RNA–Protein interactions for RNA: ENST00000257189.4

DSG3-201, Transcript of desmoglein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG3, Length 5,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG3-201ENST00000257189 M0QZ58 72 aa4.91□□□□□ -1.62
DSG3-201ENST00000257189 NDUFAF8A1L188 74 aa4.88□□□□□ -1.63
DSG3-201ENST00000257189 PANO1I0J062 215 aa4.88□□□□□ -1.63
DSG3-201ENST00000257189 DMDP11532 3685 aa4.88□□□□□ -1.63
DSG3-201ENST00000257189 LAMA5O15230 3695 aa4.87□□□□□ -1.63
DSG3-201ENST00000257189 Q8NDZ9 215 aa4.87□□□□□ -1.63
DSG3-201ENST00000257189 TENM4Q6N022 2769 aa4.87□□□□□ -1.63
DSG3-201ENST00000257189 KRTAP10-1P60331 282 aa4.85□□□□□ -1.63
DSG3-201ENST00000257189 ITPR1Q14643 2758 aa4.85□□□□□ -1.63
DSG3-201ENST00000257189 UBR5O95071 2799 aaPredicted RBP4.84□□□□□ -1.63
DSG3-201ENST00000257189 RELNP78509 3460 aa4.84□□□□□ -1.63
DSG3-201ENST00000257189 NBEAL2Q6ZNJ1 2754 aa4.83□□□□□ -1.64
DSG3-201ENST00000257189 ASH1LQ9NR48 2969 aaKnown RBP4.83□□□□□ -1.64
DSG3-201ENST00000257189 ADM2Q7Z4H4 148 aa4.82□□□□□ -1.64
DSG3-201ENST00000257189 ZFHX4Q86UP3 3567 aa4.82□□□□□ -1.64
DSG3-201ENST00000257189 C20orf166-AS1Q96NR2 134 aa4.82□□□□□ -1.64
DSG3-201ENST00000257189 KRTAP10-2P60368 255 aa4.81□□□□□ -1.64
DSG3-201ENST00000257189 KRTAP4-16G5E9R7 235 aaPredicted RBP4.79□□□□□ -1.64
DSG3-201ENST00000257189 RPS29P62273 56 aaKnown RBP4.78□□□□□ -1.64
DSG3-201ENST00000257189 UTP20O75691 2785 aaKnown RBP4.77□□□□□ -1.65
DSG3-201ENST00000257189 PP632Q6XCG6 107 aa4.77□□□□□ -1.65
DSG3-201ENST00000257189 ZANQ9Y493 2812 aa4.77□□□□□ -1.65
DSG3-201ENST00000257189 CRYBG3Q68DQ2 2970 aa4.76□□□□□ -1.65
DSG3-201ENST00000257189 KRTAP11-1Q8IUC1 163 aa4.74□□□□□ -1.65
DSG3-201ENST00000257189 ITPR2Q14571 2701 aa4.74□□□□□ -1.65
DSG3-201ENST00000257189 A8MUU9 505 aa4.72□□□□□ -1.65
DSG3-201ENST00000257189 CELSR2Q9HCU4 2923 aa4.7□□□□□ -1.66
DSG3-201ENST00000257189 TNP1P09430 55 aa4.7□□□□□ -1.66
DSG3-201ENST00000257189 A8MU10 97 aa4.69□□□□□ -1.66
DSG3-201ENST00000257189 NSD1Q96L73 2696 aaPredicted RBP4.67□□□□□ -1.66
DSG3-201ENST00000257189 NF1P21359 2839 aa4.66□□□□□ -1.66
DSG3-201ENST00000257189 NOTCH2NLQ7Z3S9 236 aa4.66□□□□□ -1.66
DSG3-201ENST00000257189 FBN2P35556 2912 aa4.66□□□□□ -1.66
DSG3-201ENST00000257189 DCHS2Q6V1P9 2916 aa4.66□□□□□ -1.66
DSG3-201ENST00000257189 KMT2BQ9UMN6 2715 aaPredicted RBP4.64□□□□□ -1.67
DSG3-201ENST00000257189 SMG1Q96Q15 3661 aaKnown RBP4.64□□□□□ -1.67
DSG3-201ENST00000257189 C10orf95Q9H7T3 257 aa4.64□□□□□ -1.67
DSG3-201ENST00000257189 KRTAP1-5Q9BYS1 174 aa4.63□□□□□ -1.67
DSG3-201ENST00000257189 HIVEP1P15822 2718 aa4.63□□□□□ -1.67
DSG3-201ENST00000257189 CSMD1Q96PZ7 3565 aa4.62□□□□□ -1.67
DSG3-201ENST00000257189 HRNRQ86YZ3 2850 aaPredicted RBP4.62□□□□□ -1.67
DSG3-201ENST00000257189 CUBNO60494 3623 aa4.61□□□□□ -1.67
DSG3-201ENST00000257189 APCP25054 2843 aa4.6□□□□□ -1.67
DSG3-201ENST00000257189 SVEP1Q4LDE5 3571 aa4.59□□□□□ -1.67
DSG3-201ENST00000257189 P0C880 135 aa4.59□□□□□ -1.68
DSG3-201ENST00000257189 SPENQ96T58 3664 aaKnown RBP4.58□□□□□ -1.68
DSG3-201ENST00000257189 NIPBLQ6KC79 2804 aaeCLIP4.57□□□□□ -1.68
DSG3-201ENST00000257189 CELSR1Q9NYQ6 3014 aa4.54□□□□□ -1.68
DSG3-201ENST00000257189 KRTAP13-1Q8IUC0 172 aa4.52□□□□□ -1.69
DSG3-201ENST00000257189 Q6ZRN7 208 aaPredicted RBP4.51□□□□□ -1.69
DSG3-201ENST00000257189 MXRA5Q9NR99 2828 aa4.5□□□□□ -1.69
DSG3-201ENST00000257189 TENM2Q9NT68 2774 aa4.46□□□□□ -1.7
DSG3-201ENST00000257189 H0YAA0 97 aa4.44□□□□□ -1.7
DSG3-201ENST00000257189 KRTAP13-2Q52LG2 175 aa4.43□□□□□ -1.7
DSG3-201ENST00000257189 CSMD2Q7Z408 3487 aa4.42□□□□□ -1.7
DSG3-201ENST00000257189 KRTAP7-1Q8IUC3 87 aa4.42□□□□□ -1.7
DSG3-201ENST00000257189 NBPF19A0A087WUL8 3843 aa4.41□□□□□ -1.7
DSG3-201ENST00000257189 A0A1B0GVY2 172 aa4.36□□□□□ -1.71
DSG3-201ENST00000257189 TPRXLQ17RH7 258 aa4.35□□□□□ -1.71
DSG3-201ENST00000257189 FBN1P35555 2871 aaKnown RBP4.34□□□□□ -1.71
DSG3-201ENST00000257189 KRTAP10-8P60410 259 aa4.34□□□□□ -1.71
DSG3-201ENST00000257189 KRTAP10-10P60014 251 aa4.33□□□□□ -1.72
DSG3-201ENST00000257189 TENM1Q9UKZ4 2725 aa4.31□□□□□ -1.72
DSG3-201ENST00000257189 PKD1L1Q8TDX9 2849 aa4.3□□□□□ -1.72
DSG3-201ENST00000257189 PRO2289Q9P1D8 64 aa4.29□□□□□ -1.72
DSG3-201ENST00000257189 OTOGQ6ZRI0 2925 aa4.29□□□□□ -1.72
DSG3-201ENST00000257189 VWFP04275 2813 aa4.28□□□□□ -1.72
DSG3-201ENST00000257189 TENM3Q9P273 2699 aa4.28□□□□□ -1.72
DSG3-201ENST00000257189 BSNQ9UPA5 3926 aa4.27□□□□□ -1.73
DSG3-201ENST00000257189 FBN3Q75N90 2809 aa4.27□□□□□ -1.73
DSG3-201ENST00000257189 PDZD2O15018 2839 aa4.26□□□□□ -1.73
DSG3-201ENST00000257189 INE1O15225 51 aa4.23□□□□□ -1.73
DSG3-201ENST00000257189 XP32Q5T750 250 aa4.22□□□□□ -1.73
DSG3-201ENST00000257189 KRTAP13-4Q3LI77 160 aa4.19□□□□□ -1.74
DSG3-201ENST00000257189 VPS13CQ709C8 3753 aa4.17□□□□□ -1.74
DSG3-201ENST00000257189 KRTAP1-4P0C5Y4 121 aa4.16□□□□□ -1.74
DSG3-201ENST00000257189 TRRAPQ9Y4A5 3859 aa4.15□□□□□ -1.75
DSG3-201ENST00000257189 KRTAP13-3Q3SY46 172 aa4.14□□□□□ -1.75
DSG3-201ENST00000257189 TGP01266 2768 aa4.13□□□□□ -1.75
DSG3-201ENST00000257189 KRTAP12-2P59991 146 aa4.08□□□□□ -1.76
DSG3-201ENST00000257189 SRRM2Q9UQ35 2752 aaKnown RBP4.07□□□□□ -1.76
DSG3-201ENST00000257189 KRTAP12-1P59990 96 aa4.05□□□□□ -1.76
DSG3-201ENST00000257189 AKAP9Q99996 3911 aa4.04□□□□□ -1.76
DSG3-201ENST00000257189 LORP23490 312 aaPredicted RBP4.03□□□□□ -1.76
DSG3-201ENST00000257189 ANK3Q12955 4377 aaKnown RBP4.03□□□□□ -1.76
DSG3-201ENST00000257189 ZNF469Q96JG9 3925 aaPredicted RBP4.02□□□□□ -1.77
DSG3-201ENST00000257189 KRTAP15-1Q3LI76 137 aa3.99□□□□□ -1.77
DSG3-201ENST00000257189 KRTAP4-5Q9BYR2 181 aa3.97□□□□□ -1.77
DSG3-201ENST00000257189 CSMD3Q7Z407 3707 aa3.92□□□□□ -1.78
DSG3-201ENST00000257189 KRTAP17-1Q9BYP8 105 aa3.88□□□□□ -1.79
DSG3-201ENST00000257189 COL7A1Q02388 2944 aa3.87□□□□□ -1.79
DSG3-201ENST00000257189 KRTAP23-1A1A580 65 aa3.87□□□□□ -1.79
DSG3-201ENST00000257189 KRTAP10-6P60371 365 aaPredicted RBP3.84□□□□□ -1.8
DSG3-201ENST00000257189 KRTAP3-1Q9BYR8 98 aa3.83□□□□□ -1.8
DSG3-201ENST00000257189 MT1HL1P0DM35 61 aa3.81□□□□□ -1.8
DSG3-201ENST00000257189 MEGF8Q7Z7M0 2845 aa3.8□□□□□ -1.8
DSG3-201ENST00000257189 KRTAP9-6A0A140TA67 174 aa3.71□□□□□ -1.82
DSG3-201ENST00000257189 HUWE1Q7Z6Z7 4374 aaKnown RBP3.71□□□□□ -1.82
DSG3-201ENST00000257189 KRTAP10-12P60413 245 aa3.68□□□□□ -1.82
DSG3-201ENST00000257189 KRTAP3-2Q9BYR7 98 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 196.9 ms