RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 KRTAP9-8Q9BYQ0 159 aa6.15□□□□□ -1.42
TRAF4-202ENST00000262396 KRTAP16-1A8MUX0 517 aa6.14□□□□□ -1.43
TRAF4-202ENST00000262396 RBM3P98179 157 aaKnown RBP6.14□□□□□ -1.43
TRAF4-202ENST00000262396 UBE2V1Q13404 147 aa6.14□□□□□ -1.43
TRAF4-202ENST00000262396 NOTCH2NLQ7Z3S9 236 aa6.14□□□□□ -1.43
TRAF4-202ENST00000262396 LINC00472Q9H8W2 130 aa6.14□□□□□ -1.43
TRAF4-202ENST00000262396 A0A1B0GVX0 72 aa6.13□□□□□ -1.43
TRAF4-202ENST00000262396 NDUFB1O75438 58 aa6.12□□□□□ -1.43
TRAF4-202ENST00000262396 KRTAP10-10P60014 251 aa6.12□□□□□ -1.43
TRAF4-202ENST00000262396 C21orf62-AS1Q17RA5 79 aa6.12□□□□□ -1.43
TRAF4-202ENST00000262396 J3KT08 172 aa6.11□□□□□ -1.43
TRAF4-202ENST00000262396 HRES1P13985 223 aa6.11□□□□□ -1.43
TRAF4-202ENST00000262396 ATXN8Q156A1 80 aa6.11□□□□□ -1.43
TRAF4-202ENST00000262396 USH2AO75445 5202 aa6.11□□□□□ -1.43
TRAF4-202ENST00000262396 C9JAW5 83 aa6.1□□□□□ -1.43
TRAF4-202ENST00000262396 NAA38Q9BRA0 125 aaKnown RBP6.1□□□□□ -1.43
TRAF4-202ENST00000262396 KRTAP9-7A8MTY7 169 aa6.09□□□□□ -1.43
TRAF4-202ENST00000262396 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.09□□□□□ -1.43
TRAF4-202ENST00000262396 MT2AP02795 61 aa6.09□□□□□ -1.43
TRAF4-202ENST00000262396 C9orf118A6NHY6 69 aa6.08□□□□□ -1.44
TRAF4-202ENST00000262396 ZCCHC13Q8WW36 166 aaKnown RBP6.08□□□□□ -1.44
TRAF4-202ENST00000262396 BAALC-AS2P0C853 105 aa6.07□□□□□ -1.44
TRAF4-202ENST00000262396 SPINK7P58062 85 aa6.06□□□□□ -1.44
TRAF4-202ENST00000262396 MPLKIPQ8TAP9 179 aa6.06□□□□□ -1.44
TRAF4-202ENST00000262396 LINC00846Q9NV44 126 aa6.06□□□□□ -1.44
TRAF4-202ENST00000262396 SSPOA2VEC9 5147 aa6.05□□□□□ -1.44
TRAF4-202ENST00000262396 A0A1W2PPM0 123 aa6.05□□□□□ -1.44
TRAF4-202ENST00000262396 TAX1BP3O14907 124 aa6.05□□□□□ -1.44
TRAF4-202ENST00000262396 MT1FP04733 61 aa6.03□□□□□ -1.44
TRAF4-202ENST00000262396 Q6ZQT0 140 aa6.02□□□□□ -1.45
TRAF4-202ENST00000262396 GTF2H5Q6ZYL4 71 aa6.01□□□□□ -1.45
TRAF4-202ENST00000262396 WFDC13Q8IUB5 93 aa6.01□□□□□ -1.45
TRAF4-202ENST00000262396 JMJD7-PLA2G4BH0Y9G9 81 aa6□□□□□ -1.45
TRAF4-202ENST00000262396 SPCS1Q9Y6A9 102 aa6□□□□□ -1.45
TRAF4-202ENST00000262396 KRTAP19-1Q8IUB9 90 aa5.99□□□□□ -1.45
TRAF4-202ENST00000262396 C8orf17Q9NRJ1 99 aa5.99□□□□□ -1.45
TRAF4-202ENST00000262396 A8MWP4 228 aa5.98□□□□□ -1.45
TRAF4-202ENST00000262396 H3BT86 120 aa5.98□□□□□ -1.45
TRAF4-202ENST00000262396 FCGBPQ9Y6R7 5405 aaPredicted RBP5.97□□□□□ -1.45
TRAF4-202ENST00000262396 A0A1B0GV90 55 aa5.97□□□□□ -1.45
TRAF4-202ENST00000262396 LCE2BO14633 110 aa5.97□□□□□ -1.45
TRAF4-202ENST00000262396 PDE6GP18545 87 aa5.97□□□□□ -1.45
TRAF4-202ENST00000262396 A0A1B0GW54 56 aa5.96□□□□□ -1.46
TRAF4-202ENST00000262396 NREPQ16612 68 aa5.96□□□□□ -1.46
TRAF4-202ENST00000262396 Q6ZVQ6 151 aa5.96□□□□□ -1.46
TRAF4-202ENST00000262396 Q8N9P0 234 aaPredicted RBP5.96□□□□□ -1.46
TRAF4-202ENST00000262396 KRTAP9-3Q9BYQ3 159 aa5.96□□□□□ -1.46
TRAF4-202ENST00000262396 NDUFS5O43920 106 aa5.95□□□□□ -1.46
TRAF4-202ENST00000262396 K7EP34 96 aa5.94□□□□□ -1.46
TRAF4-202ENST00000262396 LOC110117498A0A087WWA1 95 aa5.93□□□□□ -1.46
TRAF4-202ENST00000262396 IGKV3D-7A0A0C4DH55 119 aa5.93□□□□□ -1.46
TRAF4-202ENST00000262396 C14orf132Q9NPU4 83 aa5.93□□□□□ -1.46
TRAF4-202ENST00000262396 PRR15Q8IV56 129 aa5.9□□□□□ -1.46
TRAF4-202ENST00000262396 MRPL34Q9BQ48 92 aaKnown RBP5.9□□□□□ -1.46
TRAF4-202ENST00000262396 F8W1H4 67 aa5.89□□□□□ -1.47
TRAF4-202ENST00000262396 TMEM254Q8TBM7 123 aa5.88□□□□□ -1.47
TRAF4-202ENST00000262396 SYNE2Q8WXH0 6885 aaKnown RBP5.88□□□□□ -1.47
TRAF4-202ENST00000262396 IGKV2D-30A0A075B6S6 120 aa5.87□□□□□ -1.47
TRAF4-202ENST00000262396 hDV103S1A0JD37 113 aa5.87□□□□□ -1.47
TRAF4-202ENST00000262396 IGKV2-30P06310 120 aa5.87□□□□□ -1.47
TRAF4-202ENST00000262396 H1FX-AS1Q4G0G2 97 aa5.87□□□□□ -1.47
TRAF4-202ENST00000262396 MACF1Q9UPN3 7388 aaKnown RBP5.87□□□□□ -1.47
TRAF4-202ENST00000262396 MMP24-AS1A0A0U1RRL7 71 aa5.84□□□□□ -1.47
TRAF4-202ENST00000262396 PRO0461Q9UI25 63 aa5.84□□□□□ -1.47
TRAF4-202ENST00000262396 BPY2O14599 106 aa5.83□□□□□ -1.48
TRAF4-202ENST00000262396 K7EQZ3 153 aa5.82□□□□□ -1.48
TRAF4-202ENST00000262396 SMCPP49901 116 aaPredicted RBP5.82□□□□□ -1.48
TRAF4-202ENST00000262396 C7orf65Q6ZTY9 151 aa5.82□□□□□ -1.48
TRAF4-202ENST00000262396 KRTAP19-6Q3LI70 58 aa5.81□□□□□ -1.48
TRAF4-202ENST00000262396 J3QR89 54 aa5.77□□□□□ -1.49
TRAF4-202ENST00000262396 FAM236AA0A1B0GUQ0 79 aa5.76□□□□□ -1.49
TRAF4-202ENST00000262396 FAM236BA0A1B0GV22 79 aa5.76□□□□□ -1.49
TRAF4-202ENST00000262396 HCG22E2RYF7 251 aa5.76□□□□□ -1.49
TRAF4-202ENST00000262396 ETDBQ3ZM63 59 aa5.76□□□□□ -1.49
TRAF4-202ENST00000262396 CASC2Q6XLA1 102 aa5.76□□□□□ -1.49
TRAF4-202ENST00000262396 UBL5Q9BZL1 73 aa5.74□□□□□ -1.49
TRAF4-202ENST00000262396 C4orf26Q17RF5 130 aa5.73□□□□□ -1.49
TRAF4-202ENST00000262396 K7ERU9 68 aa5.72□□□□□ -1.49
TRAF4-202ENST00000262396 Q5W150 140 aa5.72□□□□□ -1.49
TRAF4-202ENST00000262396 Q8N9L7 120 aa5.72□□□□□ -1.49
TRAF4-202ENST00000262396 CXCL6P80162 114 aa5.71□□□□□ -1.5
TRAF4-202ENST00000262396 C5orf47Q569G3 176 aa5.71□□□□□ -1.5
TRAF4-202ENST00000262396 ACYP1P07311 99 aa5.67□□□□□ -1.5
TRAF4-202ENST00000262396 S4R3F8 94 aa5.66□□□□□ -1.5
TRAF4-202ENST00000262396 FAM240AA0A1B0GVK7 77 aa5.65□□□□□ -1.5
TRAF4-202ENST00000262396 KRTAP6-3Q3LI67 103 aa5.65□□□□□ -1.5
TRAF4-202ENST00000262396 CSAG1Q6PB30 78 aa5.64□□□□□ -1.51
TRAF4-202ENST00000262396 A6NN06 94 aa5.62□□□□□ -1.51
TRAF4-202ENST00000262396 C1orf64Q8NEQ6 169 aa5.62□□□□□ -1.51
TRAF4-202ENST00000262396 Q5VV11 94 aa5.6□□□□□ -1.51
TRAF4-202ENST00000262396 ATP5EP2Q5VTU8 51 aa5.59□□□□□ -1.51
TRAF4-202ENST00000262396 TP53AIP1Q9HCN2 124 aa5.56□□□□□ -1.52
TRAF4-202ENST00000262396 LCA10Q71F78 164 aa5.55□□□□□ -1.52
TRAF4-202ENST00000262396 IMUPQ9GZP8 106 aa5.55□□□□□ -1.52
TRAF4-202ENST00000262396 LINC00643Q86TS7 51 aa5.53□□□□□ -1.52
TRAF4-202ENST00000262396 KRTAP3-1Q9BYR8 98 aa5.51□□□□□ -1.53
TRAF4-202ENST00000262396 NEBP20929 6669 aa5.51□□□□□ -1.53
TRAF4-202ENST00000262396 HIST1H4AP62805 103 aaKnown RBP5.5□□□□□ -1.53
TRAF4-202ENST00000262396 KLKP1Q107X0 134 aa5.5□□□□□ -1.53
TRAF4-202ENST00000262396 MT1BP07438 61 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms