RNA–Protein interactions for RNA: ENST00000262643.7

CCNE1-201, Transcript of cyclin E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNE1, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-201ENST00000262643 IGKV4-1P06312 121 aa12.1□□□□□ -0.47
CCNE1-201ENST00000262643 IGLV7-46A0A075B6I9 117 aa12.09□□□□□ -0.47
CCNE1-201ENST00000262643 DSCR10P59022 87 aa12.08□□□□□ -0.48
CCNE1-201ENST00000262643 LINC00472Q9H8W2 130 aa12.08□□□□□ -0.48
CCNE1-201ENST00000262643 ATOX1O00244 68 aa12.05□□□□□ -0.48
CCNE1-201ENST00000262643 CD164Q04900 197 aa12.04□□□□□ -0.48
CCNE1-201ENST00000262643 K7EQZ3 153 aa12.03□□□□□ -0.48
CCNE1-201ENST00000262643 SS18L2Q9UHA2 77 aa12.03□□□□□ -0.48
CCNE1-201ENST00000262643 Q96NJ1 140 aa12.02□□□□□ -0.49
CCNE1-201ENST00000262643 RPS29P62273 56 aaKnown RBP12.01□□□□□ -0.49
CCNE1-201ENST00000262643 TPRXLQ17RH7 258 aa12.01□□□□□ -0.49
CCNE1-201ENST00000262643 FP248Q71RG6 208 aaPredicted RBP11.99□□□□□ -0.49
CCNE1-201ENST00000262643 J3KT08 172 aa11.94□□□□□ -0.5
CCNE1-201ENST00000262643 A8MWP4 228 aa11.93□□□□□ -0.5
CCNE1-201ENST00000262643 CCDC179H3BU77 68 aa11.91□□□□□ -0.5
CCNE1-201ENST00000262643 MUC2Q02817 5179 aa11.91□□□□□ -0.5
CCNE1-201ENST00000262643 PRR15Q8IV56 129 aa11.9□□□□□ -0.5
CCNE1-201ENST00000262643 SERP2Q8N6R1 65 aa11.9□□□□□ -0.5
CCNE1-201ENST00000262643 COX7CP15954 63 aa11.88□□□□□ -0.51
CCNE1-201ENST00000262643 KRTAP13-3Q3SY46 172 aa11.88□□□□□ -0.51
CCNE1-201ENST00000262643 LIMD2Q9BT23 127 aa11.88□□□□□ -0.51
CCNE1-201ENST00000262643 HCG22E2RYF7 251 aa11.87□□□□□ -0.51
CCNE1-201ENST00000262643 ASB16-AS1Q495Z4 193 aa11.87□□□□□ -0.51
CCNE1-201ENST00000262643 Q5XG85 94 aa11.87□□□□□ -0.51
CCNE1-201ENST00000262643 MUC17Q685J3 4493 aa11.86□□□□□ -0.51
CCNE1-201ENST00000262643 NDUFB1O75438 58 aa11.86□□□□□ -0.51
CCNE1-201ENST00000262643 UQCRQO14949 82 aa11.85□□□□□ -0.51
CCNE1-201ENST00000262643 SMIM20Q8N5G0 67 aa11.84□□□□□ -0.51
CCNE1-201ENST00000262643 C1orf195Q5TG92 126 aa11.83□□□□□ -0.52
CCNE1-201ENST00000262643 WFDC13Q8IUB5 93 aa11.83□□□□□ -0.52
CCNE1-201ENST00000262643 TRAV7A0A075B6U4 112 aa11.82□□□□□ -0.52
CCNE1-201ENST00000262643 IGHV6-1A0A0B4J1U7 121 aa11.79□□□□□ -0.52
CCNE1-201ENST00000262643 A0A1B0GVX0 72 aa11.78□□□□□ -0.52
CCNE1-201ENST00000262643 OCR1Q9BZK8 76 aa11.77□□□□□ -0.52
CCNE1-201ENST00000262643 CASC2Q6XLA1 102 aa11.77□□□□□ -0.53
CCNE1-201ENST00000262643 MMP24-AS1A0A0U1RRL7 71 aa11.76□□□□□ -0.53
CCNE1-201ENST00000262643 NOTCH2NLQ7Z3S9 236 aa11.75□□□□□ -0.53
CCNE1-201ENST00000262643 C8orf17Q9NRJ1 99 aa11.73□□□□□ -0.53
CCNE1-201ENST00000262643 hDV103S1A0JD37 113 aa11.7□□□□□ -0.54
CCNE1-201ENST00000262643 C20orf197Q8N268 126 aa11.69□□□□□ -0.54
CCNE1-201ENST00000262643 XP32Q5T750 250 aa11.68□□□□□ -0.54
CCNE1-201ENST00000262643 C9orf92A6NGG3 77 aa11.67□□□□□ -0.54
CCNE1-201ENST00000262643 A0A0U1RQV1 116 aa11.64□□□□□ -0.55
CCNE1-201ENST00000262643 CYSTM1Q9H1C7 97 aa11.64□□□□□ -0.55
CCNE1-201ENST00000262643 SEC61BP60468 96 aaKnown RBP11.64□□□□□ -0.55
CCNE1-201ENST00000262643 LINC00313P59037 77 aa11.6□□□□□ -0.55
CCNE1-201ENST00000262643 FAT4Q6V0I7 4981 aa11.6□□□□□ -0.55
CCNE1-201ENST00000262643 TMEM254Q8TBM7 123 aa11.6□□□□□ -0.55
CCNE1-201ENST00000262643 SNURFQ9Y675 71 aa11.6□□□□□ -0.55
CCNE1-201ENST00000262643 C8orf87E5RJ46 101 aa11.59□□□□□ -0.55
CCNE1-201ENST00000262643 MRPL34Q9BQ48 92 aaKnown RBP11.59□□□□□ -0.55
CCNE1-201ENST00000262643 KLKP1Q107X0 134 aa11.57□□□□□ -0.56
CCNE1-201ENST00000262643 C5orf47Q569G3 176 aa11.55□□□□□ -0.56
CCNE1-201ENST00000262643 NDUFS5O43920 106 aa11.54□□□□□ -0.56
CCNE1-201ENST00000262643 KRTAP4-1Q9BYQ7 146 aa11.53□□□□□ -0.56
CCNE1-201ENST00000262643 TP53AIP1Q9HCN2 124 aa11.5□□□□□ -0.57
CCNE1-201ENST00000262643 KRTAP16-1A8MUX0 517 aa11.48□□□□□ -0.57
CCNE1-201ENST00000262643 PCOTHQ58A44 107 aa11.48□□□□□ -0.57
CCNE1-201ENST00000262643 MP68P56378 58 aa11.47□□□□□ -0.57
CCNE1-201ENST00000262643 H0Y9P7 68 aa11.47□□□□□ -0.57
CCNE1-201ENST00000262643 H7BZZ5 65 aa11.45□□□□□ -0.58
CCNE1-201ENST00000262643 TRAV22A0A0B4J277 110 aa11.45□□□□□ -0.58
CCNE1-201ENST00000262643 Q8N9P0 234 aaPredicted RBP11.43□□□□□ -0.58
CCNE1-201ENST00000262643 NDUFC1O43677 76 aa11.42□□□□□ -0.58
CCNE1-201ENST00000262643 ZCCHC13Q8WW36 166 aaKnown RBP11.42□□□□□ -0.58
CCNE1-201ENST00000262643 LINC00208Q96KT6 92 aa11.42□□□□□ -0.58
CCNE1-201ENST00000262643 TMEM258P61165 79 aa11.42□□□□□ -0.58
CCNE1-201ENST00000262643 RPL37P61927 97 aaKnown RBP11.39□□□□□ -0.59
CCNE1-201ENST00000262643 LCE2AQ5TA79 106 aaPredicted RBP11.39□□□□□ -0.59
CCNE1-201ENST00000262643 Q5W150 140 aa11.38□□□□□ -0.59
CCNE1-201ENST00000262643 H3BPC8 53 aa11.37□□□□□ -0.59
CCNE1-201ENST00000262643 C1orf64Q8NEQ6 169 aa11.36□□□□□ -0.59
CCNE1-201ENST00000262643 FAM236DA0A1B0GTK5 79 aa11.3□□□□□ -0.6
CCNE1-201ENST00000262643 FAM236CP0DP71 79 aa11.3□□□□□ -0.6
CCNE1-201ENST00000262643 Q75L30 129 aa11.24□□□□□ -0.61
CCNE1-201ENST00000262643 C20orf166-AS1Q96NR2 134 aa11.23□□□□□ -0.61
CCNE1-201ENST00000262643 A8MUU9 505 aa11.22□□□□□ -0.61
CCNE1-201ENST00000262643 ATP11AUNQ6ZP68 121 aa11.21□□□□□ -0.61
CCNE1-201ENST00000262643 LOC101927531A0A1B0GV80 90 aa11.19□□□□□ -0.62
CCNE1-201ENST00000262643 ATP5EP56381 51 aaPredicted RBP11.19□□□□□ -0.62
CCNE1-201ENST00000262643 KRTAP19-2Q3LHN2 52 aa11.18□□□□□ -0.62
CCNE1-201ENST00000262643 LCE2CQ5TA81 110 aa11.18□□□□□ -0.62
CCNE1-201ENST00000262643 CYP4F30PQ9H0H9 118 aa11.13□□□□□ -0.63
CCNE1-201ENST00000262643 IGKV2-30P06310 120 aa11.1□□□□□ -0.63
CCNE1-201ENST00000262643 SPANXA2-OT1Q8N9U9 137 aa11.09□□□□□ -0.63
CCNE1-201ENST00000262643 IGKV2D-30A0A075B6S6 120 aa11.08□□□□□ -0.64
CCNE1-201ENST00000262643 RPS28P62857 69 aaKnown RBP11.06□□□□□ -0.64
CCNE1-201ENST00000262643 SERP1Q9Y6X1 66 aa11.06□□□□□ -0.64
CCNE1-201ENST00000262643 COX6B2Q6YFQ2 88 aa11.05□□□□□ -0.64
CCNE1-201ENST00000262643 MT1HP80294 61 aa11.04□□□□□ -0.64
CCNE1-201ENST00000262643 KRTAP9-2Q9BYQ4 174 aa10.99□□□□□ -0.65
CCNE1-201ENST00000262643 HRES1P13985 223 aa10.97□□□□□ -0.65
CCNE1-201ENST00000262643 C7orf65Q6ZTY9 151 aa10.96□□□□□ -0.66
CCNE1-201ENST00000262643 SPINK7P58062 85 aa10.91□□□□□ -0.66
CCNE1-201ENST00000262643 M0R2T5 61 aa10.91□□□□□ -0.66
CCNE1-201ENST00000262643 FLGP20930 4061 aaPredicted RBP10.9□□□□□ -0.66
CCNE1-201ENST00000262643 COA5Q86WW8 74 aa10.81□□□□□ -0.68
CCNE1-201ENST00000262643 C4orf26Q17RF5 130 aa10.8□□□□□ -0.68
CCNE1-201ENST00000262643 DMAC1Q96GE9 116 aa10.8□□□□□ -0.68
CCNE1-201ENST00000262643 KRTAP10-6P60371 365 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms