RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 DSCR10P59022 87 aa11.55□□□□□ -0.56
RTCA-201ENST00000260563 TPRXLQ17RH7 258 aa11.54□□□□□ -0.56
RTCA-201ENST00000260563 LRP2P98164 4655 aa11.53□□□□□ -0.56
RTCA-201ENST00000260563 A8MWP4 228 aa11.53□□□□□ -0.56
RTCA-201ENST00000260563 NDUFB1O75438 58 aa11.5□□□□□ -0.57
RTCA-201ENST00000260563 K7EQZ3 153 aa11.49□□□□□ -0.57
RTCA-201ENST00000260563 Q8N9L7 120 aa11.49□□□□□ -0.57
RTCA-201ENST00000260563 KRTAP13-3Q3SY46 172 aa11.48□□□□□ -0.57
RTCA-201ENST00000260563 MT-ATP8P03928 68 aa11.47□□□□□ -0.57
RTCA-201ENST00000260563 PRR15Q8IV56 129 aa11.47□□□□□ -0.57
RTCA-201ENST00000260563 A0A1B0GVX0 72 aa11.46□□□□□ -0.57
RTCA-201ENST00000260563 IGHV6-1A0A0B4J1U7 121 aa11.45□□□□□ -0.58
RTCA-201ENST00000260563 HIST1H4AP62805 103 aaKnown RBP11.43□□□□□ -0.58
RTCA-201ENST00000260563 C9orf92A6NGG3 77 aa11.4□□□□□ -0.59
RTCA-201ENST00000260563 IMUPQ9GZP8 106 aa11.38□□□□□ -0.59
RTCA-201ENST00000260563 C8orf87E5RJ46 101 aa11.37□□□□□ -0.59
RTCA-201ENST00000260563 C8orf17Q9NRJ1 99 aa11.37□□□□□ -0.59
RTCA-201ENST00000260563 NOTCH2NLQ7Z3S9 236 aa11.36□□□□□ -0.59
RTCA-201ENST00000260563 A0A087WVE0 104 aa11.35□□□□□ -0.59
RTCA-201ENST00000260563 LINC00313P59037 77 aa11.35□□□□□ -0.59
RTCA-201ENST00000260563 MMP24-AS1A0A0U1RRL7 71 aa11.34□□□□□ -0.59
RTCA-201ENST00000260563 HCG22E2RYF7 251 aa11.32□□□□□ -0.6
RTCA-201ENST00000260563 XP32Q5T750 250 aa11.32□□□□□ -0.6
RTCA-201ENST00000260563 WFDC13Q8IUB5 93 aa11.3□□□□□ -0.6
RTCA-201ENST00000260563 hDV103S1A0JD37 113 aa11.28□□□□□ -0.6
RTCA-201ENST00000260563 UBR4Q5T4S7 5183 aa11.28□□□□□ -0.6
RTCA-201ENST00000260563 CASC2Q6XLA1 102 aa11.27□□□□□ -0.61
RTCA-201ENST00000260563 KRTAP16-1A8MUX0 517 aa11.25□□□□□ -0.61
RTCA-201ENST00000260563 TMEM254Q8TBM7 123 aa11.25□□□□□ -0.61
RTCA-201ENST00000260563 MUC17Q685J3 4493 aa11.24□□□□□ -0.61
RTCA-201ENST00000260563 MRPL34Q9BQ48 92 aaKnown RBP11.22□□□□□ -0.61
RTCA-201ENST00000260563 FAM236AA0A1B0GUQ0 79 aa11.17□□□□□ -0.62
RTCA-201ENST00000260563 FAM236BA0A1B0GV22 79 aa11.17□□□□□ -0.62
RTCA-201ENST00000260563 SEC61BP60468 96 aaKnown RBP11.16□□□□□ -0.62
RTCA-201ENST00000260563 Q8N9P0 234 aaPredicted RBP11.15□□□□□ -0.62
RTCA-201ENST00000260563 RPL37P61927 97 aaKnown RBP11.14□□□□□ -0.63
RTCA-201ENST00000260563 C20orf166-AS1Q96NR2 134 aa11.14□□□□□ -0.63
RTCA-201ENST00000260563 NDUFS5O43920 106 aa11.13□□□□□ -0.63
RTCA-201ENST00000260563 A8MUU9 505 aa11.12□□□□□ -0.63
RTCA-201ENST00000260563 SCGB1A1P11684 91 aa11.12□□□□□ -0.63
RTCA-201ENST00000260563 Q75L30 129 aa11.11□□□□□ -0.63
RTCA-201ENST00000260563 PCOTHQ58A44 107 aa11.06□□□□□ -0.64
RTCA-201ENST00000260563 RNF213Q63HN8 5207 aa11.04□□□□□ -0.64
RTCA-201ENST00000260563 TP53AIP1Q9HCN2 124 aa11.04□□□□□ -0.64
RTCA-201ENST00000260563 ATOX1O00244 68 aa11.03□□□□□ -0.64
RTCA-201ENST00000260563 ATP11AUNQ6ZP68 121 aa11.02□□□□□ -0.65
RTCA-201ENST00000260563 OCR1Q9BZK8 76 aa11.02□□□□□ -0.65
RTCA-201ENST00000260563 SMIM20Q8N5G0 67 aa10.99□□□□□ -0.65
RTCA-201ENST00000260563 UQCRQO14949 82 aa10.97□□□□□ -0.65
RTCA-201ENST00000260563 ZCCHC13Q8WW36 166 aaKnown RBP10.96□□□□□ -0.65
RTCA-201ENST00000260563 MUC2Q02817 5179 aa10.96□□□□□ -0.66
RTCA-201ENST00000260563 Q5W150 140 aa10.94□□□□□ -0.66
RTCA-201ENST00000260563 TRAV7A0A075B6U4 112 aa10.93□□□□□ -0.66
RTCA-201ENST00000260563 KRTAP4-1Q9BYQ7 146 aa10.91□□□□□ -0.66
RTCA-201ENST00000260563 TRAV22A0A0B4J277 110 aa10.89□□□□□ -0.67
RTCA-201ENST00000260563 SERP2Q8N6R1 65 aa10.88□□□□□ -0.67
RTCA-201ENST00000260563 H0Y9P7 68 aa10.86□□□□□ -0.67
RTCA-201ENST00000260563 C5orf47Q569G3 176 aa10.86□□□□□ -0.67
RTCA-201ENST00000260563 ANAPC13Q9BS18 74 aa10.85□□□□□ -0.67
RTCA-201ENST00000260563 MP68P56378 58 aa10.83□□□□□ -0.68
RTCA-201ENST00000260563 A0A0U1RQV1 116 aa10.79□□□□□ -0.68
RTCA-201ENST00000260563 COX7CP15954 63 aa10.79□□□□□ -0.68
RTCA-201ENST00000260563 LINC00208Q96KT6 92 aa10.76□□□□□ -0.69
RTCA-201ENST00000260563 H3BPC8 53 aa10.75□□□□□ -0.69
RTCA-201ENST00000260563 IGKV2-30P06310 120 aa10.74□□□□□ -0.69
RTCA-201ENST00000260563 C1orf64Q8NEQ6 169 aa10.74□□□□□ -0.69
RTCA-201ENST00000260563 IGKV2D-30A0A075B6S6 120 aa10.74□□□□□ -0.69
RTCA-201ENST00000260563 LOC101927531A0A1B0GV80 90 aa10.74□□□□□ -0.69
RTCA-201ENST00000260563 SPINK7P58062 85 aa10.72□□□□□ -0.69
RTCA-201ENST00000260563 C7orf65Q6ZTY9 151 aa10.72□□□□□ -0.69
RTCA-201ENST00000260563 C20orf197Q8N268 126 aa10.69□□□□□ -0.7
RTCA-201ENST00000260563 CYP4F30PQ9H0H9 118 aa10.68□□□□□ -0.7
RTCA-201ENST00000260563 SNURFQ9Y675 71 aa10.66□□□□□ -0.7
RTCA-201ENST00000260563 FAT4Q6V0I7 4981 aa10.65□□□□□ -0.7
RTCA-201ENST00000260563 KLKP1Q107X0 134 aa10.62□□□□□ -0.71
RTCA-201ENST00000260563 CCDC179H3BU77 68 aa10.61□□□□□ -0.71
RTCA-201ENST00000260563 KRTAP19-2Q3LHN2 52 aa10.58□□□□□ -0.72
RTCA-201ENST00000260563 HRES1P13985 223 aa10.57□□□□□ -0.72
RTCA-201ENST00000260563 COX6B2Q6YFQ2 88 aa10.56□□□□□ -0.72
RTCA-201ENST00000260563 PCP4P48539 62 aa10.53□□□□□ -0.72
RTCA-201ENST00000260563 RBM12B-AS1Q9P1G2 102 aa10.52□□□□□ -0.73
RTCA-201ENST00000260563 LCE2CQ5TA81 110 aa10.51□□□□□ -0.73
RTCA-201ENST00000260563 CYSTM1Q9H1C7 97 aa10.5□□□□□ -0.73
RTCA-201ENST00000260563 MPLKIPQ8TAP9 179 aa10.49□□□□□ -0.73
RTCA-201ENST00000260563 NDUFC1O43677 76 aa10.48□□□□□ -0.73
RTCA-201ENST00000260563 FAM236DA0A1B0GTK5 79 aa10.47□□□□□ -0.73
RTCA-201ENST00000260563 FAM236CP0DP71 79 aa10.47□□□□□ -0.73
RTCA-201ENST00000260563 C4orf26Q17RF5 130 aa10.47□□□□□ -0.73
RTCA-201ENST00000260563 H7BZZ5 65 aa10.43□□□□□ -0.74
RTCA-201ENST00000260563 LCE2AQ5TA79 106 aaPredicted RBP10.42□□□□□ -0.74
RTCA-201ENST00000260563 MT1HP80294 61 aa10.38□□□□□ -0.75
RTCA-201ENST00000260563 FLGP20930 4061 aaPredicted RBP10.37□□□□□ -0.75
RTCA-201ENST00000260563 SPANXA2-OT1Q8N9U9 137 aa10.36□□□□□ -0.75
RTCA-201ENST00000260563 KRTAP3-1Q9BYR8 98 aa10.33□□□□□ -0.76
RTCA-201ENST00000260563 A8MUN3 132 aa10.28□□□□□ -0.76
RTCA-201ENST00000260563 DMAC1Q96GE9 116 aa10.28□□□□□ -0.76
RTCA-201ENST00000260563 M0R2T5 61 aa10.27□□□□□ -0.77
RTCA-201ENST00000260563 TMEM258P61165 79 aa10.24□□□□□ -0.77
RTCA-201ENST00000260563 H1FX-AS1Q4G0G2 97 aa10.24□□□□□ -0.77
RTCA-201ENST00000260563 ACYP2P14621 99 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms