RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 A0A1B0GVX0 72 aa8.94□□□□□ -0.98
CCDC116-201ENST00000292779 RYR3Q15413 4870 aa8.94□□□□□ -0.98
CCDC116-201ENST00000292779 CDK2AP2O75956 126 aa8.92□□□□□ -0.98
CCDC116-201ENST00000292779 SPANXA2-OT1Q8N9U9 137 aa8.92□□□□□ -0.98
CCDC116-201ENST00000292779 CIRBP-AS1Q8TBR5 109 aa8.91□□□□□ -0.98
CCDC116-201ENST00000292779 TP53AIP1Q9HCN2 124 aa8.91□□□□□ -0.98
CCDC116-201ENST00000292779 A0A087X002 238 aa8.88□□□□□ -0.99
CCDC116-201ENST00000292779 NOTCH2NLQ7Z3S9 236 aa8.88□□□□□ -0.99
CCDC116-201ENST00000292779 NDUFS5O43920 106 aa8.88□□□□□ -0.99
CCDC116-201ENST00000292779 Q1T7F1 81 aa8.87□□□□□ -0.99
CCDC116-201ENST00000292779 MRPL34Q9BQ48 92 aaKnown RBP8.86□□□□□ -0.99
CCDC116-201ENST00000292779 PRO0628Q9UI54 55 aa8.86□□□□□ -0.99
CCDC116-201ENST00000292779 SPINK6Q6UWN8 80 aa8.85□□□□□ -0.99
CCDC116-201ENST00000292779 LRP1BQ9NZR2 4599 aa8.85□□□□□ -0.99
CCDC116-201ENST00000292779 PCOTHQ58A44 107 aa8.83□□□□□ -1
CCDC116-201ENST00000292779 BRK1Q8WUW1 75 aa8.83□□□□□ -1
CCDC116-201ENST00000292779 DYNC1H1Q14204 4646 aaKnown RBP8.82□□□□□ -1
CCDC116-201ENST00000292779 IGLV7-46A0A075B6I9 117 aa8.81□□□□□ -1
CCDC116-201ENST00000292779 KRTAP10-1P60331 282 aa8.81□□□□□ -1
CCDC116-201ENST00000292779 CD164Q04900 197 aa8.81□□□□□ -1
CCDC116-201ENST00000292779 SSBP3-AS1Q7Z2R9 100 aa8.81□□□□□ -1
CCDC116-201ENST00000292779 Q6ZSA8 131 aa8.8□□□□□ -1
CCDC116-201ENST00000292779 PSPHP1O15172 72 aa8.78□□□□□ -1
CCDC116-201ENST00000292779 VPS13BQ7Z7G8 4022 aa8.76□□□□□ -1.01
CCDC116-201ENST00000292779 A0A1B0GVY2 172 aa8.75□□□□□ -1.01
CCDC116-201ENST00000292779 COA5Q86WW8 74 aa8.75□□□□□ -1.01
CCDC116-201ENST00000292779 KRTAP13-2Q52LG2 175 aa8.74□□□□□ -1.01
CCDC116-201ENST00000292779 V9GYY9 64 aa8.74□□□□□ -1.01
CCDC116-201ENST00000292779 Q5W150 140 aa8.73□□□□□ -1.01
CCDC116-201ENST00000292779 A8MUN3 132 aa8.72□□□□□ -1.01
CCDC116-201ENST00000292779 Q8N9P0 234 aaPredicted RBP8.71□□□□□ -1.01
CCDC116-201ENST00000292779 APOBP04114 4563 aaKnown RBP8.71□□□□□ -1.02
CCDC116-201ENST00000292779 KRTAP13-3Q3SY46 172 aa8.7□□□□□ -1.02
CCDC116-201ENST00000292779 C8orf87E5RJ46 101 aa8.7□□□□□ -1.02
CCDC116-201ENST00000292779 LOC101927531A0A1B0GV80 90 aa8.68□□□□□ -1.02
CCDC116-201ENST00000292779 C1orf195Q5TG92 126 aa8.68□□□□□ -1.02
CCDC116-201ENST00000292779 LINC00313P59037 77 aa8.66□□□□□ -1.02
CCDC116-201ENST00000292779 KRTAP1-4P0C5Y4 121 aa8.66□□□□□ -1.02
CCDC116-201ENST00000292779 Q5VV11 94 aa8.66□□□□□ -1.02
CCDC116-201ENST00000292779 LIMD2Q9BT23 127 aa8.66□□□□□ -1.02
CCDC116-201ENST00000292779 EPPK1P58107 5090 aaKnown RBP8.63□□□□□ -1.03
CCDC116-201ENST00000292779 FAT1Q14517 4588 aa8.63□□□□□ -1.03
CCDC116-201ENST00000292779 HRES1P13985 223 aa8.63□□□□□ -1.03
CCDC116-201ENST00000292779 PRR15LQ9BU68 103 aa8.63□□□□□ -1.03
CCDC116-201ENST00000292779 RETNLBQ9BQ08 111 aa8.59□□□□□ -1.03
CCDC116-201ENST00000292779 CHKB-CPT1BH3BT56 60 aa8.57□□□□□ -1.04
CCDC116-201ENST00000292779 PLA2G1BP04054 148 aaKnown RBP8.57□□□□□ -1.04
CCDC116-201ENST00000292779 FAM229AH3BQW9 127 aa8.57□□□□□ -1.04
CCDC116-201ENST00000292779 SPAG11AQ6PDA7 123 aa8.57□□□□□ -1.04
CCDC116-201ENST00000292779 KRTAP16-1A8MUX0 517 aa8.56□□□□□ -1.04
CCDC116-201ENST00000292779 HSPG2P98160 4391 aa8.55□□□□□ -1.04
CCDC116-201ENST00000292779 SMR3BP02814 79 aaPredicted RBP8.55□□□□□ -1.04
CCDC116-201ENST00000292779 TYMSOSQ8TAI1 123 aa8.54□□□□□ -1.04
CCDC116-201ENST00000292779 A8MU10 97 aa8.53□□□□□ -1.04
CCDC116-201ENST00000292779 C4orf48Q5BLP8 95 aa8.53□□□□□ -1.04
CCDC116-201ENST00000292779 Q75L30 129 aa8.53□□□□□ -1.04
CCDC116-201ENST00000292779 LINC01558Q9Y6Z2 57 aa8.52□□□□□ -1.04
CCDC116-201ENST00000292779 KIAA1109Q2LD37 5005 aa8.51□□□□□ -1.05
CCDC116-201ENST00000292779 IGKV2-30P06310 120 aa8.5□□□□□ -1.05
CCDC116-201ENST00000292779 KRTAP17-1Q9BYP8 105 aa8.5□□□□□ -1.05
CCDC116-201ENST00000292779 ACYP2P14621 99 aa8.49□□□□□ -1.05
CCDC116-201ENST00000292779 PRR26Q8N8Z3 221 aa8.49□□□□□ -1.05
CCDC116-201ENST00000292779 SPINK1P00995 79 aa8.49□□□□□ -1.05
CCDC116-201ENST00000292779 RYR1P21817 5038 aa8.48□□□□□ -1.05
CCDC116-201ENST00000292779 DMAC1Q96GE9 116 aa8.47□□□□□ -1.05
CCDC116-201ENST00000292779 A6NED7 52 aa8.46□□□□□ -1.06
CCDC116-201ENST00000292779 KRTAP10-4P60372 401 aaPredicted RBP8.43□□□□□ -1.06
CCDC116-201ENST00000292779 LCA10Q71F78 164 aa8.43□□□□□ -1.06
CCDC116-201ENST00000292779 LINC00304Q8N9R0 145 aa8.42□□□□□ -1.06
CCDC116-201ENST00000292779 IGKV2D-30A0A075B6S6 120 aa8.41□□□□□ -1.06
CCDC116-201ENST00000292779 PKHD1L1Q86WI1 4243 aa8.38□□□□□ -1.07
CCDC116-201ENST00000292779 RPS29P62273 56 aaKnown RBP8.37□□□□□ -1.07
CCDC116-201ENST00000292779 SPINK7P58062 85 aa8.36□□□□□ -1.07
CCDC116-201ENST00000292779 CDC42SE1Q9NRR8 79 aa8.36□□□□□ -1.07
CCDC116-201ENST00000292779 SPTSSBQ8NFR3 76 aa8.34□□□□□ -1.07
CCDC116-201ENST00000292779 PMAIP1Q13794 54 aa8.33□□□□□ -1.08
CCDC116-201ENST00000292779 LRP1Q07954 4544 aaKnown RBP8.33□□□□□ -1.08
CCDC116-201ENST00000292779 ATP11AUNQ6ZP68 121 aa8.31□□□□□ -1.08
CCDC116-201ENST00000292779 C7orf65Q6ZTY9 151 aa8.3□□□□□ -1.08
CCDC116-201ENST00000292779 FLG2Q5D862 2391 aaPredicted RBP8.27□□□□□ -1.08
CCDC116-201ENST00000292779 Q5VSD8 79 aa8.26□□□□□ -1.09
CCDC116-201ENST00000292779 C9orf92A6NGG3 77 aa8.25□□□□□ -1.09
CCDC116-201ENST00000292779 MYCBP2O75592 4640 aa8.25□□□□□ -1.09
CCDC116-201ENST00000292779 A0A1B0GU69 56 aa8.24□□□□□ -1.09
CCDC116-201ENST00000292779 Q8N1X5 172 aa8.21□□□□□ -1.1
CCDC116-201ENST00000292779 KRTAP4-5Q9BYR2 181 aa8.21□□□□□ -1.1
CCDC116-201ENST00000292779 FAT3Q8TDW7 4589 aa8.2□□□□□ -1.1
CCDC116-201ENST00000292779 TNXBP22105 4242 aa8.2□□□□□ -1.1
CCDC116-201ENST00000292779 A6NN06 94 aa8.2□□□□□ -1.1
CCDC116-201ENST00000292779 C20orf166-AS1Q96NR2 134 aa8.19□□□□□ -1.1
CCDC116-201ENST00000292779 BIRC6Q9NR09 4857 aa8.19□□□□□ -1.1
CCDC116-201ENST00000292779 A8MUU9 505 aa8.19□□□□□ -1.1
CCDC116-201ENST00000292779 ABCA13Q86UQ4 5058 aa8.14□□□□□ -1.11
CCDC116-201ENST00000292779 KTN1-AS1Q86SY8 53 aa8.13□□□□□ -1.11
CCDC116-201ENST00000292779 HERC2O95714 4834 aa8.11□□□□□ -1.11
CCDC116-201ENST00000292779 SPATA8Q6RVD6 105 aa8.08□□□□□ -1.12
CCDC116-201ENST00000292779 UQCR11O14957 56 aa8.08□□□□□ -1.12
CCDC116-201ENST00000292779 MIR22HGQ0VDD5 57 aa8.05□□□□□ -1.12
CCDC116-201ENST00000292779 KRTAP3-1Q9BYR8 98 aa8.05□□□□□ -1.12
CCDC116-201ENST00000292779 DMBT1Q9UGM3 2413 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms