RNA–Protein interactions for RNA: ENST00000278193.6

LIN7C-201, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN7C, Length 4,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-201ENST00000278193 KRTAP11-1Q8IUC1 163 aa3.62□□□□□ -1.83
LIN7C-201ENST00000278193 TEX15Q9BXT5 2789 aa3.62□□□□□ -1.83
LIN7C-201ENST00000278193 C6orf48Q9UBA6 75 aa3.62□□□□□ -1.83
LIN7C-201ENST00000278193 CSMD2Q7Z408 3487 aa3.61□□□□□ -1.83
LIN7C-201ENST00000278193 INE1O15225 51 aa3.61□□□□□ -1.83
LIN7C-201ENST00000278193 SMR3BP02814 79 aaPredicted RBP3.61□□□□□ -1.83
LIN7C-201ENST00000278193 CRYBG3Q68DQ2 2970 aa3.6□□□□□ -1.83
LIN7C-201ENST00000278193 TP53AIP1Q9HCN2 124 aa3.6□□□□□ -1.83
LIN7C-201ENST00000278193 FLNCQ14315 2725 aa3.6□□□□□ -1.83
LIN7C-201ENST00000278193 PRLHP81277 87 aa3.59□□□□□ -1.83
LIN7C-201ENST00000278193 PP632Q6XCG6 107 aa3.58□□□□□ -1.84
LIN7C-201ENST00000278193 ADGRG4Q8IZF6 3080 aa3.58□□□□□ -1.84
LIN7C-201ENST00000278193 HIVEP1P15822 2718 aa3.58□□□□□ -1.84
LIN7C-201ENST00000278193 VPS13CQ709C8 3753 aa3.56□□□□□ -1.84
LIN7C-201ENST00000278193 ZFHX3Q15911 3703 aa3.55□□□□□ -1.84
LIN7C-201ENST00000278193 ITPR2Q14571 2701 aa3.55□□□□□ -1.84
LIN7C-201ENST00000278193 NBEAL1Q6ZS30 2694 aa3.54□□□□□ -1.84
LIN7C-201ENST00000278193 TACC2O95359 2948 aa3.54□□□□□ -1.84
LIN7C-201ENST00000278193 DCHS2Q6V1P9 2916 aa3.54□□□□□ -1.84
LIN7C-201ENST00000278193 CELSR2Q9HCU4 2923 aa3.54□□□□□ -1.84
LIN7C-201ENST00000278193 NOTCH1P46531 2555 aa3.54□□□□□ -1.84
LIN7C-201ENST00000278193 UBR5O95071 2799 aaPredicted RBP3.53□□□□□ -1.84
LIN7C-201ENST00000278193 KRTAP7-1Q8IUC3 87 aa3.52□□□□□ -1.85
LIN7C-201ENST00000278193 NSD1Q96L73 2696 aaPredicted RBP3.52□□□□□ -1.85
LIN7C-201ENST00000278193 Q5VSD8 79 aa3.52□□□□□ -1.85
LIN7C-201ENST00000278193 MAP1AP78559 2803 aaPredicted RBP3.52□□□□□ -1.85
LIN7C-201ENST00000278193 DSCR10P59022 87 aa3.52□□□□□ -1.85
LIN7C-201ENST00000278193 CELSR1Q9NYQ6 3014 aa3.52□□□□□ -1.85
LIN7C-201ENST00000278193 LRBAP50851 2863 aa3.5□□□□□ -1.85
LIN7C-201ENST00000278193 K7EQZ3 153 aa3.5□□□□□ -1.85
LIN7C-201ENST00000278193 SVEP1Q4LDE5 3571 aa3.49□□□□□ -1.85
LIN7C-201ENST00000278193 ANAPC11Q9NYG5 84 aa3.49□□□□□ -1.85
LIN7C-201ENST00000278193 COX6B2Q6YFQ2 88 aa3.49□□□□□ -1.85
LIN7C-201ENST00000278193 FLG2Q5D862 2391 aaPredicted RBP3.48□□□□□ -1.85
LIN7C-201ENST00000278193 APCP25054 2843 aa3.47□□□□□ -1.85
LIN7C-201ENST00000278193 SPINK1P00995 79 aa3.47□□□□□ -1.85
LIN7C-201ENST00000278193 KRTAP29-1A8MX34 341 aaPredicted RBP3.47□□□□□ -1.85
LIN7C-201ENST00000278193 MRPL34Q9BQ48 92 aaKnown RBP3.47□□□□□ -1.85
LIN7C-201ENST00000278193 ZNF469Q96JG9 3925 aaPredicted RBP3.47□□□□□ -1.85
LIN7C-201ENST00000278193 FBN2P35556 2912 aa3.46□□□□□ -1.86
LIN7C-201ENST00000278193 KRTAP10-1P60331 282 aa3.45□□□□□ -1.86
LIN7C-201ENST00000278193 KRTAP19-4Q3LI73 84 aa3.45□□□□□ -1.86
LIN7C-201ENST00000278193 KRTAP1-5Q9BYS1 174 aa3.44□□□□□ -1.86
LIN7C-201ENST00000278193 KRTAP10-2P60368 255 aa3.44□□□□□ -1.86
LIN7C-201ENST00000278193 AKAP9Q99996 3911 aa3.43□□□□□ -1.86
LIN7C-201ENST00000278193 DNHD1Q96M86 4753 aa3.42□□□□□ -1.86
LIN7C-201ENST00000278193 HRNRQ86YZ3 2850 aaPredicted RBP3.4□□□□□ -1.86
LIN7C-201ENST00000278193 OTOGQ6ZRI0 2925 aa3.4□□□□□ -1.87
LIN7C-201ENST00000278193 CUBNO60494 3623 aa3.39□□□□□ -1.87
LIN7C-201ENST00000278193 STAB2Q8WWQ8 2551 aa3.39□□□□□ -1.87
LIN7C-201ENST00000278193 PDZD2O15018 2839 aa3.38□□□□□ -1.87
LIN7C-201ENST00000278193 Q6ZRN7 208 aaPredicted RBP3.38□□□□□ -1.87
LIN7C-201ENST00000278193 FBN3Q75N90 2809 aa3.38□□□□□ -1.87
LIN7C-201ENST00000278193 IGFL1Q6UW32 110 aa3.37□□□□□ -1.87
LIN7C-201ENST00000278193 Q6ZSA8 131 aa3.37□□□□□ -1.87
LIN7C-201ENST00000278193 NF1P21359 2839 aa3.36□□□□□ -1.87
LIN7C-201ENST00000278193 ZANQ9Y493 2812 aa3.36□□□□□ -1.87
LIN7C-201ENST00000278193 NIPBLQ6KC79 2804 aaeCLIP3.36□□□□□ -1.87
LIN7C-201ENST00000278193 RPL37P61927 97 aaKnown RBP3.35□□□□□ -1.87
LIN7C-201ENST00000278193 C9orf92A6NGG3 77 aa3.35□□□□□ -1.87
LIN7C-201ENST00000278193 M0R2T5 61 aa3.31□□□□□ -1.88
LIN7C-201ENST00000278193 SPRR1AP35321 89 aa3.31□□□□□ -1.88
LIN7C-201ENST00000278193 IGLV5-48A0A075B6I7 105 aa3.29□□□□□ -1.88
LIN7C-201ENST00000278193 SPRR1BP22528 89 aa3.29□□□□□ -1.88
LIN7C-201ENST00000278193 KRTAP13-2Q52LG2 175 aa3.28□□□□□ -1.88
LIN7C-201ENST00000278193 H1FX-AS1Q4G0G2 97 aa3.28□□□□□ -1.88
LIN7C-201ENST00000278193 C10orf95Q9H7T3 257 aa3.27□□□□□ -1.89
LIN7C-201ENST00000278193 RPS29P62273 56 aaKnown RBP3.26□□□□□ -1.89
LIN7C-201ENST00000278193 MXRA5Q9NR99 2828 aa3.24□□□□□ -1.89
LIN7C-201ENST00000278193 H0YAA0 97 aa3.24□□□□□ -1.89
LIN7C-201ENST00000278193 KRTAP12-2P59991 146 aa3.24□□□□□ -1.89
LIN7C-201ENST00000278193 ANK3Q12955 4377 aaKnown RBP3.23□□□□□ -1.89
LIN7C-201ENST00000278193 DMBT1Q9UGM3 2413 aaPredicted RBP3.23□□□□□ -1.89
LIN7C-201ENST00000278193 FBN1P35555 2871 aaKnown RBP3.23□□□□□ -1.89
LIN7C-201ENST00000278193 NBEAL2Q6ZNJ1 2754 aa3.22□□□□□ -1.89
LIN7C-201ENST00000278193 A0A1B0GVY2 172 aa3.21□□□□□ -1.9
LIN7C-201ENST00000278193 ANK2Q01484 3957 aa3.21□□□□□ -1.9
LIN7C-201ENST00000278193 MMP24-AS1A0A0U1RRL7 71 aa3.19□□□□□ -1.9
LIN7C-201ENST00000278193 TRRAPQ9Y4A5 3859 aa3.17□□□□□ -1.9
LIN7C-201ENST00000278193 TENM1Q9UKZ4 2725 aa3.16□□□□□ -1.9
LIN7C-201ENST00000278193 KRTAP17-1Q9BYP8 105 aa3.16□□□□□ -1.9
LIN7C-201ENST00000278193 TENM2Q9NT68 2774 aa3.15□□□□□ -1.9
LIN7C-201ENST00000278193 PKD1L1Q8TDX9 2849 aa3.13□□□□□ -1.91
LIN7C-201ENST00000278193 KRTAP13-1Q8IUC0 172 aa3.13□□□□□ -1.91
LIN7C-201ENST00000278193 XP32Q5T750 250 aa3.12□□□□□ -1.91
LIN7C-201ENST00000278193 TENM3Q9P273 2699 aa3.11□□□□□ -1.91
LIN7C-201ENST00000278193 VWFP04275 2813 aa3.11□□□□□ -1.91
LIN7C-201ENST00000278193 KRTAP10-8P60410 259 aa3.1□□□□□ -1.91
LIN7C-201ENST00000278193 S4R3F8 94 aa3.09□□□□□ -1.91
LIN7C-201ENST00000278193 A0A0D9SG42 100 aa3.09□□□□□ -1.92
LIN7C-201ENST00000278193 CMYA5Q8N3K9 4069 aa3.07□□□□□ -1.92
LIN7C-201ENST00000278193 KRTAP1-4P0C5Y4 121 aa3.06□□□□□ -1.92
LIN7C-201ENST00000278193 MT3P25713 68 aa3.04□□□□□ -1.92
LIN7C-201ENST00000278193 KRTAP13-4Q3LI77 160 aa3.04□□□□□ -1.92
LIN7C-201ENST00000278193 MEGF8Q7Z7M0 2845 aa3.04□□□□□ -1.92
LIN7C-201ENST00000278193 TGP01266 2768 aa3.03□□□□□ -1.92
LIN7C-201ENST00000278193 RYR3Q15413 4870 aa3.02□□□□□ -1.93
LIN7C-201ENST00000278193 PRKDCP78527 4128 aaKnown RBP3.02□□□□□ -1.93
LIN7C-201ENST00000278193 KMT2CQ8NEZ4 4911 aaKnown RBP3.01□□□□□ -1.93
LIN7C-201ENST00000278193 CSMD3Q7Z407 3707 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms