RNA–Protein interactions for RNA: ENST00000268673.11

PDPK1-201, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-201ENST00000268673 LINC00483Q53H64 154 aa8.87□□□□□ -0.99
PDPK1-201ENST00000268673 KRTAP7-1Q8IUC3 87 aa8.87□□□□□ -0.99
PDPK1-201ENST00000268673 A0A1B0GU33 70 aa8.85□□□□□ -0.99
PDPK1-201ENST00000268673 CSAG1Q6PB30 78 aa8.85□□□□□ -0.99
PDPK1-201ENST00000268673 KMT2BQ9UMN6 2715 aaPredicted RBP8.85□□□□□ -0.99
PDPK1-201ENST00000268673 CRIPTQ9P021 101 aa8.84□□□□□ -0.99
PDPK1-201ENST00000268673 TENM4Q6N022 2769 aa8.84□□□□□ -0.99
PDPK1-201ENST00000268673 A8MU10 97 aa8.84□□□□□ -0.99
PDPK1-201ENST00000268673 H3BS24 57 aa8.82□□□□□ -1
PDPK1-201ENST00000268673 NIPBLQ6KC79 2804 aaeCLIP8.82□□□□□ -1
PDPK1-201ENST00000268673 CELSR2Q9HCU4 2923 aa8.81□□□□□ -1
PDPK1-201ENST00000268673 CRYBG3Q68DQ2 2970 aa8.8□□□□□ -1
PDPK1-201ENST00000268673 SPATA8Q6RVD6 105 aa8.77□□□□□ -1.01
PDPK1-201ENST00000268673 MXRA5Q9NR99 2828 aa8.77□□□□□ -1.01
PDPK1-201ENST00000268673 APCP25054 2843 aa8.75□□□□□ -1.01
PDPK1-201ENST00000268673 KRTAP11-1Q8IUC1 163 aa8.73□□□□□ -1.01
PDPK1-201ENST00000268673 Q6ZSA8 131 aa8.73□□□□□ -1.01
PDPK1-201ENST00000268673 A0A087X002 238 aa8.72□□□□□ -1.01
PDPK1-201ENST00000268673 NOTCH2NLQ7Z3S9 236 aa8.72□□□□□ -1.01
PDPK1-201ENST00000268673 PANO1I0J062 215 aa8.72□□□□□ -1.01
PDPK1-201ENST00000268673 FBN2P35556 2912 aa8.71□□□□□ -1.01
PDPK1-201ENST00000268673 KRTAP10-1P60331 282 aa8.69□□□□□ -1.02
PDPK1-201ENST00000268673 KRTAP10-2P60368 255 aa8.69□□□□□ -1.02
PDPK1-201ENST00000268673 A0A0D9SG42 100 aa8.69□□□□□ -1.02
PDPK1-201ENST00000268673 ZFHX3Q15911 3703 aa8.67□□□□□ -1.02
PDPK1-201ENST00000268673 NF1P21359 2839 aa8.67□□□□□ -1.02
PDPK1-201ENST00000268673 KRTAP13-1Q8IUC0 172 aa8.64□□□□□ -1.03
PDPK1-201ENST00000268673 ADM2Q7Z4H4 148 aa8.57□□□□□ -1.04
PDPK1-201ENST00000268673 CSMD2Q7Z408 3487 aa8.57□□□□□ -1.04
PDPK1-201ENST00000268673 VPS13CQ709C8 3753 aa8.56□□□□□ -1.04
PDPK1-201ENST00000268673 Q5VSD8 79 aa8.56□□□□□ -1.04
PDPK1-201ENST00000268673 H1FX-AS1Q4G0G2 97 aa8.55□□□□□ -1.04
PDPK1-201ENST00000268673 Q6ZRN7 208 aaPredicted RBP8.51□□□□□ -1.05
PDPK1-201ENST00000268673 ROMO1P60602 79 aa8.49□□□□□ -1.05
PDPK1-201ENST00000268673 RPL37P61927 97 aaKnown RBP8.49□□□□□ -1.05
PDPK1-201ENST00000268673 M0R2T5 61 aa8.46□□□□□ -1.06
PDPK1-201ENST00000268673 TENM3Q9P273 2699 aa8.45□□□□□ -1.06
PDPK1-201ENST00000268673 KRTAP25-1Q3LHN0 102 aa8.45□□□□□ -1.06
PDPK1-201ENST00000268673 CAMK2N1Q7Z7J9 78 aa8.42□□□□□ -1.06
PDPK1-201ENST00000268673 SEC61BP60468 96 aaKnown RBP8.41□□□□□ -1.06
PDPK1-201ENST00000268673 S4R3F8 94 aa8.41□□□□□ -1.06
PDPK1-201ENST00000268673 PDZD2O15018 2839 aa8.34□□□□□ -1.07
PDPK1-201ENST00000268673 LUZP6Q538Z0 58 aa8.33□□□□□ -1.08
PDPK1-201ENST00000268673 KRTAP13-2Q52LG2 175 aa8.33□□□□□ -1.08
PDPK1-201ENST00000268673 TENM1Q9UKZ4 2725 aa8.3□□□□□ -1.08
PDPK1-201ENST00000268673 R4GN34 69 aa8.3□□□□□ -1.08
PDPK1-201ENST00000268673 RPS29P62273 56 aaKnown RBP8.29□□□□□ -1.08
PDPK1-201ENST00000268673 VWFP04275 2813 aa8.23□□□□□ -1.09
PDPK1-201ENST00000268673 KRTAP21-3Q3LHN1 58 aa8.21□□□□□ -1.1
PDPK1-201ENST00000268673 ANK3Q12955 4377 aaKnown RBP8.2□□□□□ -1.1
PDPK1-201ENST00000268673 PKD1L1Q8TDX9 2849 aa8.18□□□□□ -1.1
PDPK1-201ENST00000268673 A8MUU9 505 aa8.16□□□□□ -1.1
PDPK1-201ENST00000268673 KRTAP13-3Q3SY46 172 aa8.14□□□□□ -1.11
PDPK1-201ENST00000268673 NBPF19A0A087WUL8 3843 aa8.14□□□□□ -1.11
PDPK1-201ENST00000268673 M0QZ58 72 aa8.13□□□□□ -1.11
PDPK1-201ENST00000268673 A0A0A0MQY5 61 aa8.09□□□□□ -1.11
PDPK1-201ENST00000268673 TENM2Q9NT68 2774 aa8.09□□□□□ -1.11
PDPK1-201ENST00000268673 H0YAA0 97 aa8.08□□□□□ -1.12
PDPK1-201ENST00000268673 KRTAP16-1A8MUX0 517 aa8.08□□□□□ -1.12
PDPK1-201ENST00000268673 AKAP9Q99996 3911 aa8.08□□□□□ -1.12
PDPK1-201ENST00000268673 ZNF469Q96JG9 3925 aaPredicted RBP8.07□□□□□ -1.12
PDPK1-201ENST00000268673 C20orf166-AS1Q96NR2 134 aa8.07□□□□□ -1.12
PDPK1-201ENST00000268673 OTOGQ6ZRI0 2925 aa8.05□□□□□ -1.12
PDPK1-201ENST00000268673 NDUFAF8A1L188 74 aa8.03□□□□□ -1.12
PDPK1-201ENST00000268673 KRTAP1-4P0C5Y4 121 aa8.01□□□□□ -1.13
PDPK1-201ENST00000268673 TGP01266 2768 aa7.95□□□□□ -1.14
PDPK1-201ENST00000268673 TRRAPQ9Y4A5 3859 aa7.91□□□□□ -1.14
PDPK1-201ENST00000268673 FBN1P35555 2871 aaKnown RBP7.9□□□□□ -1.14
PDPK1-201ENST00000268673 PLAC4Q8WY50 150 aa7.89□□□□□ -1.15
PDPK1-201ENST00000268673 SRRM2Q9UQ35 2752 aaKnown RBP7.82□□□□□ -1.16
PDPK1-201ENST00000268673 C10orf95Q9H7T3 257 aa7.81□□□□□ -1.16
PDPK1-201ENST00000268673 XP32Q5T750 250 aa7.71□□□□□ -1.18
PDPK1-201ENST00000268673 P0C880 135 aa7.67□□□□□ -1.18
PDPK1-201ENST00000268673 PP632Q6XCG6 107 aa7.57□□□□□ -1.2
PDPK1-201ENST00000268673 TPRXLQ17RH7 258 aa7.57□□□□□ -1.2
PDPK1-201ENST00000268673 KRTAP3-1Q9BYR8 98 aa7.56□□□□□ -1.2
PDPK1-201ENST00000268673 HUWE1Q7Z6Z7 4374 aaKnown RBP7.55□□□□□ -1.2
PDPK1-201ENST00000268673 CSMD3Q7Z407 3707 aa7.52□□□□□ -1.21
PDPK1-201ENST00000268673 TNP1P09430 55 aa7.5□□□□□ -1.21
PDPK1-201ENST00000268673 FBN3Q75N90 2809 aa7.48□□□□□ -1.21
PDPK1-201ENST00000268673 A0A1B0GVY2 172 aa7.47□□□□□ -1.21
PDPK1-201ENST00000268673 KRTAP10-8P60410 259 aa7.46□□□□□ -1.22
PDPK1-201ENST00000268673 COL7A1Q02388 2944 aa7.45□□□□□ -1.22
PDPK1-201ENST00000268673 KRTAP12-2P59991 146 aa7.44□□□□□ -1.22
PDPK1-201ENST00000268673 KRTAP12-1P59990 96 aa7.37□□□□□ -1.23
PDPK1-201ENST00000268673 KRTAP10-6P60371 365 aaPredicted RBP7.37□□□□□ -1.23
PDPK1-201ENST00000268673 KRTAP13-4Q3LI77 160 aa7.33□□□□□ -1.24
PDPK1-201ENST00000268673 MEGF8Q7Z7M0 2845 aa7.33□□□□□ -1.24
PDPK1-201ENST00000268673 DNAH10Q8IVF4 4471 aa7.32□□□□□ -1.24
PDPK1-201ENST00000268673 KRTAP10-10P60014 251 aa7.3□□□□□ -1.24
PDPK1-201ENST00000268673 DNAH9Q9NYC9 4486 aa7.28□□□□□ -1.24
PDPK1-201ENST00000268673 DNAH3Q8TD57 4116 aa7.24□□□□□ -1.25
PDPK1-201ENST00000268673 ANK2Q01484 3957 aa7.24□□□□□ -1.25
PDPK1-201ENST00000268673 DNAH1Q9P2D7 4330 aa7.22□□□□□ -1.25
PDPK1-201ENST00000268673 PLECQ15149 4684 aaKnown RBP7.21□□□□□ -1.26
PDPK1-201ENST00000268673 KRTAP15-1Q3LI76 137 aa7.2□□□□□ -1.26
PDPK1-201ENST00000268673 CMYA5Q8N3K9 4069 aa7.19□□□□□ -1.26
PDPK1-201ENST00000268673 KRTAP3-2Q9BYR7 98 aa7.16□□□□□ -1.26
PDPK1-201ENST00000268673 KRTAP3-3Q9BYR6 98 aa7.13□□□□□ -1.27
PDPK1-201ENST00000268673 VPS13DQ5THJ4 4388 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms