RNA–Protein interactions for RNA: ENST00000278616.8

ATM-201, Transcript of ATM serine/threonine kinase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ATM, Length 13,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-201ENST00000278616 COL12A1Q99715 3063 aa4.25□□□□□ -1.73
ATM-201ENST00000278616 KRTAP11-1Q8IUC1 163 aa4.24□□□□□ -1.73
ATM-201ENST00000278616 PP632Q6XCG6 107 aa4.23□□□□□ -1.73
ATM-201ENST00000278616 SPEGQ15772 3267 aa4.22□□□□□ -1.73
ATM-201ENST00000278616 MYO15AQ9UKN7 3530 aa4.2□□□□□ -1.74
ATM-201ENST00000278616 HTTP42858 3142 aa4.18□□□□□ -1.74
ATM-201ENST00000278616 LAMA1P25391 3075 aa4.18□□□□□ -1.74
ATM-201ENST00000278616 BOD1L1Q8NFC6 3051 aa4.17□□□□□ -1.74
ATM-201ENST00000278616 ASPMQ8IZT6 3477 aa4.17□□□□□ -1.74
ATM-201ENST00000278616 CRYBG3Q68DQ2 2970 aa4.16□□□□□ -1.74
ATM-201ENST00000278616 DMXL2Q8TDJ6 3036 aa4.14□□□□□ -1.75
ATM-201ENST00000278616 CHD9Q3L8U1 2897 aa4.14□□□□□ -1.75
ATM-201ENST00000278616 SPTBN5Q9NRC6 3674 aaKnown RBP4.13□□□□□ -1.75
ATM-201ENST00000278616 TACC2O95359 2948 aa4.13□□□□□ -1.75
ATM-201ENST00000278616 ATMQ13315 3056 aa4.12□□□□□ -1.75
ATM-201ENST00000278616 Q6ZRN7 208 aaPredicted RBP4.12□□□□□ -1.75
ATM-201ENST00000278616 CFAP47Q6ZTR5 3102 aa4.12□□□□□ -1.75
ATM-201ENST00000278616 HIVEP1P15822 2718 aa4.12□□□□□ -1.75
ATM-201ENST00000278616 RELNP78509 3460 aa4.1□□□□□ -1.75
ATM-201ENST00000278616 P0C880 135 aa4.09□□□□□ -1.75
ATM-201ENST00000278616 TENM1Q9UKZ4 2725 aa4.09□□□□□ -1.75
ATM-201ENST00000278616 KRTAP10-8P60410 259 aa4.09□□□□□ -1.75
ATM-201ENST00000278616 ADGRG4Q8IZF6 3080 aa4.09□□□□□ -1.76
ATM-201ENST00000278616 ZZEF1O43149 2961 aa4.08□□□□□ -1.76
ATM-201ENST00000278616 KRTAP13-2Q52LG2 175 aa4.07□□□□□ -1.76
ATM-201ENST00000278616 TENM3Q9P273 2699 aa4.07□□□□□ -1.76
ATM-201ENST00000278616 DMXL1Q9Y485 3027 aa4.06□□□□□ -1.76
ATM-201ENST00000278616 NBEAQ8NFP9 2946 aa4.06□□□□□ -1.76
ATM-201ENST00000278616 TGP01266 2768 aa4.06□□□□□ -1.76
ATM-201ENST00000278616 H0YAA0 97 aa4.06□□□□□ -1.76
ATM-201ENST00000278616 KRTAP7-1Q8IUC3 87 aa4.06□□□□□ -1.76
ATM-201ENST00000278616 KRTAP13-1Q8IUC0 172 aa4.05□□□□□ -1.76
ATM-201ENST00000278616 CELSR2Q9HCU4 2923 aa4.05□□□□□ -1.76
ATM-201ENST00000278616 A0A1B0GVY2 172 aa4.05□□□□□ -1.76
ATM-201ENST00000278616 NF1P21359 2839 aa4.03□□□□□ -1.76
ATM-201ENST00000278616 ZFHX4Q86UP3 3567 aa4.03□□□□□ -1.76
ATM-201ENST00000278616 TNRC18O15417 2968 aaPredicted RBP4.02□□□□□ -1.77
ATM-201ENST00000278616 PRO2289Q9P1D8 64 aa4.02□□□□□ -1.77
ATM-201ENST00000278616 DCHS1Q96JQ0 3298 aa4.02□□□□□ -1.77
ATM-201ENST00000278616 LAMA5O15230 3695 aa4.01□□□□□ -1.77
ATM-201ENST00000278616 LOC400499M0QZD8 3231 aa3.99□□□□□ -1.77
ATM-201ENST00000278616 NIPBLQ6KC79 2804 aaeCLIP3.98□□□□□ -1.77
ATM-201ENST00000278616 CELSR1Q9NYQ6 3014 aa3.98□□□□□ -1.77
ATM-201ENST00000278616 SPENQ96T58 3664 aaKnown RBP3.96□□□□□ -1.77
ATM-201ENST00000278616 NBPF19A0A087WUL8 3843 aa3.96□□□□□ -1.78
ATM-201ENST00000278616 PDZD2O15018 2839 aa3.95□□□□□ -1.78
ATM-201ENST00000278616 FLNCQ14315 2725 aa3.94□□□□□ -1.78
ATM-201ENST00000278616 CSMD1Q96PZ7 3565 aa3.92□□□□□ -1.78
ATM-201ENST00000278616 XP32Q5T750 250 aa3.91□□□□□ -1.78
ATM-201ENST00000278616 SRRM2Q9UQ35 2752 aaKnown RBP3.91□□□□□ -1.78
ATM-201ENST00000278616 SMG1Q96Q15 3661 aaKnown RBP3.9□□□□□ -1.79
ATM-201ENST00000278616 EYSQ5T1H1 3165 aa3.9□□□□□ -1.79
ATM-201ENST00000278616 DCHS2Q6V1P9 2916 aa3.9□□□□□ -1.79
ATM-201ENST00000278616 DMDP11532 3685 aa3.88□□□□□ -1.79
ATM-201ENST00000278616 KRTAP10-10P60014 251 aa3.87□□□□□ -1.79
ATM-201ENST00000278616 FBN2P35556 2912 aa3.85□□□□□ -1.79
ATM-201ENST00000278616 TPRXLQ17RH7 258 aa3.85□□□□□ -1.79
ATM-201ENST00000278616 ZANQ9Y493 2812 aa3.82□□□□□ -1.8
ATM-201ENST00000278616 MXRA5Q9NR99 2828 aa3.81□□□□□ -1.8
ATM-201ENST00000278616 KRTAP1-4P0C5Y4 121 aa3.8□□□□□ -1.8
ATM-201ENST00000278616 HRNRQ86YZ3 2850 aaPredicted RBP3.79□□□□□ -1.8
ATM-201ENST00000278616 VWFP04275 2813 aa3.78□□□□□ -1.8
ATM-201ENST00000278616 KRTAP13-4Q3LI77 160 aa3.78□□□□□ -1.8
ATM-201ENST00000278616 KRTAP12-2P59991 146 aa3.78□□□□□ -1.8
ATM-201ENST00000278616 CUBNO60494 3623 aa3.78□□□□□ -1.8
ATM-201ENST00000278616 MUC3AQ02505 3323 aa3.78□□□□□ -1.8
ATM-201ENST00000278616 ZFHX3Q15911 3703 aa3.77□□□□□ -1.81
ATM-201ENST00000278616 SVEP1Q4LDE5 3571 aa3.75□□□□□ -1.81
ATM-201ENST00000278616 TENM4Q6N022 2769 aa3.74□□□□□ -1.81
ATM-201ENST00000278616 KRTAP13-3Q3SY46 172 aa3.73□□□□□ -1.81
ATM-201ENST00000278616 PKD1L1Q8TDX9 2849 aa3.71□□□□□ -1.81
ATM-201ENST00000278616 INE1O15225 51 aa3.71□□□□□ -1.82
ATM-201ENST00000278616 TENM2Q9NT68 2774 aa3.7□□□□□ -1.82
ATM-201ENST00000278616 COL7A1Q02388 2944 aa3.68□□□□□ -1.82
ATM-201ENST00000278616 KRTAP12-1P59990 96 aa3.68□□□□□ -1.82
ATM-201ENST00000278616 KRTAP15-1Q3LI76 137 aa3.66□□□□□ -1.82
ATM-201ENST00000278616 KRTAP21-3Q3LHN1 58 aa3.64□□□□□ -1.83
ATM-201ENST00000278616 MEGF8Q7Z7M0 2845 aa3.61□□□□□ -1.83
ATM-201ENST00000278616 CSMD2Q7Z408 3487 aa3.61□□□□□ -1.83
ATM-201ENST00000278616 VPS13CQ709C8 3753 aa3.56□□□□□ -1.84
ATM-201ENST00000278616 CSMD3Q7Z407 3707 aa3.52□□□□□ -1.85
ATM-201ENST00000278616 FBN3Q75N90 2809 aa3.5□□□□□ -1.85
ATM-201ENST00000278616 CRCT1Q9UGL9 99 aa3.49□□□□□ -1.85
ATM-201ENST00000278616 KRTAP3-1Q9BYR8 98 aa3.46□□□□□ -1.86
ATM-201ENST00000278616 OTOGQ6ZRI0 2925 aa3.46□□□□□ -1.86
ATM-201ENST00000278616 KRTAP10-6P60371 365 aaPredicted RBP3.43□□□□□ -1.86
ATM-201ENST00000278616 TRRAPQ9Y4A5 3859 aa3.43□□□□□ -1.86
ATM-201ENST00000278616 KRTAP10-12P60413 245 aa3.43□□□□□ -1.86
ATM-201ENST00000278616 BSNQ9UPA5 3926 aa3.4□□□□□ -1.86
ATM-201ENST00000278616 FBN1P35555 2871 aaKnown RBP3.39□□□□□ -1.87
ATM-201ENST00000278616 AKAP9Q99996 3911 aa3.33□□□□□ -1.88
ATM-201ENST00000278616 KRTAP12-3P60328 96 aa3.32□□□□□ -1.88
ATM-201ENST00000278616 KRTAP23-1A1A580 65 aa3.3□□□□□ -1.88
ATM-201ENST00000278616 KRTAP3-3Q9BYR6 98 aa3.26□□□□□ -1.89
ATM-201ENST00000278616 KRTAP3-2Q9BYR7 98 aa3.25□□□□□ -1.89
ATM-201ENST00000278616 KRTAP10-5P60370 271 aa3.23□□□□□ -1.89
ATM-201ENST00000278616 LCE3AQ5TA76 89 aa3.22□□□□□ -1.89
ATM-201ENST00000278616 ZNF469Q96JG9 3925 aaPredicted RBP3.2□□□□□ -1.9
ATM-201ENST00000278616 KRTAP4-5Q9BYR2 181 aa3.18□□□□□ -1.9
ATM-201ENST00000278616 LORP23490 312 aaPredicted RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms