RNA–Protein interactions for RNA: ENST00000261890.6

RAB11A-201, Transcript of RAB11A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-201ENST00000261890 TENM4Q6N022 2769 aa4.56□□□□□ -1.68
RAB11A-201ENST00000261890 Q5W150 140 aa4.56□□□□□ -1.68
RAB11A-201ENST00000261890 A0A087X002 238 aa4.55□□□□□ -1.68
RAB11A-201ENST00000261890 Q5XG85 94 aa4.55□□□□□ -1.68
RAB11A-201ENST00000261890 FBN2P35556 2912 aa4.55□□□□□ -1.68
RAB11A-201ENST00000261890 S4R3F8 94 aa4.55□□□□□ -1.68
RAB11A-201ENST00000261890 KRTAP13-1Q8IUC0 172 aa4.53□□□□□ -1.68
RAB11A-201ENST00000261890 STAB2Q8WWQ8 2551 aa4.52□□□□□ -1.69
RAB11A-201ENST00000261890 NIPBLQ6KC79 2804 aaeCLIP4.52□□□□□ -1.69
RAB11A-201ENST00000261890 CRIPTQ9P021 101 aa4.52□□□□□ -1.69
RAB11A-201ENST00000261890 LINC01554Q52M75 96 aa4.51□□□□□ -1.69
RAB11A-201ENST00000261890 Q8N9P0 234 aaPredicted RBP4.51□□□□□ -1.69
RAB11A-201ENST00000261890 KRTAP7-1Q8IUC3 87 aa4.5□□□□□ -1.69
RAB11A-201ENST00000261890 KRTAP11-1Q8IUC1 163 aa4.5□□□□□ -1.69
RAB11A-201ENST00000261890 NF1P21359 2839 aa4.49□□□□□ -1.69
RAB11A-201ENST00000261890 A0A1B0GU33 70 aa4.49□□□□□ -1.69
RAB11A-201ENST00000261890 SPINT4Q6UDR6 99 aa4.49□□□□□ -1.69
RAB11A-201ENST00000261890 CDC42SE1Q9NRR8 79 aa4.47□□□□□ -1.69
RAB11A-201ENST00000261890 ZNF469Q96JG9 3925 aaPredicted RBP4.47□□□□□ -1.69
RAB11A-201ENST00000261890 CAMK2N1Q7Z7J9 78 aa4.47□□□□□ -1.69
RAB11A-201ENST00000261890 KRTAP13-2Q52LG2 175 aa4.46□□□□□ -1.7
RAB11A-201ENST00000261890 Q75L30 129 aa4.46□□□□□ -1.7
RAB11A-201ENST00000261890 A0A0D9SG42 100 aa4.46□□□□□ -1.7
RAB11A-201ENST00000261890 KRTAP29-1A8MX34 341 aaPredicted RBP4.46□□□□□ -1.7
RAB11A-201ENST00000261890 DMAC1Q96GE9 116 aa4.46□□□□□ -1.7
RAB11A-201ENST00000261890 Q1T7F1 81 aa4.45□□□□□ -1.7
RAB11A-201ENST00000261890 MXRA5Q9NR99 2828 aa4.44□□□□□ -1.7
RAB11A-201ENST00000261890 LINC01558Q9Y6Z2 57 aa4.43□□□□□ -1.7
RAB11A-201ENST00000261890 R4GN34 69 aa4.43□□□□□ -1.7
RAB11A-201ENST00000261890 DMBT1Q9UGM3 2413 aaPredicted RBP4.42□□□□□ -1.7
RAB11A-201ENST00000261890 RPL37P61927 97 aaKnown RBP4.41□□□□□ -1.7
RAB11A-201ENST00000261890 H1FX-AS1Q4G0G2 97 aa4.4□□□□□ -1.71
RAB11A-201ENST00000261890 OTOGQ6ZRI0 2925 aa4.39□□□□□ -1.71
RAB11A-201ENST00000261890 NOTCH2NLQ7Z3S9 236 aa4.36□□□□□ -1.71
RAB11A-201ENST00000261890 PDZD2O15018 2839 aa4.34□□□□□ -1.72
RAB11A-201ENST00000261890 A8MUU9 505 aa4.33□□□□□ -1.72
RAB11A-201ENST00000261890 KRTAP1-4P0C5Y4 121 aa4.33□□□□□ -1.72
RAB11A-201ENST00000261890 C20orf166-AS1Q96NR2 134 aa4.32□□□□□ -1.72
RAB11A-201ENST00000261890 M0QZ58 72 aa4.32□□□□□ -1.72
RAB11A-201ENST00000261890 PLAC4Q8WY50 150 aa4.32□□□□□ -1.72
RAB11A-201ENST00000261890 LCA10Q71F78 164 aa4.31□□□□□ -1.72
RAB11A-201ENST00000261890 A0A1B0GVY2 172 aa4.3□□□□□ -1.72
RAB11A-201ENST00000261890 ADM2Q7Z4H4 148 aa4.29□□□□□ -1.72
RAB11A-201ENST00000261890 TPRXLQ17RH7 258 aa4.29□□□□□ -1.72
RAB11A-201ENST00000261890 KTN1-AS1Q86SY8 53 aa4.29□□□□□ -1.72
RAB11A-201ENST00000261890 FLG2Q5D862 2391 aaPredicted RBP4.28□□□□□ -1.72
RAB11A-201ENST00000261890 AKAP9Q99996 3911 aa4.27□□□□□ -1.73
RAB11A-201ENST00000261890 TENM1Q9UKZ4 2725 aa4.26□□□□□ -1.73
RAB11A-201ENST00000261890 CYSTM1Q9H1C7 97 aa4.24□□□□□ -1.73
RAB11A-201ENST00000261890 VWFP04275 2813 aa4.24□□□□□ -1.73
RAB11A-201ENST00000261890 XP32Q5T750 250 aa4.24□□□□□ -1.73
RAB11A-201ENST00000261890 TRRAPQ9Y4A5 3859 aa4.24□□□□□ -1.73
RAB11A-201ENST00000261890 Q5VV11 94 aa4.24□□□□□ -1.73
RAB11A-201ENST00000261890 FBN1P35555 2871 aaKnown RBP4.23□□□□□ -1.73
RAB11A-201ENST00000261890 KRTAP10-8P60410 259 aa4.2□□□□□ -1.74
RAB11A-201ENST00000261890 LUZP6Q538Z0 58 aa4.2□□□□□ -1.74
RAB11A-201ENST00000261890 ANK3Q12955 4377 aaKnown RBP4.2□□□□□ -1.74
RAB11A-201ENST00000261890 TENM2Q9NT68 2774 aa4.19□□□□□ -1.74
RAB11A-201ENST00000261890 ROMO1P60602 79 aa4.18□□□□□ -1.74
RAB11A-201ENST00000261890 KRTAP13-3Q3SY46 172 aa4.17□□□□□ -1.74
RAB11A-201ENST00000261890 TENM3Q9P273 2699 aa4.17□□□□□ -1.74
RAB11A-201ENST00000261890 PKD1L1Q8TDX9 2849 aa4.15□□□□□ -1.74
RAB11A-201ENST00000261890 SPATA8Q6RVD6 105 aa4.14□□□□□ -1.75
RAB11A-201ENST00000261890 KRTAP16-1A8MUX0 517 aa4.11□□□□□ -1.75
RAB11A-201ENST00000261890 TNP1P09430 55 aa4.02□□□□□ -1.77
RAB11A-201ENST00000261890 KRTAP10-10P60014 251 aa4□□□□□ -1.77
RAB11A-201ENST00000261890 A8MU10 97 aa3.99□□□□□ -1.77
RAB11A-201ENST00000261890 TGP01266 2768 aa3.99□□□□□ -1.77
RAB11A-201ENST00000261890 PRAC1Q96KF2 57 aa3.99□□□□□ -1.77
RAB11A-201ENST00000261890 PRO2289Q9P1D8 64 aa3.97□□□□□ -1.77
RAB11A-201ENST00000261890 ANK2Q01484 3957 aa3.94□□□□□ -1.78
RAB11A-201ENST00000261890 DNHD1Q96M86 4753 aa3.93□□□□□ -1.78
RAB11A-201ENST00000261890 PP632Q6XCG6 107 aa3.93□□□□□ -1.78
RAB11A-201ENST00000261890 CSMD3Q7Z407 3707 aa3.9□□□□□ -1.79
RAB11A-201ENST00000261890 KRTAP25-1Q3LHN0 102 aa3.88□□□□□ -1.79
RAB11A-201ENST00000261890 A6NN06 94 aa3.88□□□□□ -1.79
RAB11A-201ENST00000261890 A0A0A0MQY5 61 aa3.88□□□□□ -1.79
RAB11A-201ENST00000261890 MT1HL1P0DM35 61 aa3.88□□□□□ -1.79
RAB11A-201ENST00000261890 H0YAA0 97 aa3.86□□□□□ -1.79
RAB11A-201ENST00000261890 COL7A1Q02388 2944 aa3.86□□□□□ -1.79
RAB11A-201ENST00000261890 FBN3Q75N90 2809 aa3.85□□□□□ -1.79
RAB11A-201ENST00000261890 MEGF8Q7Z7M0 2845 aa3.83□□□□□ -1.8
RAB11A-201ENST00000261890 P0C880 135 aa3.82□□□□□ -1.8
RAB11A-201ENST00000261890 KRTAP10-4P60372 401 aaPredicted RBP3.82□□□□□ -1.8
RAB11A-201ENST00000261890 CMYA5Q8N3K9 4069 aa3.82□□□□□ -1.8
RAB11A-201ENST00000261890 LYSTQ99698 3801 aa3.8□□□□□ -1.8
RAB11A-201ENST00000261890 HUWE1Q7Z6Z7 4374 aaKnown RBP3.78□□□□□ -1.81
RAB11A-201ENST00000261890 PRKDCP78527 4128 aaKnown RBP3.77□□□□□ -1.81
RAB11A-201ENST00000261890 KRTAP4-5Q9BYR2 181 aa3.73□□□□□ -1.81
RAB11A-201ENST00000261890 DNAH9Q9NYC9 4486 aa3.72□□□□□ -1.81
RAB11A-201ENST00000261890 ALMS1Q8TCU4 4167 aa3.72□□□□□ -1.81
RAB11A-201ENST00000261890 KRTAP3-1Q9BYR8 98 aa3.71□□□□□ -1.81
RAB11A-201ENST00000261890 DNAH10Q8IVF4 4471 aa3.69□□□□□ -1.82
RAB11A-201ENST00000261890 C10orf95Q9H7T3 257 aa3.68□□□□□ -1.82
RAB11A-201ENST00000261890 PLECQ15149 4684 aaKnown RBP3.68□□□□□ -1.82
RAB11A-201ENST00000261890 DNAH7Q8WXX0 4024 aa3.68□□□□□ -1.82
RAB11A-201ENST00000261890 STARD9Q9P2P6 4700 aa3.67□□□□□ -1.82
RAB11A-201ENST00000261890 SRRM2Q9UQ35 2752 aaKnown RBP3.66□□□□□ -1.82
RAB11A-201ENST00000261890 DNAH3Q8TD57 4116 aa3.65□□□□□ -1.82
RAB11A-201ENST00000261890 KRTAP13-4Q3LI77 160 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms