RNA–Protein interactions for RNA: ENST00000254190.3

CHSY1-201, Transcript of chondroitin sulfate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHSY1, Length 4,550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHSY1-201ENST00000254190 LINC00483Q53H64 154 aa14.2□□□□□ -0.14
CHSY1-201ENST00000254190 NOTCH2NLQ7Z3S9 236 aa14.2□□□□□ -0.14
CHSY1-201ENST00000254190 ASPMQ8IZT6 3477 aa14.18□□□□□ -0.14
CHSY1-201ENST00000254190 Q6ZR54 194 aa14.17□□□□□ -0.14
CHSY1-201ENST00000254190 KRTAP10-1P60331 282 aa14.17□□□□□ -0.14
CHSY1-201ENST00000254190 DMAC1Q96GE9 116 aa14.1□□□□□ -0.15
CHSY1-201ENST00000254190 TENM3Q9P273 2699 aa14.05□□□□□ -0.16
CHSY1-201ENST00000254190 Q6ZSA8 131 aa14.04□□□□□ -0.16
CHSY1-201ENST00000254190 CELSR1Q9NYQ6 3014 aa14.03□□□□□ -0.16
CHSY1-201ENST00000254190 ZFHX4Q86UP3 3567 aa14.03□□□□□ -0.16
CHSY1-201ENST00000254190 CSAG1Q6PB30 78 aa14.03□□□□□ -0.16
CHSY1-201ENST00000254190 LAMA5O15230 3695 aa14.02□□□□□ -0.17
CHSY1-201ENST00000254190 LCE6AA0A183 80 aa14.01□□□□□ -0.17
CHSY1-201ENST00000254190 MUC3AQ02505 3323 aa13.96□□□□□ -0.17
CHSY1-201ENST00000254190 Q6ZRN7 208 aaPredicted RBP13.96□□□□□ -0.18
CHSY1-201ENST00000254190 A8MU10 97 aa13.86□□□□□ -0.19
CHSY1-201ENST00000254190 KRTAP13-1Q8IUC0 172 aa13.83□□□□□ -0.2
CHSY1-201ENST00000254190 S4R3F8 94 aa13.82□□□□□ -0.2
CHSY1-201ENST00000254190 TENM1Q9UKZ4 2725 aa13.81□□□□□ -0.2
CHSY1-201ENST00000254190 CAMK2N1Q7Z7J9 78 aa13.75□□□□□ -0.21
CHSY1-201ENST00000254190 PDZD2O15018 2839 aa13.75□□□□□ -0.21
CHSY1-201ENST00000254190 PKD1L1Q8TDX9 2849 aa13.72□□□□□ -0.21
CHSY1-201ENST00000254190 SPATA8Q6RVD6 105 aa13.72□□□□□ -0.21
CHSY1-201ENST00000254190 CSMD1Q96PZ7 3565 aa13.72□□□□□ -0.21
CHSY1-201ENST00000254190 H1FX-AS1Q4G0G2 97 aa13.7□□□□□ -0.22
CHSY1-201ENST00000254190 RPL37P61927 97 aaKnown RBP13.69□□□□□ -0.22
CHSY1-201ENST00000254190 ASB16-AS1Q495Z4 193 aa13.68□□□□□ -0.22
CHSY1-201ENST00000254190 KRTAP13-2Q52LG2 175 aa13.68□□□□□ -0.22
CHSY1-201ENST00000254190 Q5VSD8 79 aa13.66□□□□□ -0.22
CHSY1-201ENST00000254190 DMDP11532 3685 aa13.65□□□□□ -0.22
CHSY1-201ENST00000254190 A6NN06 94 aa13.62□□□□□ -0.23
CHSY1-201ENST00000254190 FBN1P35555 2871 aaKnown RBP13.61□□□□□ -0.23
CHSY1-201ENST00000254190 R4GN34 69 aa13.6□□□□□ -0.23
CHSY1-201ENST00000254190 H3BS24 57 aa13.6□□□□□ -0.23
CHSY1-201ENST00000254190 LUZP6Q538Z0 58 aa13.59□□□□□ -0.23
CHSY1-201ENST00000254190 SMG1Q96Q15 3661 aaKnown RBP13.56□□□□□ -0.24
CHSY1-201ENST00000254190 CUBNO60494 3623 aa13.54□□□□□ -0.24
CHSY1-201ENST00000254190 VWFP04275 2813 aa13.54□□□□□ -0.24
CHSY1-201ENST00000254190 ROMO1P60602 79 aa13.54□□□□□ -0.24
CHSY1-201ENST00000254190 ADM2Q7Z4H4 148 aa13.52□□□□□ -0.24
CHSY1-201ENST00000254190 TGP01266 2768 aa13.47□□□□□ -0.25
CHSY1-201ENST00000254190 M0QZ58 72 aa13.4□□□□□ -0.26
CHSY1-201ENST00000254190 SVEP1Q4LDE5 3571 aa13.39□□□□□ -0.27
CHSY1-201ENST00000254190 TENM2Q9NT68 2774 aa13.38□□□□□ -0.27
CHSY1-201ENST00000254190 M0R2T5 61 aa13.38□□□□□ -0.27
CHSY1-201ENST00000254190 SEC61BP60468 96 aaKnown RBP13.35□□□□□ -0.27
CHSY1-201ENST00000254190 RPS29P62273 56 aaKnown RBP13.32□□□□□ -0.28
CHSY1-201ENST00000254190 OTOGQ6ZRI0 2925 aa13.27□□□□□ -0.29
CHSY1-201ENST00000254190 KRTAP25-1Q3LHN0 102 aa13.19□□□□□ -0.3
CHSY1-201ENST00000254190 SRRM2Q9UQ35 2752 aaKnown RBP13.15□□□□□ -0.31
CHSY1-201ENST00000254190 KRTAP1-4P0C5Y4 121 aa13.1□□□□□ -0.31
CHSY1-201ENST00000254190 A8MUU9 505 aa13.07□□□□□ -0.32
CHSY1-201ENST00000254190 ZFHX3Q15911 3703 aa13.02□□□□□ -0.32
CHSY1-201ENST00000254190 C20orf166-AS1Q96NR2 134 aa13.02□□□□□ -0.33
CHSY1-201ENST00000254190 CSMD2Q7Z408 3487 aa12.98□□□□□ -0.33
CHSY1-201ENST00000254190 NBPF19A0A087WUL8 3843 aa12.97□□□□□ -0.33
CHSY1-201ENST00000254190 A0A0A0MQY5 61 aa12.9□□□□□ -0.34
CHSY1-201ENST00000254190 FBN3Q75N90 2809 aa12.87□□□□□ -0.35
CHSY1-201ENST00000254190 KRTAP16-1A8MUX0 517 aa12.85□□□□□ -0.35
CHSY1-201ENST00000254190 SPENQ96T58 3664 aaKnown RBP12.79□□□□□ -0.36
CHSY1-201ENST00000254190 H0YAA0 97 aa12.77□□□□□ -0.36
CHSY1-201ENST00000254190 NDUFAF8A1L188 74 aa12.74□□□□□ -0.37
CHSY1-201ENST00000254190 PLAC4Q8WY50 150 aa12.68□□□□□ -0.38
CHSY1-201ENST00000254190 XP32Q5T750 250 aa12.66□□□□□ -0.38
CHSY1-201ENST00000254190 KRTAP13-3Q3SY46 172 aa12.65□□□□□ -0.38
CHSY1-201ENST00000254190 C10orf95Q9H7T3 257 aa12.64□□□□□ -0.39
CHSY1-201ENST00000254190 COL7A1Q02388 2944 aa12.58□□□□□ -0.4
CHSY1-201ENST00000254190 MEGF8Q7Z7M0 2845 aa12.55□□□□□ -0.4
CHSY1-201ENST00000254190 TRRAPQ9Y4A5 3859 aa12.51□□□□□ -0.41
CHSY1-201ENST00000254190 KRTAP21-3Q3LHN1 58 aa12.49□□□□□ -0.41
CHSY1-201ENST00000254190 P0C880 135 aa12.43□□□□□ -0.42
CHSY1-201ENST00000254190 TNP1P09430 55 aa12.32□□□□□ -0.44
CHSY1-201ENST00000254190 BSNQ9UPA5 3926 aa12.26□□□□□ -0.45
CHSY1-201ENST00000254190 TPRXLQ17RH7 258 aa12.19□□□□□ -0.46
CHSY1-201ENST00000254190 A0A1B0GVY2 172 aa12.17□□□□□ -0.46
CHSY1-201ENST00000254190 ANK3Q12955 4377 aaKnown RBP12.17□□□□□ -0.46
CHSY1-201ENST00000254190 KRTAP10-8P60410 259 aa12.11□□□□□ -0.47
CHSY1-201ENST00000254190 KRTAP3-1Q9BYR8 98 aa12.05□□□□□ -0.48
CHSY1-201ENST00000254190 PP632Q6XCG6 107 aa12.03□□□□□ -0.48
CHSY1-201ENST00000254190 VPS13CQ709C8 3753 aa11.99□□□□□ -0.49
CHSY1-201ENST00000254190 KRTAP12-2P59991 146 aa11.92□□□□□ -0.5
CHSY1-201ENST00000254190 KRTAP12-1P59990 96 aa11.75□□□□□ -0.53
CHSY1-201ENST00000254190 KRTAP10-10P60014 251 aa11.71□□□□□ -0.54
CHSY1-201ENST00000254190 CSMD3Q7Z407 3707 aa11.7□□□□□ -0.54
CHSY1-201ENST00000254190 KRTAP13-4Q3LI77 160 aa11.69□□□□□ -0.54
CHSY1-201ENST00000254190 KRTAP10-6P60371 365 aaPredicted RBP11.66□□□□□ -0.54
CHSY1-201ENST00000254190 ZNF469Q96JG9 3925 aaPredicted RBP11.55□□□□□ -0.56
CHSY1-201ENST00000254190 HUWE1Q7Z6Z7 4374 aaKnown RBP11.36□□□□□ -0.59
CHSY1-201ENST00000254190 KRTAP3-3Q9BYR6 98 aa11.3□□□□□ -0.6
CHSY1-201ENST00000254190 KRTAP3-2Q9BYR7 98 aa11.3□□□□□ -0.6
CHSY1-201ENST00000254190 MT1HL1P0DM35 61 aa11.24□□□□□ -0.61
CHSY1-201ENST00000254190 PRO2289Q9P1D8 64 aa11.22□□□□□ -0.61
CHSY1-201ENST00000254190 KRTAP10-4P60372 401 aaPredicted RBP11.19□□□□□ -0.62
CHSY1-201ENST00000254190 AKAP9Q99996 3911 aa11.08□□□□□ -0.64
CHSY1-201ENST00000254190 KRTAP15-1Q3LI76 137 aa10.89□□□□□ -0.67
CHSY1-201ENST00000254190 KRTAP4-5Q9BYR2 181 aa10.86□□□□□ -0.67
CHSY1-201ENST00000254190 DNAH9Q9NYC9 4486 aa10.86□□□□□ -0.67
CHSY1-201ENST00000254190 DNAH11Q96DT5 4516 aa10.82□□□□□ -0.68
CHSY1-201ENST00000254190 DNAH5Q8TE73 4624 aa10.81□□□□□ -0.68
CHSY1-201ENST00000254190 PLECQ15149 4684 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms