLP8 95 aa10.79□□□□□ -0.68
LSM12-201ENST00000293406 PKD1P98161 4303 aa10.77□□□□□ -0.68
LSM12-201ENST00000293406 PLA2G1BP04054 148 aaKnown RBP10.75□□□□□ -0.69
LSM12-201ENST00000293406 SPATA8Q6RVD6 105 aa10.75□□□□□ -0.69
LSM12-201ENST00000293406 TYMSOSQ8TAI1 123 aa10.74□□□□□ -0.69
LSM12-201ENST00000293406 UQCR11O14957 56 aa10.72□□□□□ -0.69
LSM12-201ENST00000293406 SPINK1P00995 79 aa10.72□□□□□ -0.69
LSM12-201ENST00000293406 VPS13BQ7Z7G8 4022 aa10.72□□□□□ -0.69
LSM12-201ENST00000293406 MIR22HGQ0VDD5 57 aa10.71□□□□□ -0.69
LSM12-201ENST00000293406 FAT2Q9NYQ8 4349 aa10.7□□□□□ -0.7
LSM12-201ENST00000293406 DNHD1Q96M86 4753 aa10.67□□□□□ -0.7
LSM12-201ENST00000293406 HYDINQ4G0P3 5121 aa10.62□□□□□ -0.71
LSM12-201ENST00000293406 PRAC1Q96KF2 57 aa10.61□□□□□ -0.71
LSM12-201ENST00000293406 Q8N1X5 172 aa10.6□□□□□ -0.71
LSM12-201ENST00000293406 LINC00304Q8N9R0 145 aa10.58□□□□□ -0.72
LSM12-201ENST00000293406 ADM2Q7Z4H4 148 aa10.57□□□□□ -0.72
LSM12-201ENST00000293406 RPS29P62273 56 aaKnown RBP10.55□□□□□ -0.72
LSM12-201ENST00000293406 C9orf92A6NGG3 77 aa10.43□□□□□ -0.74
LSM12-201ENST00000293406 PKHD1P08F94 4074 aa10.42□□□□□ -0.74
LSM12-201ENST00000293406 SACSQ9NZJ4 4579 aa10.42□□□□□ -0.74
LSM12-201ENST00000293406 A8MUU9 505 aa10.4□□□□□ -0.74
LSM12-201ENST00000293406 C20orf166-AS1Q96NR2 134 aa10.4□□□□□ -0.74
LSM12-201ENST00000293406 SMR3BP02814 79 aaPredicted RBP10.38□□□□□ -0.75
LSM12-201ENST00000293406 LINC01554Q52M75 96 aa10.33□□□□□ -0.76
LSM12-201ENST00000293406 KRTAP3-1Q9BYR8 98 aa10.33□□□□□ -0.76
LSM12-201ENST00000293406 H0YAA0 97 aa10.31□□□□□ -0.76
LSM12-201ENST00000293406 CSAG1Q6PB30 78 aa10.29□□□□□ -0.76
LSM12-201ENST00000293406 PKHD1L1Q86WI1 4243 aa10.28□□□□□ -0.76
LSM12-201ENST00000293406 DYNC1H1Q14204 4646 aaKnown RBP10.27□□□□□ -0.77
LSM12-201ENST00000293406 A0A1B0GU33 70 aa10.25□□□□□ -0.77
LSM12-201ENST00000293406 FAT1Q14517 4588 aa10.22□□□□□ -0.77
LSM12-201ENST00000293406 APOBP04114 4563 aaKnown RBP10.21□□□□□ -0.77
LSM12-201ENST00000293406 KRTAP10-4P60372 401 aaPredicted RBP10.21□□□□□ -0.78
LSM12-201ENST00000293406 H1FX-AS1Q4G0G2 97 aa10.21□□□□□ -0.78
LSM12-201ENST00000293406 COX6B2Q6YFQ2 88 aa10.15□□□□□ -0.79
LSM12-201ENST00000293406 A0A1B0GVY2 172 aa10.13□□□□□ -0.79
LSM12-201ENST00000293406 FLG2Q5D862 2391 aaPredicted RBP10□□□□□ -0.81
LSM12-201ENST00000293406 K7ERS5 55 aa9.99□□□□□ -0.81
LSM12-201ENST00000293406 KRTAP25-1Q3LHN0 102 aa9.99□□□□□ -0.81
LSM12-201ENST00000293406 FAT3Q8TDW7 4589 aa9.94□□□□□ -0.82
LSM12-201ENST00000293406 KRTAP21-3Q3LHN1 58 aa9.9□□□□□ -0.82
LSM12-201ENST00000293406 KRTAP3-3Q9BYR6 98 aa9.88□□□□□ -0.83
LSM12-201ENST00000293406 KRTAP10-6P60371 365 aaPredicted RBP9.86□□□□□ -0.83
LSM12-201ENST00000293406 RPL37P61927 97 aaKnown RBP9.86□□□□□ -0.83
LSM12-201ENST00000293406 TNXBP22105 4242 aa9.85□□□□□ -0.83
LSM12-201ENST00000293406 KRTAP10-8P60410 259 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms