RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 NDUFS5O43920 106 aa9.72□□□□□ -0.85
UBQLN1-201ENST00000257468 KRTAP10-1P60331 282 aa9.72□□□□□ -0.85
UBQLN1-201ENST00000257468 LINC00336Q6ZUF6 198 aa9.71□□□□□ -0.85
UBQLN1-201ENST00000257468 FAT2Q9NYQ8 4349 aa9.71□□□□□ -0.86
UBQLN1-201ENST00000257468 LRP1BQ9NZR2 4599 aa9.69□□□□□ -0.86
UBQLN1-201ENST00000257468 MRPL34Q9BQ48 92 aaKnown RBP9.67□□□□□ -0.86
UBQLN1-201ENST00000257468 PCOTHQ58A44 107 aa9.67□□□□□ -0.86
UBQLN1-201ENST00000257468 Q6ZSA8 131 aa9.66□□□□□ -0.86
UBQLN1-201ENST00000257468 TP53AIP1Q9HCN2 124 aa9.66□□□□□ -0.86
UBQLN1-201ENST00000257468 SPANXA2-OT1Q8N9U9 137 aa9.66□□□□□ -0.86
UBQLN1-201ENST00000257468 KRTAP13-2Q52LG2 175 aa9.64□□□□□ -0.87
UBQLN1-201ENST00000257468 SSBP3-AS1Q7Z2R9 100 aa9.62□□□□□ -0.87
UBQLN1-201ENST00000257468 CD164Q04900 197 aa9.62□□□□□ -0.87
UBQLN1-201ENST00000257468 PRO0628Q9UI54 55 aa9.61□□□□□ -0.87
UBQLN1-201ENST00000257468 VPS13BQ7Z7G8 4022 aa9.59□□□□□ -0.87
UBQLN1-201ENST00000257468 Q1T7F1 81 aa9.58□□□□□ -0.88
UBQLN1-201ENST00000257468 IGLV7-46A0A075B6I9 117 aa9.57□□□□□ -0.88
UBQLN1-201ENST00000257468 Q5W150 140 aa9.57□□□□□ -0.88
UBQLN1-201ENST00000257468 PSPHP1O15172 72 aa9.55□□□□□ -0.88
UBQLN1-201ENST00000257468 BRK1Q8WUW1 75 aa9.55□□□□□ -0.88
UBQLN1-201ENST00000257468 KRTAP1-4P0C5Y4 121 aa9.54□□□□□ -0.88
UBQLN1-201ENST00000257468 V9GYY9 64 aa9.54□□□□□ -0.88
UBQLN1-201ENST00000257468 PKHD1P08F94 4074 aa9.52□□□□□ -0.89
UBQLN1-201ENST00000257468 C1orf195Q5TG92 126 aa9.52□□□□□ -0.89
UBQLN1-201ENST00000257468 COA5Q86WW8 74 aa9.51□□□□□ -0.89
UBQLN1-201ENST00000257468 KRTAP13-3Q3SY46 172 aa9.5□□□□□ -0.89
UBQLN1-201ENST00000257468 Q8N9P0 234 aaPredicted RBP9.49□□□□□ -0.89
UBQLN1-201ENST00000257468 A8MUN3 132 aa9.47□□□□□ -0.89
UBQLN1-201ENST00000257468 C8orf87E5RJ46 101 aa9.47□□□□□ -0.89
UBQLN1-201ENST00000257468 LINC00313P59037 77 aa9.47□□□□□ -0.89
UBQLN1-201ENST00000257468 RETNLBQ9BQ08 111 aa9.47□□□□□ -0.89
UBQLN1-201ENST00000257468 SACSQ9NZJ4 4579 aa9.45□□□□□ -0.9
UBQLN1-201ENST00000257468 PLA2G1BP04054 148 aaKnown RBP9.44□□□□□ -0.9
UBQLN1-201ENST00000257468 LOC101927531A0A1B0GV80 90 aa9.44□□□□□ -0.9
UBQLN1-201ENST00000257468 HRES1P13985 223 aa9.4□□□□□ -0.9
UBQLN1-201ENST00000257468 LIMD2Q9BT23 127 aa9.4□□□□□ -0.9
UBQLN1-201ENST00000257468 TYMSOSQ8TAI1 123 aa9.39□□□□□ -0.91
UBQLN1-201ENST00000257468 Q5VV11 94 aa9.39□□□□□ -0.91
UBQLN1-201ENST00000257468 KRTAP16-1A8MUX0 517 aa9.38□□□□□ -0.91
UBQLN1-201ENST00000257468 PRR15LQ9BU68 103 aa9.37□□□□□ -0.91
UBQLN1-201ENST00000257468 SMR3BP02814 79 aaPredicted RBP9.36□□□□□ -0.91
UBQLN1-201ENST00000257468 C4orf48Q5BLP8 95 aa9.35□□□□□ -0.91
UBQLN1-201ENST00000257468 PRR26Q8N8Z3 221 aa9.34□□□□□ -0.91
UBQLN1-201ENST00000257468 DYNC1H1Q14204 4646 aaKnown RBP9.34□□□□□ -0.91
UBQLN1-201ENST00000257468 FAM229AH3BQW9 127 aa9.34□□□□□ -0.91
UBQLN1-201ENST00000257468 SPAG11AQ6PDA7 123 aa9.33□□□□□ -0.92
UBQLN1-201ENST00000257468 A8MU10 97 aa9.31□□□□□ -0.92
UBQLN1-201ENST00000257468 CHKB-CPT1BH3BT56 60 aa9.29□□□□□ -0.92
UBQLN1-201ENST00000257468 SPINK1P00995 79 aa9.29□□□□□ -0.92
UBQLN1-201ENST00000257468 A0A1B0GVY2 172 aa9.28□□□□□ -0.92
UBQLN1-201ENST00000257468 IGKV2-30P06310 120 aa9.28□□□□□ -0.92
UBQLN1-201ENST00000257468 RYR2Q92736 4967 aa9.27□□□□□ -0.93
UBQLN1-201ENST00000257468 LINC00304Q8N9R0 145 aa9.26□□□□□ -0.93
UBQLN1-201ENST00000257468 FAT1Q14517 4588 aa9.24□□□□□ -0.93
UBQLN1-201ENST00000257468 IGKV2D-30A0A075B6S6 120 aa9.23□□□□□ -0.93
UBQLN1-201ENST00000257468 LINC01558Q9Y6Z2 57 aa9.23□□□□□ -0.93
UBQLN1-201ENST00000257468 APOBP04114 4563 aaKnown RBP9.22□□□□□ -0.93
UBQLN1-201ENST00000257468 Q75L30 129 aa9.22□□□□□ -0.93
UBQLN1-201ENST00000257468 DMAC1Q96GE9 116 aa9.22□□□□□ -0.93
UBQLN1-201ENST00000257468 ACYP2P14621 99 aa9.21□□□□□ -0.93
UBQLN1-201ENST00000257468 KRTAP10-4P60372 401 aaPredicted RBP9.19□□□□□ -0.94
UBQLN1-201ENST00000257468 A6NED7 52 aa9.17□□□□□ -0.94
UBQLN1-201ENST00000257468 KMT2CQ8NEZ4 4911 aaKnown RBP9.15□□□□□ -0.94
UBQLN1-201ENST00000257468 LCA10Q71F78 164 aa9.14□□□□□ -0.95
UBQLN1-201ENST00000257468 RPS29P62273 56 aaKnown RBP9.14□□□□□ -0.95
UBQLN1-201ENST00000257468 C9orf92A6NGG3 77 aa9.11□□□□□ -0.95
UBQLN1-201ENST00000257468 PKHD1L1Q86WI1 4243 aa9.11□□□□□ -0.95
UBQLN1-201ENST00000257468 SPINK7P58062 85 aa9.1□□□□□ -0.95
UBQLN1-201ENST00000257468 C7orf65Q6ZTY9 151 aa9.07□□□□□ -0.96
UBQLN1-201ENST00000257468 SPTSSBQ8NFR3 76 aa9.05□□□□□ -0.96
UBQLN1-201ENST00000257468 CDC42SE1Q9NRR8 79 aa9.03□□□□□ -0.96
UBQLN1-201ENST00000257468 Q8N1X5 172 aa9.02□□□□□ -0.96
UBQLN1-201ENST00000257468 ATP11AUNQ6ZP68 121 aa9.02□□□□□ -0.97
UBQLN1-201ENST00000257468 PMAIP1Q13794 54 aa9□□□□□ -0.97
UBQLN1-201ENST00000257468 A8MUU9 505 aa8.97□□□□□ -0.97
UBQLN1-201ENST00000257468 C20orf166-AS1Q96NR2 134 aa8.97□□□□□ -0.97
UBQLN1-201ENST00000257468 A0A1B0GU69 56 aa8.95□□□□□ -0.98
UBQLN1-201ENST00000257468 LRP1Q07954 4544 aaKnown RBP8.94□□□□□ -0.98
UBQLN1-201ENST00000257468 FLG2Q5D862 2391 aaPredicted RBP8.92□□□□□ -0.98
UBQLN1-201ENST00000257468 RYR3Q15413 4870 aa8.9□□□□□ -0.99
UBQLN1-201ENST00000257468 TNXBP22105 4242 aa8.87□□□□□ -0.99
UBQLN1-201ENST00000257468 HSPG2P98160 4391 aa8.87□□□□□ -0.99
UBQLN1-201ENST00000257468 A6NN06 94 aa8.85□□□□□ -0.99
UBQLN1-201ENST00000257468 Q5VSD8 79 aa8.84□□□□□ -0.99
UBQLN1-201ENST00000257468 FAT3Q8TDW7 4589 aa8.84□□□□□ -0.99
UBQLN1-201ENST00000257468 KRTAP3-1Q9BYR8 98 aa8.83□□□□□ -1
UBQLN1-201ENST00000257468 KTN1-AS1Q86SY8 53 aa8.81□□□□□ -1
UBQLN1-201ENST00000257468 KRTAP17-1Q9BYP8 105 aa8.8□□□□□ -1
UBQLN1-201ENST00000257468 KRTAP10-8P60410 259 aa8.79□□□□□ -1
UBQLN1-201ENST00000257468 RYR1P21817 5038 aa8.79□□□□□ -1
UBQLN1-201ENST00000257468 UQCR11O14957 56 aa8.74□□□□□ -1.01
UBQLN1-201ENST00000257468 SPATA8Q6RVD6 105 aa8.74□□□□□ -1.01
UBQLN1-201ENST00000257468 MIR22HGQ0VDD5 57 aa8.74□□□□□ -1.01
UBQLN1-201ENST00000257468 DMBT1Q9UGM3 2413 aaPredicted RBP8.69□□□□□ -1.02
UBQLN1-201ENST00000257468 KIAA1109Q2LD37 5005 aa8.69□□□□□ -1.02
UBQLN1-201ENST00000257468 MYCBP2O75592 4640 aa8.68□□□□□ -1.02
UBQLN1-201ENST00000257468 SEC61GP60059 68 aa8.67□□□□□ -1.02
UBQLN1-201ENST00000257468 COX6B2Q6YFQ2 88 aa8.64□□□□□ -1.03
UBQLN1-201ENST00000257468 XP32Q5T750 250 aa8.62□□□□□ -1.03
UBQLN1-201ENST00000257468 RPL37P61927 97 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms