RNA–Protein interactions for RNA: ENST00000274963.12

FGD2-201, Transcript of FYVE, RhoGEF and PH domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD2, Length 3,046 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD2-201ENST00000274963 CDK2AP2O75956 126 aa9□□□□□ -0.97
FGD2-201ENST00000274963 LINC00483Q53H64 154 aa9□□□□□ -0.97
FGD2-201ENST00000274963 A0A087X002 238 aa8.99□□□□□ -0.97
FGD2-201ENST00000274963 NOTCH2NLQ7Z3S9 236 aa8.99□□□□□ -0.97
FGD2-201ENST00000274963 IGLV7-43P04211 117 aa8.99□□□□□ -0.97
FGD2-201ENST00000274963 HYDINQ4G0P3 5121 aa8.97□□□□□ -0.97
FGD2-201ENST00000274963 PCOTHQ58A44 107 aa8.97□□□□□ -0.97
FGD2-201ENST00000274963 C8orf17Q9NRJ1 99 aa8.95□□□□□ -0.98
FGD2-201ENST00000274963 DNAH5Q8TE73 4624 aa8.94□□□□□ -0.98
FGD2-201ENST00000274963 C4orf48Q5BLP8 95 aa8.94□□□□□ -0.98
FGD2-201ENST00000274963 Q5VV11 94 aa8.94□□□□□ -0.98
FGD2-201ENST00000274963 SPTSSBQ8NFR3 76 aa8.92□□□□□ -0.98
FGD2-201ENST00000274963 A0A1B0GVX0 72 aa8.92□□□□□ -0.98
FGD2-201ENST00000274963 CYP4F30PQ9H0H9 118 aa8.91□□□□□ -0.98
FGD2-201ENST00000274963 LRP1BQ9NZR2 4599 aa8.91□□□□□ -0.98
FGD2-201ENST00000274963 ALMS1Q8TCU4 4167 aa8.9□□□□□ -0.98
FGD2-201ENST00000274963 CHKB-CPT1BH3BT56 60 aa8.9□□□□□ -0.98
FGD2-201ENST00000274963 KRTAP10-1P60331 282 aa8.9□□□□□ -0.98
FGD2-201ENST00000274963 RETNLBQ9BQ08 111 aa8.85□□□□□ -0.99
FGD2-201ENST00000274963 MRPL34Q9BQ48 92 aaKnown RBP8.85□□□□□ -0.99
FGD2-201ENST00000274963 ATP11AUNQ6ZP68 121 aa8.84□□□□□ -0.99
FGD2-201ENST00000274963 LIMD2Q9BT23 127 aa8.82□□□□□ -1
FGD2-201ENST00000274963 PRR15LQ9BU68 103 aa8.81□□□□□ -1
FGD2-201ENST00000274963 H3BPC8 53 aa8.81□□□□□ -1
FGD2-201ENST00000274963 A6NN06 94 aa8.8□□□□□ -1
FGD2-201ENST00000274963 Q8N9P0 234 aaPredicted RBP8.8□□□□□ -1
FGD2-201ENST00000274963 LCA10Q71F78 164 aa8.8□□□□□ -1
FGD2-201ENST00000274963 TP53AIP1Q9HCN2 124 aa8.8□□□□□ -1
FGD2-201ENST00000274963 VPS13BQ7Z7G8 4022 aa8.8□□□□□ -1
FGD2-201ENST00000274963 ASB16-AS1Q495Z4 193 aa8.79□□□□□ -1
FGD2-201ENST00000274963 KRTAP13-2Q52LG2 175 aa8.79□□□□□ -1
FGD2-201ENST00000274963 PKD1P98161 4303 aa8.78□□□□□ -1
FGD2-201ENST00000274963 Q5W150 140 aa8.78□□□□□ -1
FGD2-201ENST00000274963 FAT2Q9NYQ8 4349 aa8.77□□□□□ -1
FGD2-201ENST00000274963 A6NED7 52 aa8.77□□□□□ -1.01
FGD2-201ENST00000274963 PKHD1P08F94 4074 aa8.77□□□□□ -1.01
FGD2-201ENST00000274963 SSBP3-AS1Q7Z2R9 100 aa8.76□□□□□ -1.01
FGD2-201ENST00000274963 C7orf65Q6ZTY9 151 aa8.75□□□□□ -1.01
FGD2-201ENST00000274963 SPANXA2-OT1Q8N9U9 137 aa8.75□□□□□ -1.01
FGD2-201ENST00000274963 C8orf87E5RJ46 101 aa8.74□□□□□ -1.01
FGD2-201ENST00000274963 COA5Q86WW8 74 aa8.73□□□□□ -1.01
FGD2-201ENST00000274963 SMR3BP02814 79 aaPredicted RBP8.72□□□□□ -1.01
FGD2-201ENST00000274963 Q75L30 129 aa8.72□□□□□ -1.01
FGD2-201ENST00000274963 IGLV7-46A0A075B6I9 117 aa8.72□□□□□ -1.01
FGD2-201ENST00000274963 PLA2G1BP04054 148 aaKnown RBP8.72□□□□□ -1.01
FGD2-201ENST00000274963 Q6ZSA8 131 aa8.72□□□□□ -1.01
FGD2-201ENST00000274963 LINC00313P59037 77 aa8.7□□□□□ -1.02
FGD2-201ENST00000274963 CDC42SE1Q9NRR8 79 aa8.7□□□□□ -1.02
FGD2-201ENST00000274963 LOC101927531A0A1B0GV80 90 aa8.67□□□□□ -1.02
FGD2-201ENST00000274963 SPAG11AQ6PDA7 123 aa8.67□□□□□ -1.02
FGD2-201ENST00000274963 KRTAP1-4P0C5Y4 121 aa8.66□□□□□ -1.02
FGD2-201ENST00000274963 H3BS24 57 aa8.66□□□□□ -1.02
FGD2-201ENST00000274963 TYMSOSQ8TAI1 123 aa8.64□□□□□ -1.03
FGD2-201ENST00000274963 HRES1P13985 223 aa8.62□□□□□ -1.03
FGD2-201ENST00000274963 PRR26Q8N8Z3 221 aa8.61□□□□□ -1.03
FGD2-201ENST00000274963 FAT1Q14517 4588 aa8.59□□□□□ -1.03
FGD2-201ENST00000274963 SACSQ9NZJ4 4579 aa8.59□□□□□ -1.03
FGD2-201ENST00000274963 IGKV2D-30A0A075B6S6 120 aa8.57□□□□□ -1.04
FGD2-201ENST00000274963 IGKV2-30P06310 120 aa8.57□□□□□ -1.04
FGD2-201ENST00000274963 KRTAP13-3Q3SY46 172 aa8.57□□□□□ -1.04
FGD2-201ENST00000274963 FAM229AH3BQW9 127 aa8.53□□□□□ -1.04
FGD2-201ENST00000274963 DYNC1H1Q14204 4646 aaKnown RBP8.52□□□□□ -1.05
FGD2-201ENST00000274963 PRAC1Q96KF2 57 aa8.52□□□□□ -1.05
FGD2-201ENST00000274963 LINC01558Q9Y6Z2 57 aa8.51□□□□□ -1.05
FGD2-201ENST00000274963 SPINK7P58062 85 aa8.5□□□□□ -1.05
FGD2-201ENST00000274963 KRTAP16-1A8MUX0 517 aa8.49□□□□□ -1.05
FGD2-201ENST00000274963 LINC00304Q8N9R0 145 aa8.48□□□□□ -1.05
FGD2-201ENST00000274963 SPINK1P00995 79 aa8.48□□□□□ -1.05
FGD2-201ENST00000274963 LINC01554Q52M75 96 aa8.47□□□□□ -1.05
FGD2-201ENST00000274963 C9orf92A6NGG3 77 aa8.46□□□□□ -1.05
FGD2-201ENST00000274963 ACYP2P14621 99 aa8.46□□□□□ -1.06
FGD2-201ENST00000274963 KMT2CQ8NEZ4 4911 aaKnown RBP8.45□□□□□ -1.06
FGD2-201ENST00000274963 ADM2Q7Z4H4 148 aa8.42□□□□□ -1.06
FGD2-201ENST00000274963 KRTAP21-3Q3LHN1 58 aa8.39□□□□□ -1.07
FGD2-201ENST00000274963 DMAC1Q96GE9 116 aa8.37□□□□□ -1.07
FGD2-201ENST00000274963 Q8N1X5 172 aa8.37□□□□□ -1.07
FGD2-201ENST00000274963 APOBP04114 4563 aaKnown RBP8.35□□□□□ -1.07
FGD2-201ENST00000274963 DMBT1Q9UGM3 2413 aaPredicted RBP8.34□□□□□ -1.07
FGD2-201ENST00000274963 FLG2Q5D862 2391 aaPredicted RBP8.34□□□□□ -1.08
FGD2-201ENST00000274963 A0A1B0GVY2 172 aa8.33□□□□□ -1.08
FGD2-201ENST00000274963 RYR2Q92736 4967 aa8.3□□□□□ -1.08
FGD2-201ENST00000274963 LRP1Q07954 4544 aaKnown RBP8.29□□□□□ -1.08
FGD2-201ENST00000274963 KRTAP10-4P60372 401 aaPredicted RBP8.27□□□□□ -1.09
FGD2-201ENST00000274963 A0A1B0GU69 56 aa8.26□□□□□ -1.09
FGD2-201ENST00000274963 RPS29P62273 56 aaKnown RBP8.19□□□□□ -1.1
FGD2-201ENST00000274963 MYCBP2O75592 4640 aa8.17□□□□□ -1.1
FGD2-201ENST00000274963 CSAG1Q6PB30 78 aa8.16□□□□□ -1.1
FGD2-201ENST00000274963 PKHD1L1Q86WI1 4243 aa8.16□□□□□ -1.1
FGD2-201ENST00000274963 SPATA8Q6RVD6 105 aa8.12□□□□□ -1.11
FGD2-201ENST00000274963 RYR3Q15413 4870 aa8.12□□□□□ -1.11
FGD2-201ENST00000274963 A8MUU9 505 aa8.12□□□□□ -1.11
FGD2-201ENST00000274963 C20orf166-AS1Q96NR2 134 aa8.11□□□□□ -1.11
FGD2-201ENST00000274963 Q5VSD8 79 aa8.11□□□□□ -1.11
FGD2-201ENST00000274963 MIR22HGQ0VDD5 57 aa8.06□□□□□ -1.12
FGD2-201ENST00000274963 HSPG2P98160 4391 aa8.06□□□□□ -1.12
FGD2-201ENST00000274963 KRTAP3-1Q9BYR8 98 aa8.05□□□□□ -1.12
FGD2-201ENST00000274963 KIAA1109Q2LD37 5005 aa8.05□□□□□ -1.12
FGD2-201ENST00000274963 UQCR11O14957 56 aa8.04□□□□□ -1.12
FGD2-201ENST00000274963 KRTAP17-1Q9BYP8 105 aa8.02□□□□□ -1.13
FGD2-201ENST00000274963 FAT3Q8TDW7 4589 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms