RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 KRTAP1-4P0C5Y4 121 aa7.75□□□□□ -1.17
SGCA-201ENST00000262018 MOBPQ13875 183 aa7.72□□□□□ -1.17
SGCA-201ENST00000262018 FAM229BQ4G0N7 80 aa7.71□□□□□ -1.17
SGCA-201ENST00000262018 A0A087WSZ3 146 aa7.7□□□□□ -1.18
SGCA-201ENST00000262018 J3KT08 172 aa7.7□□□□□ -1.18
SGCA-201ENST00000262018 IGKV4-1P06312 121 aa7.7□□□□□ -1.18
SGCA-201ENST00000262018 SS18L2Q9UHA2 77 aa7.69□□□□□ -1.18
SGCA-201ENST00000262018 MUC17Q685J3 4493 aa7.69□□□□□ -1.18
SGCA-201ENST00000262018 SSBP3-AS1Q7Z2R9 100 aa7.69□□□□□ -1.18
SGCA-201ENST00000262018 A0A087X002 238 aa7.67□□□□□ -1.18
SGCA-201ENST00000262018 NDUFC1O43677 76 aa7.67□□□□□ -1.18
SGCA-201ENST00000262018 TMEM258P61165 79 aa7.67□□□□□ -1.18
SGCA-201ENST00000262018 KRTAP13-2Q52LG2 175 aa7.66□□□□□ -1.18
SGCA-201ENST00000262018 KRTAP3-3Q9BYR6 98 aa7.66□□□□□ -1.18
SGCA-201ENST00000262018 KRTAP3-2Q9BYR7 98 aa7.66□□□□□ -1.18
SGCA-201ENST00000262018 KLKP1Q107X0 134 aa7.65□□□□□ -1.18
SGCA-201ENST00000262018 CD164Q04900 197 aa7.64□□□□□ -1.19
SGCA-201ENST00000262018 HRCT1Q6UXD1 115 aa7.62□□□□□ -1.19
SGCA-201ENST00000262018 TYMSOSQ8TAI1 123 aa7.62□□□□□ -1.19
SGCA-201ENST00000262018 LINC00472Q9H8W2 130 aa7.62□□□□□ -1.19
SGCA-201ENST00000262018 DSCR10P59022 87 aa7.61□□□□□ -1.19
SGCA-201ENST00000262018 A8MWP4 228 aa7.6□□□□□ -1.19
SGCA-201ENST00000262018 HCG22E2RYF7 251 aa7.6□□□□□ -1.19
SGCA-201ENST00000262018 NDUFB1O75438 58 aa7.6□□□□□ -1.19
SGCA-201ENST00000262018 RETNLBQ9BQ08 111 aa7.59□□□□□ -1.19
SGCA-201ENST00000262018 OCR1Q9BZK8 76 aa7.59□□□□□ -1.19
SGCA-201ENST00000262018 ATP5EP56381 51 aaPredicted RBP7.58□□□□□ -1.2
SGCA-201ENST00000262018 Q8N9L7 120 aa7.58□□□□□ -1.2
SGCA-201ENST00000262018 Q96NJ1 140 aa7.58□□□□□ -1.2
SGCA-201ENST00000262018 K7EQZ3 153 aa7.57□□□□□ -1.2
SGCA-201ENST00000262018 DEFB116Q30KQ4 102 aa7.57□□□□□ -1.2
SGCA-201ENST00000262018 RPS28P62857 69 aaKnown RBP7.56□□□□□ -1.2
SGCA-201ENST00000262018 PRR15Q8IV56 129 aa7.56□□□□□ -1.2
SGCA-201ENST00000262018 C20orf197Q8N268 126 aa7.56□□□□□ -1.2
SGCA-201ENST00000262018 KRTAP9-7A8MTY7 169 aa7.55□□□□□ -1.2
SGCA-201ENST00000262018 TPRXLQ17RH7 258 aa7.55□□□□□ -1.2
SGCA-201ENST00000262018 C5orf47Q569G3 176 aa7.55□□□□□ -1.2
SGCA-201ENST00000262018 ASB16-AS1Q495Z4 193 aa7.54□□□□□ -1.2
SGCA-201ENST00000262018 C4orf48Q5BLP8 95 aa7.54□□□□□ -1.2
SGCA-201ENST00000262018 LINC00304Q8N9R0 145 aa7.54□□□□□ -1.2
SGCA-201ENST00000262018 TMEM254Q8TBM7 123 aa7.54□□□□□ -1.2
SGCA-201ENST00000262018 Q5XG85 94 aa7.53□□□□□ -1.2
SGCA-201ENST00000262018 IGLV7-46A0A075B6I9 117 aa7.52□□□□□ -1.2
SGCA-201ENST00000262018 H3BPC8 53 aa7.52□□□□□ -1.2
SGCA-201ENST00000262018 SPAG11AQ6PDA7 123 aa7.51□□□□□ -1.21
SGCA-201ENST00000262018 CASC2Q6XLA1 102 aa7.49□□□□□ -1.21
SGCA-201ENST00000262018 H7BZZ5 65 aa7.48□□□□□ -1.21
SGCA-201ENST00000262018 SPINK1P00995 79 aa7.48□□□□□ -1.21
SGCA-201ENST00000262018 LIMD2Q9BT23 127 aa7.48□□□□□ -1.21
SGCA-201ENST00000262018 TP53AIP1Q9HCN2 124 aa7.48□□□□□ -1.21
SGCA-201ENST00000262018 FAM236DA0A1B0GTK5 79 aa7.46□□□□□ -1.21
SGCA-201ENST00000262018 FAM236CP0DP71 79 aa7.46□□□□□ -1.21
SGCA-201ENST00000262018 MP68P56378 58 aa7.46□□□□□ -1.21
SGCA-201ENST00000262018 RPS29P62273 56 aaKnown RBP7.46□□□□□ -1.21
SGCA-201ENST00000262018 KRTAP4-1Q9BYQ7 146 aa7.46□□□□□ -1.21
SGCA-201ENST00000262018 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.44□□□□□ -1.22
SGCA-201ENST00000262018 A0A1B0GVX0 72 aa7.44□□□□□ -1.22
SGCA-201ENST00000262018 C1orf195Q5TG92 126 aa7.44□□□□□ -1.22
SGCA-201ENST00000262018 hDV103S1A0JD37 113 aa7.43□□□□□ -1.22
SGCA-201ENST00000262018 MMP24-AS1A0A0U1RRL7 71 aa7.42□□□□□ -1.22
SGCA-201ENST00000262018 C8orf87E5RJ46 101 aa7.42□□□□□ -1.22
SGCA-201ENST00000262018 CYSTM1Q9H1C7 97 aa7.42□□□□□ -1.22
SGCA-201ENST00000262018 WFDC13Q8IUB5 93 aa7.41□□□□□ -1.22
SGCA-201ENST00000262018 SNURFQ9Y675 71 aa7.41□□□□□ -1.22
SGCA-201ENST00000262018 C8orf17Q9NRJ1 99 aa7.4□□□□□ -1.22
SGCA-201ENST00000262018 SERP1Q9Y6X1 66 aa7.4□□□□□ -1.22
SGCA-201ENST00000262018 IGHV6-1A0A0B4J1U7 121 aa7.39□□□□□ -1.23
SGCA-201ENST00000262018 ZCCHC13Q8WW36 166 aaKnown RBP7.39□□□□□ -1.23
SGCA-201ENST00000262018 LCE2CQ5TA81 110 aa7.37□□□□□ -1.23
SGCA-201ENST00000262018 TRAV22A0A0B4J277 110 aa7.36□□□□□ -1.23
SGCA-201ENST00000262018 SEC61BP60468 96 aaKnown RBP7.35□□□□□ -1.23
SGCA-201ENST00000262018 NOTCH2NLQ7Z3S9 236 aa7.35□□□□□ -1.23
SGCA-201ENST00000262018 MT1HP80294 61 aa7.34□□□□□ -1.23
SGCA-201ENST00000262018 MRPL34Q9BQ48 92 aaKnown RBP7.34□□□□□ -1.23
SGCA-201ENST00000262018 H0Y9P7 68 aa7.33□□□□□ -1.24
SGCA-201ENST00000262018 SPANXA2-OT1Q8N9U9 137 aa7.33□□□□□ -1.24
SGCA-201ENST00000262018 FP248Q71RG6 208 aaPredicted RBP7.32□□□□□ -1.24
SGCA-201ENST00000262018 LORP23490 312 aaPredicted RBP7.31□□□□□ -1.24
SGCA-201ENST00000262018 KRTAP13-3Q3SY46 172 aa7.31□□□□□ -1.24
SGCA-201ENST00000262018 LINC00313P59037 77 aa7.29□□□□□ -1.24
SGCA-201ENST00000262018 KRTAP10-6P60371 365 aaPredicted RBP7.29□□□□□ -1.24
SGCA-201ENST00000262018 CYP4F30PQ9H0H9 118 aa7.29□□□□□ -1.24
SGCA-201ENST00000262018 LINC00208Q96KT6 92 aa7.27□□□□□ -1.24
SGCA-201ENST00000262018 KRTAP19-2Q3LHN2 52 aa7.27□□□□□ -1.25
SGCA-201ENST00000262018 C1orf64Q8NEQ6 169 aa7.27□□□□□ -1.25
SGCA-201ENST00000262018 SMIM26A0A096LP01 95 aa7.26□□□□□ -1.25
SGCA-201ENST00000262018 KRTAP16-1A8MUX0 517 aa7.25□□□□□ -1.25
SGCA-201ENST00000262018 LOC101927531A0A1B0GV80 90 aa7.24□□□□□ -1.25
SGCA-201ENST00000262018 NDUFS5O43920 106 aa7.23□□□□□ -1.25
SGCA-201ENST00000262018 Q8N9P0 234 aaPredicted RBP7.23□□□□□ -1.25
SGCA-201ENST00000262018 M0R2T5 61 aa7.19□□□□□ -1.26
SGCA-201ENST00000262018 XP32Q5T750 250 aa7.15□□□□□ -1.27
SGCA-201ENST00000262018 Q5W150 140 aa7.14□□□□□ -1.27
SGCA-201ENST00000262018 V9GYY9 64 aa7.13□□□□□ -1.27
SGCA-201ENST00000262018 SSPOA2VEC9 5147 aa7.12□□□□□ -1.27
SGCA-201ENST00000262018 C9orf92A6NGG3 77 aa7.11□□□□□ -1.27
SGCA-201ENST00000262018 C20orf166-AS1Q96NR2 134 aa7.1□□□□□ -1.27
SGCA-201ENST00000262018 A8MUU9 505 aa7.1□□□□□ -1.27
SGCA-201ENST00000262018 PCOTHQ58A44 107 aa7.08□□□□□ -1.28
SGCA-201ENST00000262018 USH2AO75445 5202 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms