RNA–Protein interactions for RNA: ENST00000261908.10

NEO1-201, Transcript of neogenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEO1, Length 7,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-201ENST00000261908 STAB2Q8WWQ8 2551 aa9.4□□□□□ -0.9
NEO1-201ENST00000261908 ZFHX4Q86UP3 3567 aa9.39□□□□□ -0.91
NEO1-201ENST00000261908 NBPF19A0A087WUL8 3843 aa9.38□□□□□ -0.91
NEO1-201ENST00000261908 KRTAP11-1Q8IUC1 163 aa9.37□□□□□ -0.91
NEO1-201ENST00000261908 ASB16-AS1Q495Z4 193 aa9.37□□□□□ -0.91
NEO1-201ENST00000261908 A8MUU9 505 aa9.35□□□□□ -0.91
NEO1-201ENST00000261908 SETXQ7Z333 2677 aaKnown RBP9.32□□□□□ -0.92
NEO1-201ENST00000261908 CSMD1Q96PZ7 3565 aa9.32□□□□□ -0.92
NEO1-201ENST00000261908 ZZEF1O43149 2961 aa9.29□□□□□ -0.92
NEO1-201ENST00000261908 RELNP78509 3460 aa9.28□□□□□ -0.92
NEO1-201ENST00000261908 APCP25054 2843 aa9.27□□□□□ -0.93
NEO1-201ENST00000261908 LCE6AA0A183 80 aa9.25□□□□□ -0.93
NEO1-201ENST00000261908 C10orf95Q9H7T3 257 aa9.25□□□□□ -0.93
NEO1-201ENST00000261908 BAHCC1Q9P281 2608 aa9.23□□□□□ -0.93
NEO1-201ENST00000261908 TACC2O95359 2948 aa9.2□□□□□ -0.94
NEO1-201ENST00000261908 DMDP11532 3685 aa9.2□□□□□ -0.94
NEO1-201ENST00000261908 TNRC18O15417 2968 aaPredicted RBP9.16□□□□□ -0.94
NEO1-201ENST00000261908 KRTAP7-1Q8IUC3 87 aa9.15□□□□□ -0.95
NEO1-201ENST00000261908 DMXL1Q9Y485 3027 aa9.14□□□□□ -0.95
NEO1-201ENST00000261908 NBEAQ8NFP9 2946 aa9.14□□□□□ -0.95
NEO1-201ENST00000261908 ITPR1Q14643 2758 aa9.1□□□□□ -0.95
NEO1-201ENST00000261908 ZNF292O60281 2723 aa9.09□□□□□ -0.95
NEO1-201ENST00000261908 ITPR2Q14571 2701 aa9.08□□□□□ -0.96
NEO1-201ENST00000261908 KRTAP13-2Q52LG2 175 aa9.08□□□□□ -0.96
NEO1-201ENST00000261908 SPENQ96T58 3664 aaKnown RBP9.08□□□□□ -0.96
NEO1-201ENST00000261908 TNP1P09430 55 aa9.04□□□□□ -0.96
NEO1-201ENST00000261908 UBR5O95071 2799 aaPredicted RBP9.04□□□□□ -0.96
NEO1-201ENST00000261908 NSD1Q96L73 2696 aaPredicted RBP9.02□□□□□ -0.96
NEO1-201ENST00000261908 CUBNO60494 3623 aa9.01□□□□□ -0.97
NEO1-201ENST00000261908 A0A1B0GVY2 172 aa9□□□□□ -0.97
NEO1-201ENST00000261908 Q6ZRN7 208 aaPredicted RBP8.96□□□□□ -0.97
NEO1-201ENST00000261908 UTP20O75691 2785 aaKnown RBP8.95□□□□□ -0.98
NEO1-201ENST00000261908 HIVEP1P15822 2718 aa8.94□□□□□ -0.98
NEO1-201ENST00000261908 SMG1Q96Q15 3661 aaKnown RBP8.93□□□□□ -0.98
NEO1-201ENST00000261908 RPS29P62273 56 aaKnown RBP8.91□□□□□ -0.98
NEO1-201ENST00000261908 SVEP1Q4LDE5 3571 aa8.9□□□□□ -0.98
NEO1-201ENST00000261908 KRTAP13-1Q8IUC0 172 aa8.9□□□□□ -0.99
NEO1-201ENST00000261908 KRTAP10-8P60410 259 aa8.87□□□□□ -0.99
NEO1-201ENST00000261908 KMT2BQ9UMN6 2715 aaPredicted RBP8.85□□□□□ -0.99
NEO1-201ENST00000261908 H0YAA0 97 aa8.79□□□□□ -1
NEO1-201ENST00000261908 IGSF10Q6WRI0 2623 aa8.78□□□□□ -1
NEO1-201ENST00000261908 CELSR2Q9HCU4 2923 aa8.78□□□□□ -1
NEO1-201ENST00000261908 ZFHX3Q15911 3703 aa8.73□□□□□ -1.01
NEO1-201ENST00000261908 CELSR1Q9NYQ6 3014 aa8.66□□□□□ -1.02
NEO1-201ENST00000261908 P0C880 135 aa8.66□□□□□ -1.02
NEO1-201ENST00000261908 MUC3AQ02505 3323 aa8.65□□□□□ -1.02
NEO1-201ENST00000261908 PP632Q6XCG6 107 aa8.62□□□□□ -1.03
NEO1-201ENST00000261908 CSMD2Q7Z408 3487 aa8.61□□□□□ -1.03
NEO1-201ENST00000261908 XP32Q5T750 250 aa8.59□□□□□ -1.03
NEO1-201ENST00000261908 DCHS2Q6V1P9 2916 aa8.55□□□□□ -1.04
NEO1-201ENST00000261908 KRTAP10-10P60014 251 aa8.49□□□□□ -1.05
NEO1-201ENST00000261908 KRTAP1-4P0C5Y4 121 aa8.47□□□□□ -1.05
NEO1-201ENST00000261908 FBN2P35556 2912 aa8.44□□□□□ -1.06
NEO1-201ENST00000261908 TENM1Q9UKZ4 2725 aa8.39□□□□□ -1.07
NEO1-201ENST00000261908 TGP01266 2768 aa8.38□□□□□ -1.07
NEO1-201ENST00000261908 FLNCQ14315 2725 aa8.36□□□□□ -1.07
NEO1-201ENST00000261908 NF1P21359 2839 aa8.33□□□□□ -1.08
NEO1-201ENST00000261908 ZANQ9Y493 2812 aa8.31□□□□□ -1.08
NEO1-201ENST00000261908 TENM4Q6N022 2769 aa8.31□□□□□ -1.08
NEO1-201ENST00000261908 NIPBLQ6KC79 2804 aaeCLIP8.3□□□□□ -1.08
NEO1-201ENST00000261908 KRTAP12-2P59991 146 aa8.29□□□□□ -1.08
NEO1-201ENST00000261908 PRO2289Q9P1D8 64 aa8.27□□□□□ -1.09
NEO1-201ENST00000261908 VPS13CQ709C8 3753 aa8.27□□□□□ -1.09
NEO1-201ENST00000261908 PKD1L1Q8TDX9 2849 aa8.26□□□□□ -1.09
NEO1-201ENST00000261908 VWFP04275 2813 aa8.24□□□□□ -1.09
NEO1-201ENST00000261908 TPRXLQ17RH7 258 aa8.22□□□□□ -1.09
NEO1-201ENST00000261908 TENM2Q9NT68 2774 aa8.22□□□□□ -1.09
NEO1-201ENST00000261908 HRNRQ86YZ3 2850 aaPredicted RBP8.2□□□□□ -1.1
NEO1-201ENST00000261908 BSNQ9UPA5 3926 aa8.18□□□□□ -1.1
NEO1-201ENST00000261908 KRTAP13-3Q3SY46 172 aa8.17□□□□□ -1.1
NEO1-201ENST00000261908 CSMD3Q7Z407 3707 aa8.15□□□□□ -1.1
NEO1-201ENST00000261908 PDZD2O15018 2839 aa8.13□□□□□ -1.11
NEO1-201ENST00000261908 TENM3Q9P273 2699 aa8.12□□□□□ -1.11
NEO1-201ENST00000261908 MXRA5Q9NR99 2828 aa8.06□□□□□ -1.12
NEO1-201ENST00000261908 TRRAPQ9Y4A5 3859 aa8.02□□□□□ -1.13
NEO1-201ENST00000261908 KRTAP12-1P59990 96 aa8.01□□□□□ -1.13
NEO1-201ENST00000261908 KRTAP13-4Q3LI77 160 aa7.98□□□□□ -1.13
NEO1-201ENST00000261908 KRTAP21-3Q3LHN1 58 aa7.92□□□□□ -1.14
NEO1-201ENST00000261908 KRTAP15-1Q3LI76 137 aa7.89□□□□□ -1.15
NEO1-201ENST00000261908 CRCT1Q9UGL9 99 aa7.8□□□□□ -1.16
NEO1-201ENST00000261908 KRTAP3-1Q9BYR8 98 aa7.79□□□□□ -1.16
NEO1-201ENST00000261908 SRRM2Q9UQ35 2752 aaKnown RBP7.75□□□□□ -1.17
NEO1-201ENST00000261908 ANK3Q12955 4377 aaKnown RBP7.71□□□□□ -1.17
NEO1-201ENST00000261908 FBN1P35555 2871 aaKnown RBP7.7□□□□□ -1.18
NEO1-201ENST00000261908 ZNF469Q96JG9 3925 aaPredicted RBP7.67□□□□□ -1.18
NEO1-201ENST00000261908 AKAP9Q99996 3911 aa7.67□□□□□ -1.18
NEO1-201ENST00000261908 MEGF8Q7Z7M0 2845 aa7.63□□□□□ -1.19
NEO1-201ENST00000261908 COL7A1Q02388 2944 aa7.6□□□□□ -1.19
NEO1-201ENST00000261908 KRTAP10-6P60371 365 aaPredicted RBP7.59□□□□□ -1.19
NEO1-201ENST00000261908 FBN3Q75N90 2809 aa7.57□□□□□ -1.2
NEO1-201ENST00000261908 KRTAP4-5Q9BYR2 181 aa7.46□□□□□ -1.22
NEO1-201ENST00000261908 HUWE1Q7Z6Z7 4374 aaKnown RBP7.43□□□□□ -1.22
NEO1-201ENST00000261908 INE1O15225 51 aa7.41□□□□□ -1.22
NEO1-201ENST00000261908 OTOGQ6ZRI0 2925 aa7.36□□□□□ -1.23
NEO1-201ENST00000261908 KRTAP10-12P60413 245 aa7.33□□□□□ -1.24
NEO1-201ENST00000261908 KRTAP3-3Q9BYR6 98 aa7.26□□□□□ -1.25
NEO1-201ENST00000261908 KRTAP3-2Q9BYR7 98 aa7.26□□□□□ -1.25
NEO1-201ENST00000261908 LCE3AQ5TA76 89 aa7.15□□□□□ -1.26
NEO1-201ENST00000261908 KRTAP12-3P60328 96 aa7.13□□□□□ -1.27
NEO1-201ENST00000261908 LORP23490 312 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms