RNA–Protein interactions for RNA: ENST00000262613.9

SLC9A3R1-201, Transcript of SLC9A3 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC9A3R1, Length 1,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-201ENST00000262613 SRRM2Q9UQ35 2752 aaKnown RBP12.59□□□□□ -0.39
SLC9A3R1-201ENST00000262613 APOBP04114 4563 aaKnown RBP12.57□□□□□ -0.4
SLC9A3R1-201ENST00000262613 MMP24-AS1A0A0U1RRL7 71 aa12.55□□□□□ -0.4
SLC9A3R1-201ENST00000262613 ZNF706Q9Y5V0 76 aaPredicted RBP12.55□□□□□ -0.4
SLC9A3R1-201ENST00000262613 V9GYY9 64 aa12.55□□□□□ -0.4
SLC9A3R1-201ENST00000262613 LINC00483Q53H64 154 aa12.53□□□□□ -0.4
SLC9A3R1-201ENST00000262613 C1orf195Q5TG92 126 aa12.52□□□□□ -0.4
SLC9A3R1-201ENST00000262613 VPS13BQ7Z7G8 4022 aa12.51□□□□□ -0.41
SLC9A3R1-201ENST00000262613 PSPHP1O15172 72 aa12.5□□□□□ -0.41
SLC9A3R1-201ENST00000262613 ASB16-AS1Q495Z4 193 aa12.47□□□□□ -0.41
SLC9A3R1-201ENST00000262613 Q96NJ1 140 aa12.46□□□□□ -0.41
SLC9A3R1-201ENST00000262613 IGLV9-49A0A0B4J1Y8 123 aa12.44□□□□□ -0.42
SLC9A3R1-201ENST00000262613 SMR3BP02814 79 aaPredicted RBP12.44□□□□□ -0.42
SLC9A3R1-201ENST00000262613 A8MUN3 132 aa12.43□□□□□ -0.42
SLC9A3R1-201ENST00000262613 MOBPQ13875 183 aa12.42□□□□□ -0.42
SLC9A3R1-201ENST00000262613 Q5VV11 94 aa12.41□□□□□ -0.42
SLC9A3R1-201ENST00000262613 Q8N9P0 234 aaPredicted RBP12.41□□□□□ -0.42
SLC9A3R1-201ENST00000262613 IGLV7-46A0A075B6I9 117 aa12.39□□□□□ -0.43
SLC9A3R1-201ENST00000262613 TP53AIP1Q9HCN2 124 aa12.39□□□□□ -0.43
SLC9A3R1-201ENST00000262613 ANAPC11Q9NYG5 84 aa12.39□□□□□ -0.43
SLC9A3R1-201ENST00000262613 LIMD2Q9BT23 127 aa12.38□□□□□ -0.43
SLC9A3R1-201ENST00000262613 C8orf17Q9NRJ1 99 aa12.36□□□□□ -0.43
SLC9A3R1-201ENST00000262613 FAT1Q14517 4588 aa12.35□□□□□ -0.43
SLC9A3R1-201ENST00000262613 KRTAP10-4P60372 401 aaPredicted RBP12.34□□□□□ -0.43
SLC9A3R1-201ENST00000262613 CDK2AP2O75956 126 aa12.33□□□□□ -0.44
SLC9A3R1-201ENST00000262613 COA5Q86WW8 74 aa12.33□□□□□ -0.44
SLC9A3R1-201ENST00000262613 SPINK6Q6UWN8 80 aa12.3□□□□□ -0.44
SLC9A3R1-201ENST00000262613 A0A1B0GVX0 72 aa12.3□□□□□ -0.44
SLC9A3R1-201ENST00000262613 HSPG2P98160 4391 aa12.29□□□□□ -0.44
SLC9A3R1-201ENST00000262613 CD164Q04900 197 aa12.29□□□□□ -0.44
SLC9A3R1-201ENST00000262613 KRTAP1-4P0C5Y4 121 aa12.28□□□□□ -0.44
SLC9A3R1-201ENST00000262613 PRR15LQ9BU68 103 aa12.27□□□□□ -0.44
SLC9A3R1-201ENST00000262613 EPPK1P58107 5090 aaKnown RBP12.26□□□□□ -0.45
SLC9A3R1-201ENST00000262613 LOC101927531A0A1B0GV80 90 aa12.26□□□□□ -0.45
SLC9A3R1-201ENST00000262613 RYR1P21817 5038 aa12.26□□□□□ -0.45
SLC9A3R1-201ENST00000262613 PCOTHQ58A44 107 aa12.25□□□□□ -0.45
SLC9A3R1-201ENST00000262613 Q75L30 129 aa12.24□□□□□ -0.45
SLC9A3R1-201ENST00000262613 A0A087X002 238 aa12.23□□□□□ -0.45
SLC9A3R1-201ENST00000262613 CHKB-CPT1BH3BT56 60 aa12.23□□□□□ -0.45
SLC9A3R1-201ENST00000262613 IGHV6-1A0A0B4J1U7 121 aa12.22□□□□□ -0.45
SLC9A3R1-201ENST00000262613 MRPL34Q9BQ48 92 aaKnown RBP12.22□□□□□ -0.45
SLC9A3R1-201ENST00000262613 PMAIP1Q13794 54 aa12.21□□□□□ -0.45
SLC9A3R1-201ENST00000262613 PKHD1L1Q86WI1 4243 aa12.2□□□□□ -0.46
SLC9A3R1-201ENST00000262613 FAM229AH3BQW9 127 aa12.2□□□□□ -0.46
SLC9A3R1-201ENST00000262613 KRTAP13-2Q52LG2 175 aa12.2□□□□□ -0.46
SLC9A3R1-201ENST00000262613 SSBP3-AS1Q7Z2R9 100 aa12.2□□□□□ -0.46
SLC9A3R1-201ENST00000262613 A8MU10 97 aa12.19□□□□□ -0.46
SLC9A3R1-201ENST00000262613 PLA2G1BP04054 148 aaKnown RBP12.19□□□□□ -0.46
SLC9A3R1-201ENST00000262613 NDUFS5O43920 106 aa12.17□□□□□ -0.46
SLC9A3R1-201ENST00000262613 Q5VSD8 79 aa12.16□□□□□ -0.46
SLC9A3R1-201ENST00000262613 LINC01558Q9Y6Z2 57 aa12.15□□□□□ -0.46
SLC9A3R1-201ENST00000262613 KIAA1109Q2LD37 5005 aa12.14□□□□□ -0.47
SLC9A3R1-201ENST00000262613 NOTCH2NLQ7Z3S9 236 aa12.12□□□□□ -0.47
SLC9A3R1-201ENST00000262613 KRTAP17-1Q9BYP8 105 aa12.12□□□□□ -0.47
SLC9A3R1-201ENST00000262613 HRES1P13985 223 aa12.1□□□□□ -0.47
SLC9A3R1-201ENST00000262613 LCA10Q71F78 164 aa12.09□□□□□ -0.47
SLC9A3R1-201ENST00000262613 KRTAP13-3Q3SY46 172 aa12.07□□□□□ -0.48
SLC9A3R1-201ENST00000262613 A6NED7 52 aa12.07□□□□□ -0.48
SLC9A3R1-201ENST00000262613 PRR26Q8N8Z3 221 aa12.06□□□□□ -0.48
SLC9A3R1-201ENST00000262613 TYMSOSQ8TAI1 123 aa12.05□□□□□ -0.48
SLC9A3R1-201ENST00000262613 SEC61GP60059 68 aa12.04□□□□□ -0.48
SLC9A3R1-201ENST00000262613 SPAG11AQ6PDA7 123 aa12.04□□□□□ -0.48
SLC9A3R1-201ENST00000262613 ATP11AUNQ6ZP68 121 aa12.04□□□□□ -0.48
SLC9A3R1-201ENST00000262613 Q8N1X5 172 aa12.04□□□□□ -0.48
SLC9A3R1-201ENST00000262613 CDC42SE1Q9NRR8 79 aa12.03□□□□□ -0.48
SLC9A3R1-201ENST00000262613 Q5W150 140 aa12□□□□□ -0.49
SLC9A3R1-201ENST00000262613 C8orf87E5RJ46 101 aa11.97□□□□□ -0.49
SLC9A3R1-201ENST00000262613 SPTSSBQ8NFR3 76 aa11.95□□□□□ -0.5
SLC9A3R1-201ENST00000262613 A6NN06 94 aa11.92□□□□□ -0.5
SLC9A3R1-201ENST00000262613 KTN1-AS1Q86SY8 53 aa11.92□□□□□ -0.5
SLC9A3R1-201ENST00000262613 LINC00304Q8N9R0 145 aa11.92□□□□□ -0.5
SLC9A3R1-201ENST00000262613 C4orf48Q5BLP8 95 aa11.91□□□□□ -0.5
SLC9A3R1-201ENST00000262613 SPINK1P00995 79 aa11.89□□□□□ -0.51
SLC9A3R1-201ENST00000262613 SPINK7P58062 85 aa11.88□□□□□ -0.51
SLC9A3R1-201ENST00000262613 LRP1Q07954 4544 aaKnown RBP11.87□□□□□ -0.51
SLC9A3R1-201ENST00000262613 FAT3Q8TDW7 4589 aa11.87□□□□□ -0.51
SLC9A3R1-201ENST00000262613 ACYP2P14621 99 aa11.86□□□□□ -0.51
SLC9A3R1-201ENST00000262613 BIRC6Q9NR09 4857 aa11.86□□□□□ -0.51
SLC9A3R1-201ENST00000262613 DMAC1Q96GE9 116 aa11.84□□□□□ -0.51
SLC9A3R1-201ENST00000262613 TNXBP22105 4242 aa11.84□□□□□ -0.51
SLC9A3R1-201ENST00000262613 RPS29P62273 56 aaKnown RBP11.83□□□□□ -0.52
SLC9A3R1-201ENST00000262613 KRTAP10-8P60410 259 aa11.83□□□□□ -0.52
SLC9A3R1-201ENST00000262613 LINC00313P59037 77 aa11.79□□□□□ -0.52
SLC9A3R1-201ENST00000262613 KRTAP4-5Q9BYR2 181 aa11.79□□□□□ -0.52
SLC9A3R1-201ENST00000262613 FLG2Q5D862 2391 aaPredicted RBP11.79□□□□□ -0.52
SLC9A3R1-201ENST00000262613 IGKV2-30P06310 120 aa11.76□□□□□ -0.53
SLC9A3R1-201ENST00000262613 MYCBP2O75592 4640 aa11.73□□□□□ -0.53
SLC9A3R1-201ENST00000262613 HERC2O95714 4834 aa11.71□□□□□ -0.53
SLC9A3R1-201ENST00000262613 KRTAP16-1A8MUX0 517 aa11.71□□□□□ -0.53
SLC9A3R1-201ENST00000262613 MT1HL1P0DM35 61 aa11.7□□□□□ -0.54
SLC9A3R1-201ENST00000262613 C7orf65Q6ZTY9 151 aa11.7□□□□□ -0.54
SLC9A3R1-201ENST00000262613 RBM12B-AS1Q9P1G2 102 aa11.65□□□□□ -0.54
SLC9A3R1-201ENST00000262613 RETNLBQ9BQ08 111 aa11.64□□□□□ -0.55
SLC9A3R1-201ENST00000262613 ABCA13Q86UQ4 5058 aa11.6□□□□□ -0.55
SLC9A3R1-201ENST00000262613 A0A1B0GU69 56 aa11.59□□□□□ -0.55
SLC9A3R1-201ENST00000262613 DMBT1Q9UGM3 2413 aaPredicted RBP11.54□□□□□ -0.56
SLC9A3R1-201ENST00000262613 SPATA8Q6RVD6 105 aa11.53□□□□□ -0.56
SLC9A3R1-201ENST00000262613 IGKV2D-30A0A075B6S6 120 aa11.48□□□□□ -0.57
SLC9A3R1-201ENST00000262613 UQCR11O14957 56 aa11.42□□□□□ -0.58
SLC9A3R1-201ENST00000262613 MIR22HGQ0VDD5 57 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms