RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 LCA10Q71F78 164 aa7.77□□□□□ -1.17
PRPF6-201ENST00000266079 SPTSSBQ8NFR3 76 aa7.77□□□□□ -1.17
PRPF6-201ENST00000266079 REG3GQ6UW15 175 aa7.76□□□□□ -1.17
PRPF6-201ENST00000266079 SPACA4Q8TDM5 124 aa7.76□□□□□ -1.17
PRPF6-201ENST00000266079 LOC101927531A0A1B0GV80 90 aa7.76□□□□□ -1.17
PRPF6-201ENST00000266079 EPPK1P58107 5090 aaKnown RBP7.75□□□□□ -1.17
PRPF6-201ENST00000266079 IGLV8-61A0A075B6I0 122 aa7.75□□□□□ -1.17
PRPF6-201ENST00000266079 A6NED7 52 aa7.74□□□□□ -1.17
PRPF6-201ENST00000266079 KRTAP11-1Q8IUC1 163 aa7.74□□□□□ -1.17
PRPF6-201ENST00000266079 RBM12B-AS1Q9P1G2 102 aa7.74□□□□□ -1.17
PRPF6-201ENST00000266079 COA5Q86WW8 74 aa7.73□□□□□ -1.17
PRPF6-201ENST00000266079 A0A1B0GVY2 172 aa7.72□□□□□ -1.17
PRPF6-201ENST00000266079 NDUFS5O43920 106 aa7.72□□□□□ -1.17
PRPF6-201ENST00000266079 CIRBP-AS1Q8TBR5 109 aa7.72□□□□□ -1.17
PRPF6-201ENST00000266079 A6NN06 94 aa7.71□□□□□ -1.17
PRPF6-201ENST00000266079 IGLV7-46A0A075B6I9 117 aa7.7□□□□□ -1.18
PRPF6-201ENST00000266079 A8MWP4 228 aa7.7□□□□□ -1.18
PRPF6-201ENST00000266079 CDC42SE1Q9NRR8 79 aa7.69□□□□□ -1.18
PRPF6-201ENST00000266079 FAT1Q14517 4588 aa7.69□□□□□ -1.18
PRPF6-201ENST00000266079 PRLHP81277 87 aa7.68□□□□□ -1.18
PRPF6-201ENST00000266079 LINC00472Q9H8W2 130 aa7.68□□□□□ -1.18
PRPF6-201ENST00000266079 SMR3BP02814 79 aaPredicted RBP7.66□□□□□ -1.18
PRPF6-201ENST00000266079 PLAC8Q9NZF1 115 aa7.66□□□□□ -1.18
PRPF6-201ENST00000266079 APOBP04114 4563 aaKnown RBP7.66□□□□□ -1.18
PRPF6-201ENST00000266079 KIAA1109Q2LD37 5005 aa7.66□□□□□ -1.18
PRPF6-201ENST00000266079 LINC01558Q9Y6Z2 57 aa7.65□□□□□ -1.18
PRPF6-201ENST00000266079 Q6ZSA8 131 aa7.64□□□□□ -1.19
PRPF6-201ENST00000266079 MMP24-AS1A0A0U1RRL7 71 aa7.64□□□□□ -1.19
PRPF6-201ENST00000266079 PSORS1C2Q9UIG4 136 aa7.62□□□□□ -1.19
PRPF6-201ENST00000266079 PCOTHQ58A44 107 aa7.62□□□□□ -1.19
PRPF6-201ENST00000266079 MOBPQ13875 183 aa7.62□□□□□ -1.19
PRPF6-201ENST00000266079 C7orf65Q6ZTY9 151 aa7.62□□□□□ -1.19
PRPF6-201ENST00000266079 VPS13BQ7Z7G8 4022 aa7.62□□□□□ -1.19
PRPF6-201ENST00000266079 H0Y9J4 135 aa7.61□□□□□ -1.19
PRPF6-201ENST00000266079 SPAG11AQ6PDA7 123 aa7.61□□□□□ -1.19
PRPF6-201ENST00000266079 SPRR1BP22528 89 aa7.6□□□□□ -1.19
PRPF6-201ENST00000266079 TP53AIP1Q9HCN2 124 aa7.57□□□□□ -1.2
PRPF6-201ENST00000266079 SPINK7P58062 85 aa7.56□□□□□ -1.2
PRPF6-201ENST00000266079 ASB16-AS1Q495Z4 193 aa7.55□□□□□ -1.2
PRPF6-201ENST00000266079 RYR1P21817 5038 aa7.54□□□□□ -1.2
PRPF6-201ENST00000266079 HRES1P13985 223 aa7.54□□□□□ -1.2
PRPF6-201ENST00000266079 HSPG2P98160 4391 aa7.53□□□□□ -1.2
PRPF6-201ENST00000266079 ANAPC11Q9NYG5 84 aa7.51□□□□□ -1.21
PRPF6-201ENST00000266079 FLG2Q5D862 2391 aaPredicted RBP7.5□□□□□ -1.21
PRPF6-201ENST00000266079 Q96NJ1 140 aa7.5□□□□□ -1.21
PRPF6-201ENST00000266079 C8orf17Q9NRJ1 99 aa7.5□□□□□ -1.21
PRPF6-201ENST00000266079 IGLV7-43P04211 117 aa7.49□□□□□ -1.21
PRPF6-201ENST00000266079 KRTAP13-1Q8IUC0 172 aa7.48□□□□□ -1.21
PRPF6-201ENST00000266079 ZNF861PO60384 105 aa7.47□□□□□ -1.21
PRPF6-201ENST00000266079 KRTAP17-1Q9BYP8 105 aa7.44□□□□□ -1.22
PRPF6-201ENST00000266079 IGHV6-1A0A0B4J1U7 121 aa7.43□□□□□ -1.22
PRPF6-201ENST00000266079 A0A1B0GVX0 72 aa7.43□□□□□ -1.22
PRPF6-201ENST00000266079 PRR26Q8N8Z3 221 aa7.43□□□□□ -1.22
PRPF6-201ENST00000266079 MRPL34Q9BQ48 92 aaKnown RBP7.43□□□□□ -1.22
PRPF6-201ENST00000266079 LINC00313P59037 77 aa7.42□□□□□ -1.22
PRPF6-201ENST00000266079 C8orf87E5RJ46 101 aa7.41□□□□□ -1.22
PRPF6-201ENST00000266079 IGLV9-49A0A0B4J1Y8 123 aa7.41□□□□□ -1.22
PRPF6-201ENST00000266079 CDK2AP2O75956 126 aa7.4□□□□□ -1.22
PRPF6-201ENST00000266079 Q5VSD8 79 aa7.4□□□□□ -1.22
PRPF6-201ENST00000266079 BIRC6Q9NR09 4857 aa7.39□□□□□ -1.23
PRPF6-201ENST00000266079 FAM229AH3BQW9 127 aa7.39□□□□□ -1.23
PRPF6-201ENST00000266079 LRP1Q07954 4544 aaKnown RBP7.38□□□□□ -1.23
PRPF6-201ENST00000266079 PRAC1Q96KF2 57 aa7.38□□□□□ -1.23
PRPF6-201ENST00000266079 MYCBP2O75592 4640 aa7.38□□□□□ -1.23
PRPF6-201ENST00000266079 KRTAP10-4P60372 401 aaPredicted RBP7.36□□□□□ -1.23
PRPF6-201ENST00000266079 A0A087X002 238 aa7.35□□□□□ -1.23
PRPF6-201ENST00000266079 NOTCH2NLQ7Z3S9 236 aa7.35□□□□□ -1.23
PRPF6-201ENST00000266079 PLA2G1BP04054 148 aaKnown RBP7.35□□□□□ -1.23
PRPF6-201ENST00000266079 ACYP2P14621 99 aa7.35□□□□□ -1.23
PRPF6-201ENST00000266079 ZNF706Q9Y5V0 76 aaPredicted RBP7.33□□□□□ -1.24
PRPF6-201ENST00000266079 ADM2Q7Z4H4 148 aa7.33□□□□□ -1.24
PRPF6-201ENST00000266079 Q5W150 140 aa7.33□□□□□ -1.24
PRPF6-201ENST00000266079 KRTAP13-3Q3SY46 172 aa7.32□□□□□ -1.24
PRPF6-201ENST00000266079 LINC00483Q53H64 154 aa7.32□□□□□ -1.24
PRPF6-201ENST00000266079 C4orf48Q5BLP8 95 aa7.31□□□□□ -1.24
PRPF6-201ENST00000266079 SPINK6Q6UWN8 80 aa7.31□□□□□ -1.24
PRPF6-201ENST00000266079 ABCA13Q86UQ4 5058 aa7.31□□□□□ -1.24
PRPF6-201ENST00000266079 KRTAP1-4P0C5Y4 121 aa7.3□□□□□ -1.24
PRPF6-201ENST00000266079 KRTAP4-5Q9BYR2 181 aa7.3□□□□□ -1.24
PRPF6-201ENST00000266079 Q8N1X5 172 aa7.3□□□□□ -1.24
PRPF6-201ENST00000266079 LINC01554Q52M75 96 aa7.29□□□□□ -1.24
PRPF6-201ENST00000266079 DMBT1Q9UGM3 2413 aaPredicted RBP7.29□□□□□ -1.24
PRPF6-201ENST00000266079 SPATA8Q6RVD6 105 aa7.28□□□□□ -1.24
PRPF6-201ENST00000266079 A0A1B0GU69 56 aa7.27□□□□□ -1.25
PRPF6-201ENST00000266079 KRTAP13-2Q52LG2 175 aa7.27□□□□□ -1.25
PRPF6-201ENST00000266079 DMAC1Q96GE9 116 aa7.27□□□□□ -1.25
PRPF6-201ENST00000266079 HERC2O95714 4834 aa7.26□□□□□ -1.25
PRPF6-201ENST00000266079 PKHD1L1Q86WI1 4243 aa7.24□□□□□ -1.25
PRPF6-201ENST00000266079 TYMSOSQ8TAI1 123 aa7.22□□□□□ -1.25
PRPF6-201ENST00000266079 MIR22HGQ0VDD5 57 aa7.21□□□□□ -1.25
PRPF6-201ENST00000266079 UQCR11O14957 56 aa7.2□□□□□ -1.26
PRPF6-201ENST00000266079 FAT3Q8TDW7 4589 aa7.19□□□□□ -1.26
PRPF6-201ENST00000266079 PCLOQ9Y6V0 5065 aa7.16□□□□□ -1.26
PRPF6-201ENST00000266079 SSBP3-AS1Q7Z2R9 100 aa7.14□□□□□ -1.27
PRPF6-201ENST00000266079 IGKV2-30P06310 120 aa7.14□□□□□ -1.27
PRPF6-201ENST00000266079 TNXBP22105 4242 aa7.13□□□□□ -1.27
PRPF6-201ENST00000266079 H3BS24 57 aa7.12□□□□□ -1.27
PRPF6-201ENST00000266079 CSAG1Q6PB30 78 aa7.12□□□□□ -1.27
PRPF6-201ENST00000266079 LINC00304Q8N9R0 145 aa7.11□□□□□ -1.27
PRPF6-201ENST00000266079 RETNLBQ9BQ08 111 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms