RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 SSBP3-AS1Q7Z2R9 100 aa9.9□□□□□ -0.83
CHKA-201ENST00000265689 hDV103S1A0JD37 113 aa9.88□□□□□ -0.83
CHKA-201ENST00000265689 KRTAP13-2Q52LG2 175 aa9.88□□□□□ -0.83
CHKA-201ENST00000265689 ZCCHC13Q8WW36 166 aaKnown RBP9.88□□□□□ -0.83
CHKA-201ENST00000265689 IGHV6-1A0A0B4J1U7 121 aa9.88□□□□□ -0.83
CHKA-201ENST00000265689 C8orf17Q9NRJ1 99 aa9.87□□□□□ -0.83
CHKA-201ENST00000265689 A0A1B0GVX0 72 aa9.86□□□□□ -0.83
CHKA-201ENST00000265689 CDK2AP2O75956 126 aa9.86□□□□□ -0.83
CHKA-201ENST00000265689 CD164Q04900 197 aa9.86□□□□□ -0.83
CHKA-201ENST00000265689 PRR4Q16378 134 aa9.86□□□□□ -0.83
CHKA-201ENST00000265689 SPINK6Q6UWN8 80 aa9.86□□□□□ -0.83
CHKA-201ENST00000265689 KIAA1109Q2LD37 5005 aa9.85□□□□□ -0.83
CHKA-201ENST00000265689 KRTAP1-4P0C5Y4 121 aa9.84□□□□□ -0.83
CHKA-201ENST00000265689 PRO0628Q9UI54 55 aa9.84□□□□□ -0.83
CHKA-201ENST00000265689 ASB16-AS1Q495Z4 193 aa9.83□□□□□ -0.84
CHKA-201ENST00000265689 MP68P56378 58 aa9.83□□□□□ -0.84
CHKA-201ENST00000265689 NOTCH2NLQ7Z3S9 236 aa9.83□□□□□ -0.84
CHKA-201ENST00000265689 C1orf64Q8NEQ6 169 aa9.83□□□□□ -0.84
CHKA-201ENST00000265689 HSPG2P98160 4391 aa9.83□□□□□ -0.84
CHKA-201ENST00000265689 H0Y9P7 68 aa9.81□□□□□ -0.84
CHKA-201ENST00000265689 LINC00208Q96KT6 92 aa9.81□□□□□ -0.84
CHKA-201ENST00000265689 BRK1Q8WUW1 75 aa9.8□□□□□ -0.84
CHKA-201ENST00000265689 PLA2G1BP04054 148 aaKnown RBP9.76□□□□□ -0.85
CHKA-201ENST00000265689 RYR1P21817 5038 aa9.74□□□□□ -0.85
CHKA-201ENST00000265689 TRAV22A0A0B4J277 110 aa9.74□□□□□ -0.85
CHKA-201ENST00000265689 NDUFS5O43920 106 aa9.74□□□□□ -0.85
CHKA-201ENST00000265689 MRPL34Q9BQ48 92 aaKnown RBP9.74□□□□□ -0.85
CHKA-201ENST00000265689 LRP1Q07954 4544 aaKnown RBP9.73□□□□□ -0.85
CHKA-201ENST00000265689 H3BPC8 53 aa9.72□□□□□ -0.85
CHKA-201ENST00000265689 TP53AIP1Q9HCN2 124 aa9.72□□□□□ -0.85
CHKA-201ENST00000265689 KRTAP17-1Q9BYP8 105 aa9.71□□□□□ -0.85
CHKA-201ENST00000265689 C1orf195Q5TG92 126 aa9.71□□□□□ -0.86
CHKA-201ENST00000265689 CYP4F30PQ9H0H9 118 aa9.7□□□□□ -0.86
CHKA-201ENST00000265689 TYMSOSQ8TAI1 123 aa9.69□□□□□ -0.86
CHKA-201ENST00000265689 PKHD1L1Q86WI1 4243 aa9.67□□□□□ -0.86
CHKA-201ENST00000265689 MYCBP2O75592 4640 aa9.67□□□□□ -0.86
CHKA-201ENST00000265689 PSPHP1O15172 72 aa9.65□□□□□ -0.86
CHKA-201ENST00000265689 Q1T7F1 81 aa9.65□□□□□ -0.86
CHKA-201ENST00000265689 PRR26Q8N8Z3 221 aa9.64□□□□□ -0.87
CHKA-201ENST00000265689 C4orf48Q5BLP8 95 aa9.63□□□□□ -0.87
CHKA-201ENST00000265689 LIMD2Q9BT23 127 aa9.63□□□□□ -0.87
CHKA-201ENST00000265689 FLG2Q5D862 2391 aaPredicted RBP9.63□□□□□ -0.87
CHKA-201ENST00000265689 C8orf87E5RJ46 101 aa9.63□□□□□ -0.87
CHKA-201ENST00000265689 KRTAP10-4P60372 401 aaPredicted RBP9.63□□□□□ -0.87
CHKA-201ENST00000265689 LINC00313P59037 77 aa9.61□□□□□ -0.87
CHKA-201ENST00000265689 PCOTHQ58A44 107 aa9.59□□□□□ -0.87
CHKA-201ENST00000265689 Q5W150 140 aa9.59□□□□□ -0.87
CHKA-201ENST00000265689 SPINK1P00995 79 aa9.58□□□□□ -0.88
CHKA-201ENST00000265689 SPANXA2-OT1Q8N9U9 137 aa9.57□□□□□ -0.88
CHKA-201ENST00000265689 A8MUN3 132 aa9.55□□□□□ -0.88
CHKA-201ENST00000265689 LINC00304Q8N9R0 145 aa9.55□□□□□ -0.88
CHKA-201ENST00000265689 KRTAP13-3Q3SY46 172 aa9.54□□□□□ -0.88
CHKA-201ENST00000265689 KRTAP16-1A8MUX0 517 aa9.51□□□□□ -0.89
CHKA-201ENST00000265689 Q8N9P0 234 aaPredicted RBP9.51□□□□□ -0.89
CHKA-201ENST00000265689 IGLV7-46A0A075B6I9 117 aa9.49□□□□□ -0.89
CHKA-201ENST00000265689 Q5VSD8 79 aa9.49□□□□□ -0.89
CHKA-201ENST00000265689 RETNLBQ9BQ08 111 aa9.49□□□□□ -0.89
CHKA-201ENST00000265689 SPAG11AQ6PDA7 123 aa9.48□□□□□ -0.89
CHKA-201ENST00000265689 TNXBP22105 4242 aa9.47□□□□□ -0.89
CHKA-201ENST00000265689 LOC101927531A0A1B0GV80 90 aa9.47□□□□□ -0.89
CHKA-201ENST00000265689 A8MU10 97 aa9.47□□□□□ -0.89
CHKA-201ENST00000265689 Q5VV11 94 aa9.46□□□□□ -0.89
CHKA-201ENST00000265689 RPS29P62273 56 aaKnown RBP9.46□□□□□ -0.9
CHKA-201ENST00000265689 V9GYY9 64 aa9.45□□□□□ -0.9
CHKA-201ENST00000265689 COA5Q86WW8 74 aa9.44□□□□□ -0.9
CHKA-201ENST00000265689 FAT3Q8TDW7 4589 aa9.44□□□□□ -0.9
CHKA-201ENST00000265689 FAM229AH3BQW9 127 aa9.44□□□□□ -0.9
CHKA-201ENST00000265689 PRR15LQ9BU68 103 aa9.41□□□□□ -0.9
CHKA-201ENST00000265689 ABCA13Q86UQ4 5058 aa9.41□□□□□ -0.9
CHKA-201ENST00000265689 CHKB-CPT1BH3BT56 60 aa9.39□□□□□ -0.91
CHKA-201ENST00000265689 KRTAP4-5Q9BYR2 181 aa9.39□□□□□ -0.91
CHKA-201ENST00000265689 DMBT1Q9UGM3 2413 aaPredicted RBP9.38□□□□□ -0.91
CHKA-201ENST00000265689 IGKV2-30P06310 120 aa9.35□□□□□ -0.91
CHKA-201ENST00000265689 HRES1P13985 223 aa9.32□□□□□ -0.92
CHKA-201ENST00000265689 C9orf92A6NGG3 77 aa9.3□□□□□ -0.92
CHKA-201ENST00000265689 BIRC6Q9NR09 4857 aa9.29□□□□□ -0.92
CHKA-201ENST00000265689 IGKV2D-30A0A075B6S6 120 aa9.29□□□□□ -0.92
CHKA-201ENST00000265689 Q8N1X5 172 aa9.28□□□□□ -0.92
CHKA-201ENST00000265689 Q75L30 129 aa9.26□□□□□ -0.93
CHKA-201ENST00000265689 HERC2O95714 4834 aa9.26□□□□□ -0.93
CHKA-201ENST00000265689 A6NED7 52 aa9.26□□□□□ -0.93
CHKA-201ENST00000265689 PMAIP1Q13794 54 aa9.26□□□□□ -0.93
CHKA-201ENST00000265689 LCA10Q71F78 164 aa9.26□□□□□ -0.93
CHKA-201ENST00000265689 SPTSSBQ8NFR3 76 aa9.22□□□□□ -0.93
CHKA-201ENST00000265689 KRTAP10-8P60410 259 aa9.22□□□□□ -0.93
CHKA-201ENST00000265689 LINC01558Q9Y6Z2 57 aa9.21□□□□□ -0.94
CHKA-201ENST00000265689 DMAC1Q96GE9 116 aa9.2□□□□□ -0.94
CHKA-201ENST00000265689 ACYP2P14621 99 aa9.19□□□□□ -0.94
CHKA-201ENST00000265689 A8MUU9 505 aa9.18□□□□□ -0.94
CHKA-201ENST00000265689 C20orf166-AS1Q96NR2 134 aa9.18□□□□□ -0.94
CHKA-201ENST00000265689 PCLOQ9Y6V0 5065 aa9.18□□□□□ -0.94
CHKA-201ENST00000265689 SPINK7P58062 85 aa9.14□□□□□ -0.95
CHKA-201ENST00000265689 MT1HL1P0DM35 61 aa9.13□□□□□ -0.95
CHKA-201ENST00000265689 C7orf65Q6ZTY9 151 aa9.13□□□□□ -0.95
CHKA-201ENST00000265689 LPAP08519 4548 aa9.12□□□□□ -0.95
CHKA-201ENST00000265689 CDC42SE1Q9NRR8 79 aa9.11□□□□□ -0.95
CHKA-201ENST00000265689 ATP11AUNQ6ZP68 121 aa9.1□□□□□ -0.95
CHKA-201ENST00000265689 SEC61GP60059 68 aa9.09□□□□□ -0.95
CHKA-201ENST00000265689 A6NN06 94 aa9.03□□□□□ -0.96
CHKA-201ENST00000265689 HERC1Q15751 4861 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms