RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 BRK1Q8WUW1 75 aa11.76□□□□□ -0.53
SCUBE1-201ENST00000290460 PRO0628Q9UI54 55 aa11.76□□□□□ -0.53
SCUBE1-201ENST00000290460 TP53AIP1Q9HCN2 124 aa11.75□□□□□ -0.53
SCUBE1-201ENST00000290460 Q1T7F1 81 aa11.75□□□□□ -0.53
SCUBE1-201ENST00000290460 PCOTHQ58A44 107 aa11.75□□□□□ -0.53
SCUBE1-201ENST00000290460 HYDINQ4G0P3 5121 aa11.73□□□□□ -0.53
SCUBE1-201ENST00000290460 MRPL34Q9BQ48 92 aaKnown RBP11.72□□□□□ -0.53
SCUBE1-201ENST00000290460 PKD1P98161 4303 aa11.71□□□□□ -0.54
SCUBE1-201ENST00000290460 PSPHP1O15172 72 aa11.7□□□□□ -0.54
SCUBE1-201ENST00000290460 CD164Q04900 197 aa11.69□□□□□ -0.54
SCUBE1-201ENST00000290460 LRP1BQ9NZR2 4599 aa11.68□□□□□ -0.54
SCUBE1-201ENST00000290460 KRTAP21-3Q3LHN1 58 aa11.66□□□□□ -0.54
SCUBE1-201ENST00000290460 FAT2Q9NYQ8 4349 aa11.66□□□□□ -0.54
SCUBE1-201ENST00000290460 IGLV7-46A0A075B6I9 117 aa11.66□□□□□ -0.54
SCUBE1-201ENST00000290460 KRTAP10-1P60331 282 aa11.63□□□□□ -0.55
SCUBE1-201ENST00000290460 SSBP3-AS1Q7Z2R9 100 aa11.61□□□□□ -0.55
SCUBE1-201ENST00000290460 COA5Q86WW8 74 aa11.6□□□□□ -0.55
SCUBE1-201ENST00000290460 A8MUN3 132 aa11.6□□□□□ -0.55
SCUBE1-201ENST00000290460 Q5W150 140 aa11.59□□□□□ -0.55
SCUBE1-201ENST00000290460 VPS13BQ7Z7G8 4022 aa11.59□□□□□ -0.55
SCUBE1-201ENST00000290460 KRTAP13-2Q52LG2 175 aa11.58□□□□□ -0.55
SCUBE1-201ENST00000290460 Q6ZSA8 131 aa11.58□□□□□ -0.56
SCUBE1-201ENST00000290460 Q8N9P0 234 aaPredicted RBP11.56□□□□□ -0.56
SCUBE1-201ENST00000290460 V9GYY9 64 aa11.53□□□□□ -0.56
SCUBE1-201ENST00000290460 KRTAP13-3Q3SY46 172 aa11.52□□□□□ -0.57
SCUBE1-201ENST00000290460 Q5VV11 94 aa11.49□□□□□ -0.57
SCUBE1-201ENST00000290460 C1orf195Q5TG92 126 aa11.48□□□□□ -0.57
SCUBE1-201ENST00000290460 LOC101927531A0A1B0GV80 90 aa11.47□□□□□ -0.57
SCUBE1-201ENST00000290460 C8orf87E5RJ46 101 aa11.47□□□□□ -0.57
SCUBE1-201ENST00000290460 PKHD1P08F94 4074 aa11.47□□□□□ -0.57
SCUBE1-201ENST00000290460 KRTAP1-4P0C5Y4 121 aa11.46□□□□□ -0.57
SCUBE1-201ENST00000290460 LINC00313P59037 77 aa11.46□□□□□ -0.57
SCUBE1-201ENST00000290460 PRR15LQ9BU68 103 aa11.46□□□□□ -0.57
SCUBE1-201ENST00000290460 HRES1P13985 223 aa11.45□□□□□ -0.58
SCUBE1-201ENST00000290460 LIMD2Q9BT23 127 aa11.45□□□□□ -0.58
SCUBE1-201ENST00000290460 RETNLBQ9BQ08 111 aa11.43□□□□□ -0.58
SCUBE1-201ENST00000290460 A8MU10 97 aa11.4□□□□□ -0.58
SCUBE1-201ENST00000290460 SPAG11AQ6PDA7 123 aa11.39□□□□□ -0.59
SCUBE1-201ENST00000290460 CHKB-CPT1BH3BT56 60 aa11.39□□□□□ -0.59
SCUBE1-201ENST00000290460 PLA2G1BP04054 148 aaKnown RBP11.35□□□□□ -0.59
SCUBE1-201ENST00000290460 KRTAP16-1A8MUX0 517 aa11.33□□□□□ -0.6
SCUBE1-201ENST00000290460 FAM229AH3BQW9 127 aa11.32□□□□□ -0.6
SCUBE1-201ENST00000290460 SACSQ9NZJ4 4579 aa11.31□□□□□ -0.6
SCUBE1-201ENST00000290460 TYMSOSQ8TAI1 123 aa11.3□□□□□ -0.6
SCUBE1-201ENST00000290460 Q75L30 129 aa11.29□□□□□ -0.6
SCUBE1-201ENST00000290460 PRR26Q8N8Z3 221 aa11.29□□□□□ -0.6
SCUBE1-201ENST00000290460 LINC01558Q9Y6Z2 57 aa11.28□□□□□ -0.6
SCUBE1-201ENST00000290460 C4orf48Q5BLP8 95 aa11.27□□□□□ -0.61
SCUBE1-201ENST00000290460 IGKV2-30P06310 120 aa11.25□□□□□ -0.61
SCUBE1-201ENST00000290460 A6NED7 52 aa11.24□□□□□ -0.61
SCUBE1-201ENST00000290460 ACYP2P14621 99 aa11.23□□□□□ -0.61
SCUBE1-201ENST00000290460 DMAC1Q96GE9 116 aa11.21□□□□□ -0.62
SCUBE1-201ENST00000290460 SPINK1P00995 79 aa11.2□□□□□ -0.62
SCUBE1-201ENST00000290460 LCA10Q71F78 164 aa11.2□□□□□ -0.62
SCUBE1-201ENST00000290460 DYNC1H1Q14204 4646 aaKnown RBP11.19□□□□□ -0.62
SCUBE1-201ENST00000290460 SMR3BP02814 79 aaPredicted RBP11.19□□□□□ -0.62
SCUBE1-201ENST00000290460 IGKV2D-30A0A075B6S6 120 aa11.18□□□□□ -0.62
SCUBE1-201ENST00000290460 LINC00304Q8N9R0 145 aa11.14□□□□□ -0.63
SCUBE1-201ENST00000290460 FAT1Q14517 4588 aa11.13□□□□□ -0.63
SCUBE1-201ENST00000290460 SPINK7P58062 85 aa11.12□□□□□ -0.63
SCUBE1-201ENST00000290460 SPTSSBQ8NFR3 76 aa11.11□□□□□ -0.63
SCUBE1-201ENST00000290460 PMAIP1Q13794 54 aa11.08□□□□□ -0.64
SCUBE1-201ENST00000290460 CDC42SE1Q9NRR8 79 aa11.07□□□□□ -0.64
SCUBE1-201ENST00000290460 APOBP04114 4563 aaKnown RBP11.06□□□□□ -0.64
SCUBE1-201ENST00000290460 A0A1B0GVY2 172 aa11.01□□□□□ -0.65
SCUBE1-201ENST00000290460 RPS29P62273 56 aaKnown RBP11.01□□□□□ -0.65
SCUBE1-201ENST00000290460 ATP11AUNQ6ZP68 121 aa11.01□□□□□ -0.65
SCUBE1-201ENST00000290460 PKHD1L1Q86WI1 4243 aa11.01□□□□□ -0.65
SCUBE1-201ENST00000290460 C7orf65Q6ZTY9 151 aa11□□□□□ -0.65
SCUBE1-201ENST00000290460 KRTAP10-4P60372 401 aaPredicted RBP10.97□□□□□ -0.65
SCUBE1-201ENST00000290460 C9orf92A6NGG3 77 aa10.96□□□□□ -0.65
SCUBE1-201ENST00000290460 RYR2Q92736 4967 aa10.94□□□□□ -0.66
SCUBE1-201ENST00000290460 A0A1B0GU69 56 aa10.92□□□□□ -0.66
SCUBE1-201ENST00000290460 Q8N1X5 172 aa10.92□□□□□ -0.66
SCUBE1-201ENST00000290460 KMT2CQ8NEZ4 4911 aaKnown RBP10.92□□□□□ -0.66
SCUBE1-201ENST00000290460 A6NN06 94 aa10.88□□□□□ -0.67
SCUBE1-201ENST00000290460 A8MUU9 505 aa10.82□□□□□ -0.68
SCUBE1-201ENST00000290460 C20orf166-AS1Q96NR2 134 aa10.82□□□□□ -0.68
SCUBE1-201ENST00000290460 FLG2Q5D862 2391 aaPredicted RBP10.8□□□□□ -0.68
SCUBE1-201ENST00000290460 KTN1-AS1Q86SY8 53 aa10.78□□□□□ -0.68
SCUBE1-201ENST00000290460 LRP1Q07954 4544 aaKnown RBP10.75□□□□□ -0.69
SCUBE1-201ENST00000290460 UQCR11O14957 56 aa10.69□□□□□ -0.7
SCUBE1-201ENST00000290460 SPATA8Q6RVD6 105 aa10.69□□□□□ -0.7
SCUBE1-201ENST00000290460 TNXBP22105 4242 aa10.68□□□□□ -0.7
SCUBE1-201ENST00000290460 MIR22HGQ0VDD5 57 aa10.68□□□□□ -0.7
SCUBE1-201ENST00000290460 KRTAP3-1Q9BYR8 98 aa10.68□□□□□ -0.7
SCUBE1-201ENST00000290460 RYR3Q15413 4870 aa10.65□□□□□ -0.7
SCUBE1-201ENST00000290460 FAT3Q8TDW7 4589 aa10.64□□□□□ -0.71
SCUBE1-201ENST00000290460 SEC61GP60059 68 aa10.63□□□□□ -0.71
SCUBE1-201ENST00000290460 HSPG2P98160 4391 aa10.62□□□□□ -0.71
SCUBE1-201ENST00000290460 DMBT1Q9UGM3 2413 aaPredicted RBP10.57□□□□□ -0.72
SCUBE1-201ENST00000290460 Q5VSD8 79 aa10.54□□□□□ -0.72
SCUBE1-201ENST00000290460 KRTAP10-8P60410 259 aa10.52□□□□□ -0.73
SCUBE1-201ENST00000290460 RBM12B-AS1Q9P1G2 102 aa10.51□□□□□ -0.73
SCUBE1-201ENST00000290460 MYCBP2O75592 4640 aa10.5□□□□□ -0.73
SCUBE1-201ENST00000290460 COX6B2Q6YFQ2 88 aa10.46□□□□□ -0.74
SCUBE1-201ENST00000290460 ADM2Q7Z4H4 148 aa10.45□□□□□ -0.74
SCUBE1-201ENST00000290460 KRTAP17-1Q9BYP8 105 aa10.45□□□□□ -0.74
SCUBE1-201ENST00000290460 RYR1P21817 5038 aa10.44□□□□□ -0.74
SCUBE1-201ENST00000290460 PRAC1Q96KF2 57 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms