RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 KRTAP10-2P60368 255 aa11.32□□□□□ -0.6
PPFIA1-201ENST00000253925 KRTAP10-1P60331 282 aa11.3□□□□□ -0.6
PPFIA1-201ENST00000253925 KRTAP13-1Q8IUC0 172 aa11.28□□□□□ -0.6
PPFIA1-201ENST00000253925 RELNP78509 3460 aa11.27□□□□□ -0.6
PPFIA1-201ENST00000253925 ASB16-AS1Q495Z4 193 aa11.26□□□□□ -0.61
PPFIA1-201ENST00000253925 LUZP6Q538Z0 58 aa11.26□□□□□ -0.61
PPFIA1-201ENST00000253925 A0A087X002 238 aa11.25□□□□□ -0.61
PPFIA1-201ENST00000253925 NOTCH2NLQ7Z3S9 236 aa11.25□□□□□ -0.61
PPFIA1-201ENST00000253925 ADM2Q7Z4H4 148 aa11.19□□□□□ -0.62
PPFIA1-201ENST00000253925 DCHS1Q96JQ0 3298 aa11.19□□□□□ -0.62
PPFIA1-201ENST00000253925 ZFHX4Q86UP3 3567 aa11.16□□□□□ -0.62
PPFIA1-201ENST00000253925 SPATA8Q6RVD6 105 aa11.14□□□□□ -0.63
PPFIA1-201ENST00000253925 J3QL48 77 aa11.13□□□□□ -0.63
PPFIA1-201ENST00000253925 LAMA5O15230 3695 aa11.13□□□□□ -0.63
PPFIA1-201ENST00000253925 ASPMQ8IZT6 3477 aa11.12□□□□□ -0.63
PPFIA1-201ENST00000253925 MUC3AQ02505 3323 aa11.1□□□□□ -0.63
PPFIA1-201ENST00000253925 DMDP11532 3685 aa11.09□□□□□ -0.63
PPFIA1-201ENST00000253925 ROMO1P60602 79 aa11.07□□□□□ -0.64
PPFIA1-201ENST00000253925 DMBT1Q9UGM3 2413 aaPredicted RBP11.05□□□□□ -0.64
PPFIA1-201ENST00000253925 COX6B2Q6YFQ2 88 aa11.04□□□□□ -0.64
PPFIA1-201ENST00000253925 Q6ZSA8 131 aa11.03□□□□□ -0.64
PPFIA1-201ENST00000253925 H1FX-AS1Q4G0G2 97 aa11.01□□□□□ -0.65
PPFIA1-201ENST00000253925 RPL37P61927 97 aaKnown RBP10.99□□□□□ -0.65
PPFIA1-201ENST00000253925 A0A0A0MQY5 61 aa10.98□□□□□ -0.65
PPFIA1-201ENST00000253925 KRTAP13-2Q52LG2 175 aa10.98□□□□□ -0.65
PPFIA1-201ENST00000253925 KRTAP25-1Q3LHN0 102 aa10.97□□□□□ -0.65
PPFIA1-201ENST00000253925 TENM4Q6N022 2769 aa10.95□□□□□ -0.66
PPFIA1-201ENST00000253925 S4R3F8 94 aa10.95□□□□□ -0.66
PPFIA1-201ENST00000253925 RPS29P62273 56 aaKnown RBP10.94□□□□□ -0.66
PPFIA1-201ENST00000253925 SMG1Q96Q15 3661 aaKnown RBP10.92□□□□□ -0.66
PPFIA1-201ENST00000253925 TENM3Q9P273 2699 aa10.91□□□□□ -0.66
PPFIA1-201ENST00000253925 CELSR1Q9NYQ6 3014 aa10.91□□□□□ -0.66
PPFIA1-201ENST00000253925 CSMD1Q96PZ7 3565 aa10.88□□□□□ -0.67
PPFIA1-201ENST00000253925 KRTAP16-1A8MUX0 517 aa10.87□□□□□ -0.67
PPFIA1-201ENST00000253925 Q5VSD8 79 aa10.83□□□□□ -0.68
PPFIA1-201ENST00000253925 CAMK2N1Q7Z7J9 78 aa10.82□□□□□ -0.68
PPFIA1-201ENST00000253925 PDZD2O15018 2839 aa10.77□□□□□ -0.69
PPFIA1-201ENST00000253925 TENM1Q9UKZ4 2725 aa10.75□□□□□ -0.69
PPFIA1-201ENST00000253925 FLG2Q5D862 2391 aaPredicted RBP10.75□□□□□ -0.69
PPFIA1-201ENST00000253925 NDUFAF8A1L188 74 aa10.74□□□□□ -0.69
PPFIA1-201ENST00000253925 VWFP04275 2813 aa10.64□□□□□ -0.71
PPFIA1-201ENST00000253925 R4GN34 69 aa10.63□□□□□ -0.71
PPFIA1-201ENST00000253925 SEC61BP60468 96 aaKnown RBP10.62□□□□□ -0.71
PPFIA1-201ENST00000253925 KRTAP1-4P0C5Y4 121 aa10.6□□□□□ -0.71
PPFIA1-201ENST00000253925 A8MUU9 505 aa10.6□□□□□ -0.71
PPFIA1-201ENST00000253925 SVEP1Q4LDE5 3571 aa10.59□□□□□ -0.71
PPFIA1-201ENST00000253925 C20orf166-AS1Q96NR2 134 aa10.55□□□□□ -0.72
PPFIA1-201ENST00000253925 M0QZ58 72 aa10.5□□□□□ -0.73
PPFIA1-201ENST00000253925 OTOGQ6ZRI0 2925 aa10.46□□□□□ -0.73
PPFIA1-201ENST00000253925 SPENQ96T58 3664 aaKnown RBP10.44□□□□□ -0.74
PPFIA1-201ENST00000253925 KRTAP21-3Q3LHN1 58 aa10.43□□□□□ -0.74
PPFIA1-201ENST00000253925 FBN1P35555 2871 aaKnown RBP10.41□□□□□ -0.74
PPFIA1-201ENST00000253925 BSNQ9UPA5 3926 aa10.38□□□□□ -0.75
PPFIA1-201ENST00000253925 NBPF19A0A087WUL8 3843 aa10.36□□□□□ -0.75
PPFIA1-201ENST00000253925 KRTAP13-3Q3SY46 172 aa10.35□□□□□ -0.75
PPFIA1-201ENST00000253925 TGP01266 2768 aa10.34□□□□□ -0.75
PPFIA1-201ENST00000253925 M0R2T5 61 aa10.29□□□□□ -0.76
PPFIA1-201ENST00000253925 TENM2Q9NT68 2774 aa10.28□□□□□ -0.76
PPFIA1-201ENST00000253925 PKD1L1Q8TDX9 2849 aa10.27□□□□□ -0.77
PPFIA1-201ENST00000253925 ANK3Q12955 4377 aaKnown RBP10.26□□□□□ -0.77
PPFIA1-201ENST00000253925 H0YAA0 97 aa10.26□□□□□ -0.77
PPFIA1-201ENST00000253925 C10orf95Q9H7T3 257 aa10.25□□□□□ -0.77
PPFIA1-201ENST00000253925 CUBNO60494 3623 aa10.24□□□□□ -0.77
PPFIA1-201ENST00000253925 PLAC4Q8WY50 150 aa10.2□□□□□ -0.78
PPFIA1-201ENST00000253925 CSMD2Q7Z408 3487 aa10.17□□□□□ -0.78
PPFIA1-201ENST00000253925 XP32Q5T750 250 aa10.14□□□□□ -0.79
PPFIA1-201ENST00000253925 ZFHX3Q15911 3703 aa10.06□□□□□ -0.8
PPFIA1-201ENST00000253925 TRRAPQ9Y4A5 3859 aa10.02□□□□□ -0.81
PPFIA1-201ENST00000253925 P0C880 135 aa9.94□□□□□ -0.82
PPFIA1-201ENST00000253925 FBN3Q75N90 2809 aa9.92□□□□□ -0.82
PPFIA1-201ENST00000253925 TPRXLQ17RH7 258 aa9.89□□□□□ -0.83
PPFIA1-201ENST00000253925 A0A1B0GVY2 172 aa9.88□□□□□ -0.83
PPFIA1-201ENST00000253925 SRRM2Q9UQ35 2752 aaKnown RBP9.87□□□□□ -0.83
PPFIA1-201ENST00000253925 KRTAP10-8P60410 259 aa9.85□□□□□ -0.83
PPFIA1-201ENST00000253925 MEGF8Q7Z7M0 2845 aa9.8□□□□□ -0.84
PPFIA1-201ENST00000253925 VPS13CQ709C8 3753 aa9.8□□□□□ -0.84
PPFIA1-201ENST00000253925 TNP1P09430 55 aa9.74□□□□□ -0.85
PPFIA1-201ENST00000253925 PP632Q6XCG6 107 aa9.71□□□□□ -0.86
PPFIA1-201ENST00000253925 KRTAP3-1Q9BYR8 98 aa9.71□□□□□ -0.86
PPFIA1-201ENST00000253925 HUWE1Q7Z6Z7 4374 aaKnown RBP9.56□□□□□ -0.88
PPFIA1-201ENST00000253925 ZNF469Q96JG9 3925 aaPredicted RBP9.54□□□□□ -0.88
PPFIA1-201ENST00000253925 COL7A1Q02388 2944 aa9.48□□□□□ -0.89
PPFIA1-201ENST00000253925 KRTAP12-2P59991 146 aa9.48□□□□□ -0.89
PPFIA1-201ENST00000253925 AKAP9Q99996 3911 aa9.43□□□□□ -0.9
PPFIA1-201ENST00000253925 KRTAP10-6P60371 365 aaPredicted RBP9.39□□□□□ -0.91
PPFIA1-201ENST00000253925 KRTAP12-1P59990 96 aa9.39□□□□□ -0.91
PPFIA1-201ENST00000253925 KRTAP13-4Q3LI77 160 aa9.32□□□□□ -0.92
PPFIA1-201ENST00000253925 KRTAP10-4P60372 401 aaPredicted RBP9.24□□□□□ -0.93
PPFIA1-201ENST00000253925 DNAH9Q9NYC9 4486 aa9.17□□□□□ -0.94
PPFIA1-201ENST00000253925 KRTAP3-3Q9BYR6 98 aa9.16□□□□□ -0.94
PPFIA1-201ENST00000253925 KRTAP15-1Q3LI76 137 aa9.16□□□□□ -0.94
PPFIA1-201ENST00000253925 KRTAP10-10P60014 251 aa9.15□□□□□ -0.94
PPFIA1-201ENST00000253925 KRTAP3-2Q9BYR7 98 aa9.14□□□□□ -0.95
PPFIA1-201ENST00000253925 MT1HL1P0DM35 61 aa9.14□□□□□ -0.95
PPFIA1-201ENST00000253925 CSMD3Q7Z407 3707 aa9.13□□□□□ -0.95
PPFIA1-201ENST00000253925 PLECQ15149 4684 aaKnown RBP9□□□□□ -0.97
PPFIA1-201ENST00000253925 DNAH1Q9P2D7 4330 aa8.99□□□□□ -0.97
PPFIA1-201ENST00000253925 PRO2289Q9P1D8 64 aa8.91□□□□□ -0.98
PPFIA1-201ENST00000253925 DNAH10Q8IVF4 4471 aa8.89□□□□□ -0.99
PPFIA1-201ENST00000253925 ALMS1Q8TCU4 4167 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms