RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 KRTAP15-1Q3LI76 137 aa6.77□□□□□ -1.33
PFDN1-201ENST00000261813 C14orf132Q9NPU4 83 aa6.77□□□□□ -1.33
PFDN1-201ENST00000261813 CCKP06307 115 aa6.75□□□□□ -1.33
PFDN1-201ENST00000261813 MOBPQ13875 183 aa6.75□□□□□ -1.33
PFDN1-201ENST00000261813 Q6ZQT0 140 aa6.75□□□□□ -1.33
PFDN1-201ENST00000261813 KRTAP9-8Q9BYQ0 159 aa6.75□□□□□ -1.33
PFDN1-201ENST00000261813 RNF213Q63HN8 5207 aa6.75□□□□□ -1.33
PFDN1-201ENST00000261813 ACYP1P07311 99 aa6.74□□□□□ -1.33
PFDN1-201ENST00000261813 CD164Q04900 197 aa6.73□□□□□ -1.33
PFDN1-201ENST00000261813 Q6Q795 121 aa6.73□□□□□ -1.33
PFDN1-201ENST00000261813 IGFL1Q6UW32 110 aa6.73□□□□□ -1.33
PFDN1-201ENST00000261813 FAM240AA0A1B0GVK7 77 aa6.71□□□□□ -1.33
PFDN1-201ENST00000261813 SPAG11AQ6PDA7 123 aa6.7□□□□□ -1.34
PFDN1-201ENST00000261813 LINC00304Q8N9R0 145 aa6.7□□□□□ -1.34
PFDN1-201ENST00000261813 A0A1W2PNM2 257 aa6.69□□□□□ -1.34
PFDN1-201ENST00000261813 ANAPC13Q9BS18 74 aa6.68□□□□□ -1.34
PFDN1-201ENST00000261813 V9GYY9 64 aa6.67□□□□□ -1.34
PFDN1-201ENST00000261813 LRP2P98164 4655 aa6.67□□□□□ -1.34
PFDN1-201ENST00000261813 TRBV7-7A0A0K0K1E9 115 aa6.66□□□□□ -1.34
PFDN1-201ENST00000261813 SPINK1P00995 79 aa6.66□□□□□ -1.34
PFDN1-201ENST00000261813 RPS29P62273 56 aaKnown RBP6.65□□□□□ -1.35
PFDN1-201ENST00000261813 UBL5Q9BZL1 73 aa6.65□□□□□ -1.35
PFDN1-201ENST00000261813 LIMD2Q9BT23 127 aa6.64□□□□□ -1.35
PFDN1-201ENST00000261813 A0A0G2JQZ4 141 aa6.63□□□□□ -1.35
PFDN1-201ENST00000261813 Q5XG85 94 aa6.63□□□□□ -1.35
PFDN1-201ENST00000261813 A0A087WSZ3 146 aa6.62□□□□□ -1.35
PFDN1-201ENST00000261813 NREPQ16612 68 aa6.62□□□□□ -1.35
PFDN1-201ENST00000261813 HRCT1Q6UXD1 115 aa6.62□□□□□ -1.35
PFDN1-201ENST00000261813 J3KT08 172 aa6.61□□□□□ -1.35
PFDN1-201ENST00000261813 LINC00846Q9NV44 126 aa6.61□□□□□ -1.35
PFDN1-201ENST00000261813 LPAP08519 4548 aa6.6□□□□□ -1.35
PFDN1-201ENST00000261813 ASB16-AS1Q495Z4 193 aa6.6□□□□□ -1.35
PFDN1-201ENST00000261813 RETNLBQ9BQ08 111 aa6.59□□□□□ -1.35
PFDN1-201ENST00000261813 LINC00643Q86TS7 51 aa6.58□□□□□ -1.36
PFDN1-201ENST00000261813 PRO0628Q9UI54 55 aa6.58□□□□□ -1.36
PFDN1-201ENST00000261813 RPS28P62857 69 aaKnown RBP6.57□□□□□ -1.36
PFDN1-201ENST00000261813 PRR4Q16378 134 aa6.57□□□□□ -1.36
PFDN1-201ENST00000261813 Q6ZVQ6 151 aa6.57□□□□□ -1.36
PFDN1-201ENST00000261813 ATP5EP2Q5VTU8 51 aa6.57□□□□□ -1.36
PFDN1-201ENST00000261813 CCDC179H3BU77 68 aa6.55□□□□□ -1.36
PFDN1-201ENST00000261813 BPY2O14599 106 aa6.54□□□□□ -1.36
PFDN1-201ENST00000261813 CXCL6P80162 114 aa6.54□□□□□ -1.36
PFDN1-201ENST00000261813 LINC00472Q9H8W2 130 aa6.54□□□□□ -1.36
PFDN1-201ENST00000261813 NDUFB1O75438 58 aa6.51□□□□□ -1.37
PFDN1-201ENST00000261813 IGLV7-46A0A075B6I9 117 aa6.49□□□□□ -1.37
PFDN1-201ENST00000261813 MT-ATP8P03928 68 aa6.49□□□□□ -1.37
PFDN1-201ENST00000261813 IGKV4-1P06312 121 aa6.49□□□□□ -1.37
PFDN1-201ENST00000261813 C4orf26Q17RF5 130 aa6.49□□□□□ -1.37
PFDN1-201ENST00000261813 C1orf195Q5TG92 126 aa6.49□□□□□ -1.37
PFDN1-201ENST00000261813 FP248Q71RG6 208 aaPredicted RBP6.49□□□□□ -1.37
PFDN1-201ENST00000261813 Q96NJ1 140 aa6.48□□□□□ -1.37
PFDN1-201ENST00000261813 A8MWP4 228 aa6.47□□□□□ -1.37
PFDN1-201ENST00000261813 IMUPQ9GZP8 106 aa6.47□□□□□ -1.37
PFDN1-201ENST00000261813 IGKV3D-7A0A0C4DH55 119 aa6.45□□□□□ -1.38
PFDN1-201ENST00000261813 TPRXLQ17RH7 258 aa6.45□□□□□ -1.38
PFDN1-201ENST00000261813 DEFB116Q30KQ4 102 aa6.45□□□□□ -1.38
PFDN1-201ENST00000261813 A0A0U1RQV1 116 aa6.44□□□□□ -1.38
PFDN1-201ENST00000261813 DSCR10P59022 87 aa6.44□□□□□ -1.38
PFDN1-201ENST00000261813 HIST1H4AP62805 103 aaKnown RBP6.43□□□□□ -1.38
PFDN1-201ENST00000261813 KRTAP13-3Q3SY46 172 aa6.43□□□□□ -1.38
PFDN1-201ENST00000261813 PRR15Q8IV56 129 aa6.43□□□□□ -1.38
PFDN1-201ENST00000261813 MUC17Q685J3 4493 aa6.41□□□□□ -1.38
PFDN1-201ENST00000261813 A0A1B0GVX0 72 aa6.41□□□□□ -1.38
PFDN1-201ENST00000261813 C8orf87E5RJ46 101 aa6.41□□□□□ -1.38
PFDN1-201ENST00000261813 K7EQZ3 153 aa6.39□□□□□ -1.39
PFDN1-201ENST00000261813 IGHV6-1A0A0B4J1U7 121 aa6.38□□□□□ -1.39
PFDN1-201ENST00000261813 LINC00313P59037 77 aa6.37□□□□□ -1.39
PFDN1-201ENST00000261813 MUC2Q02817 5179 aa6.37□□□□□ -1.39
PFDN1-201ENST00000261813 Q8N9L7 120 aa6.36□□□□□ -1.39
PFDN1-201ENST00000261813 FAM236DA0A1B0GTK5 79 aa6.35□□□□□ -1.39
PFDN1-201ENST00000261813 HCG22E2RYF7 251 aa6.35□□□□□ -1.39
PFDN1-201ENST00000261813 FAM236CP0DP71 79 aa6.35□□□□□ -1.39
PFDN1-201ENST00000261813 C8orf17Q9NRJ1 99 aa6.35□□□□□ -1.39
PFDN1-201ENST00000261813 C9orf92A6NGG3 77 aa6.33□□□□□ -1.4
PFDN1-201ENST00000261813 hDV103S1A0JD37 113 aa6.32□□□□□ -1.4
PFDN1-201ENST00000261813 CASC2Q6XLA1 102 aa6.32□□□□□ -1.4
PFDN1-201ENST00000261813 MMP24-AS1A0A0U1RRL7 71 aa6.31□□□□□ -1.4
PFDN1-201ENST00000261813 TMEM254Q8TBM7 123 aa6.31□□□□□ -1.4
PFDN1-201ENST00000261813 A0A087WVE0 104 aa6.31□□□□□ -1.4
PFDN1-201ENST00000261813 FAM236AA0A1B0GUQ0 79 aa6.3□□□□□ -1.4
PFDN1-201ENST00000261813 FAM236BA0A1B0GV22 79 aa6.3□□□□□ -1.4
PFDN1-201ENST00000261813 TMEM258P61165 79 aa6.3□□□□□ -1.4
PFDN1-201ENST00000261813 WFDC13Q8IUB5 93 aa6.3□□□□□ -1.4
PFDN1-201ENST00000261813 UQCRQO14949 82 aa6.29□□□□□ -1.4
PFDN1-201ENST00000261813 MRPL34Q9BQ48 92 aaKnown RBP6.29□□□□□ -1.4
PFDN1-201ENST00000261813 NOTCH2NLQ7Z3S9 236 aa6.27□□□□□ -1.41
PFDN1-201ENST00000261813 TP53AIP1Q9HCN2 124 aa6.26□□□□□ -1.41
PFDN1-201ENST00000261813 FAT4Q6V0I7 4981 aa6.25□□□□□ -1.41
PFDN1-201ENST00000261813 ATOX1O00244 68 aa6.25□□□□□ -1.41
PFDN1-201ENST00000261813 Q8N9P0 234 aaPredicted RBP6.25□□□□□ -1.41
PFDN1-201ENST00000261813 KRTAP16-1A8MUX0 517 aa6.24□□□□□ -1.41
PFDN1-201ENST00000261813 NDUFS5O43920 106 aa6.23□□□□□ -1.41
PFDN1-201ENST00000261813 PMAIP1Q13794 54 aa6.23□□□□□ -1.41
PFDN1-201ENST00000261813 SEC61BP60468 96 aaKnown RBP6.22□□□□□ -1.41
PFDN1-201ENST00000261813 C20orf166-AS1Q96NR2 134 aa6.22□□□□□ -1.41
PFDN1-201ENST00000261813 Q75L30 129 aa6.21□□□□□ -1.41
PFDN1-201ENST00000261813 A8MUU9 505 aa6.2□□□□□ -1.42
PFDN1-201ENST00000261813 RPL37P61927 97 aaKnown RBP6.2□□□□□ -1.42
PFDN1-201ENST00000261813 TRAV7A0A075B6U4 112 aa6.18□□□□□ -1.42
PFDN1-201ENST00000261813 PCOTHQ58A44 107 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms