RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 SMG1Q96Q15 3661 aaKnown RBP9.98□□□□□ -0.81
ACTN4-201ENST00000252699 FBN1P35555 2871 aaKnown RBP9.96□□□□□ -0.82
ACTN4-201ENST00000252699 KRTAP13-1Q8IUC0 172 aa9.95□□□□□ -0.82
ACTN4-201ENST00000252699 PKD1L1Q8TDX9 2849 aa9.94□□□□□ -0.82
ACTN4-201ENST00000252699 VWFP04275 2813 aa9.93□□□□□ -0.82
ACTN4-201ENST00000252699 SPINK7P58062 85 aa9.93□□□□□ -0.82
ACTN4-201ENST00000252699 KRTAP29-1A8MX34 341 aaPredicted RBP9.91□□□□□ -0.82
ACTN4-201ENST00000252699 TENM2Q9NT68 2774 aa9.9□□□□□ -0.83
ACTN4-201ENST00000252699 NBPF19A0A087WUL8 3843 aa9.89□□□□□ -0.83
ACTN4-201ENST00000252699 NOTCH2NLQ7Z3S9 236 aa9.86□□□□□ -0.83
ACTN4-201ENST00000252699 Q1T7F1 81 aa9.85□□□□□ -0.83
ACTN4-201ENST00000252699 KRTAP13-2Q52LG2 175 aa9.84□□□□□ -0.83
ACTN4-201ENST00000252699 LINC01554Q52M75 96 aa9.82□□□□□ -0.84
ACTN4-201ENST00000252699 ZFHX3Q15911 3703 aa9.82□□□□□ -0.84
ACTN4-201ENST00000252699 FP248Q71RG6 208 aaPredicted RBP9.81□□□□□ -0.84
ACTN4-201ENST00000252699 ASB16-AS1Q495Z4 193 aa9.81□□□□□ -0.84
ACTN4-201ENST00000252699 A0A0D9SG42 100 aa9.8□□□□□ -0.84
ACTN4-201ENST00000252699 CSMD1Q96PZ7 3565 aa9.78□□□□□ -0.84
ACTN4-201ENST00000252699 SEC61BP60468 96 aaKnown RBP9.77□□□□□ -0.84
ACTN4-201ENST00000252699 TGP01266 2768 aa9.76□□□□□ -0.85
ACTN4-201ENST00000252699 CDC42SE1Q9NRR8 79 aa9.74□□□□□ -0.85
ACTN4-201ENST00000252699 LINC01558Q9Y6Z2 57 aa9.73□□□□□ -0.85
ACTN4-201ENST00000252699 RPS29P62273 56 aaKnown RBP9.73□□□□□ -0.85
ACTN4-201ENST00000252699 A0A1B0GU33 70 aa9.73□□□□□ -0.85
ACTN4-201ENST00000252699 SPINT4Q6UDR6 99 aa9.73□□□□□ -0.85
ACTN4-201ENST00000252699 CSAG1Q6PB30 78 aa9.72□□□□□ -0.85
ACTN4-201ENST00000252699 S4R3F8 94 aa9.7□□□□□ -0.86
ACTN4-201ENST00000252699 Q5XG85 94 aa9.69□□□□□ -0.86
ACTN4-201ENST00000252699 SVEP1Q4LDE5 3571 aa9.69□□□□□ -0.86
ACTN4-201ENST00000252699 DMAC1Q96GE9 116 aa9.68□□□□□ -0.86
ACTN4-201ENST00000252699 SPENQ96T58 3664 aaKnown RBP9.67□□□□□ -0.86
ACTN4-201ENST00000252699 Q75L30 129 aa9.67□□□□□ -0.86
ACTN4-201ENST00000252699 CSMD2Q7Z408 3487 aa9.67□□□□□ -0.86
ACTN4-201ENST00000252699 M0R2T5 61 aa9.66□□□□□ -0.86
ACTN4-201ENST00000252699 OXTP01178 125 aa9.62□□□□□ -0.87
ACTN4-201ENST00000252699 CRIPTQ9P021 101 aa9.62□□□□□ -0.87
ACTN4-201ENST00000252699 Q5VV11 94 aa9.57□□□□□ -0.88
ACTN4-201ENST00000252699 KRTAP1-4P0C5Y4 121 aa9.53□□□□□ -0.88
ACTN4-201ENST00000252699 BSNQ9UPA5 3926 aa9.51□□□□□ -0.89
ACTN4-201ENST00000252699 KTN1-AS1Q86SY8 53 aa9.51□□□□□ -0.89
ACTN4-201ENST00000252699 CUBNO60494 3623 aa9.49□□□□□ -0.89
ACTN4-201ENST00000252699 CAMK2N1Q7Z7J9 78 aa9.47□□□□□ -0.89
ACTN4-201ENST00000252699 ANK3Q12955 4377 aaKnown RBP9.46□□□□□ -0.89
ACTN4-201ENST00000252699 R4GN34 69 aa9.45□□□□□ -0.9
ACTN4-201ENST00000252699 RPL37P61927 97 aaKnown RBP9.4□□□□□ -0.9
ACTN4-201ENST00000252699 LCA10Q71F78 164 aa9.38□□□□□ -0.91
ACTN4-201ENST00000252699 TRRAPQ9Y4A5 3859 aa9.36□□□□□ -0.91
ACTN4-201ENST00000252699 A8MUU9 505 aa9.35□□□□□ -0.91
ACTN4-201ENST00000252699 H1FX-AS1Q4G0G2 97 aa9.33□□□□□ -0.92
ACTN4-201ENST00000252699 C20orf166-AS1Q96NR2 134 aa9.32□□□□□ -0.92
ACTN4-201ENST00000252699 ADM2Q7Z4H4 148 aa9.3□□□□□ -0.92
ACTN4-201ENST00000252699 SRRM2Q9UQ35 2752 aaKnown RBP9.29□□□□□ -0.92
ACTN4-201ENST00000252699 M0QZ58 72 aa9.29□□□□□ -0.92
ACTN4-201ENST00000252699 SPATA8Q6RVD6 105 aa9.25□□□□□ -0.93
ACTN4-201ENST00000252699 A0A1B0GVY2 172 aa9.23□□□□□ -0.93
ACTN4-201ENST00000252699 FBN3Q75N90 2809 aa9.18□□□□□ -0.94
ACTN4-201ENST00000252699 PRAC1Q96KF2 57 aa9.18□□□□□ -0.94
ACTN4-201ENST00000252699 XP32Q5T750 250 aa9.18□□□□□ -0.94
ACTN4-201ENST00000252699 KRTAP16-1A8MUX0 517 aa9.11□□□□□ -0.95
ACTN4-201ENST00000252699 MEGF8Q7Z7M0 2845 aa9.08□□□□□ -0.96
ACTN4-201ENST00000252699 ROMO1P60602 79 aa9.05□□□□□ -0.96
ACTN4-201ENST00000252699 TPRXLQ17RH7 258 aa9.04□□□□□ -0.96
ACTN4-201ENST00000252699 A8MU10 97 aa9.03□□□□□ -0.96
ACTN4-201ENST00000252699 KRTAP10-8P60410 259 aa9.03□□□□□ -0.96
ACTN4-201ENST00000252699 KRTAP13-3Q3SY46 172 aa8.99□□□□□ -0.97
ACTN4-201ENST00000252699 COL7A1Q02388 2944 aa8.98□□□□□ -0.97
ACTN4-201ENST00000252699 PLAC4Q8WY50 150 aa8.97□□□□□ -0.97
ACTN4-201ENST00000252699 VPS13CQ709C8 3753 aa8.92□□□□□ -0.98
ACTN4-201ENST00000252699 LUZP6Q538Z0 58 aa8.88□□□□□ -0.99
ACTN4-201ENST00000252699 ZNF469Q96JG9 3925 aaPredicted RBP8.88□□□□□ -0.99
ACTN4-201ENST00000252699 A6NN06 94 aa8.81□□□□□ -1
ACTN4-201ENST00000252699 HUWE1Q7Z6Z7 4374 aaKnown RBP8.73□□□□□ -1.01
ACTN4-201ENST00000252699 AKAP9Q99996 3911 aa8.67□□□□□ -1.02
ACTN4-201ENST00000252699 KRTAP25-1Q3LHN0 102 aa8.61□□□□□ -1.03
ACTN4-201ENST00000252699 H0YAA0 97 aa8.61□□□□□ -1.03
ACTN4-201ENST00000252699 P0C880 135 aa8.59□□□□□ -1.03
ACTN4-201ENST00000252699 TNP1P09430 55 aa8.51□□□□□ -1.05
ACTN4-201ENST00000252699 KRTAP10-10P60014 251 aa8.49□□□□□ -1.05
ACTN4-201ENST00000252699 MT1HL1P0DM35 61 aa8.49□□□□□ -1.05
ACTN4-201ENST00000252699 DNAH9Q9NYC9 4486 aa8.47□□□□□ -1.05
ACTN4-201ENST00000252699 KRTAP10-4P60372 401 aaPredicted RBP8.47□□□□□ -1.05
ACTN4-201ENST00000252699 KRTAP3-1Q9BYR8 98 aa8.43□□□□□ -1.06
ACTN4-201ENST00000252699 A0A0A0MQY5 61 aa8.42□□□□□ -1.06
ACTN4-201ENST00000252699 DNHD1Q96M86 4753 aa8.42□□□□□ -1.06
ACTN4-201ENST00000252699 CSMD3Q7Z407 3707 aa8.36□□□□□ -1.07
ACTN4-201ENST00000252699 KRTAP4-5Q9BYR2 181 aa8.34□□□□□ -1.07
ACTN4-201ENST00000252699 C10orf95Q9H7T3 257 aa8.32□□□□□ -1.08
ACTN4-201ENST00000252699 H3BS24 57 aa8.28□□□□□ -1.08
ACTN4-201ENST00000252699 PLECQ15149 4684 aaKnown RBP8.25□□□□□ -1.09
ACTN4-201ENST00000252699 PP632Q6XCG6 107 aa8.22□□□□□ -1.09
ACTN4-201ENST00000252699 DNAH5Q8TE73 4624 aa8.21□□□□□ -1.1
ACTN4-201ENST00000252699 ALMS1Q8TCU4 4167 aa8.19□□□□□ -1.1
ACTN4-201ENST00000252699 DNAH1Q9P2D7 4330 aa8.14□□□□□ -1.11
ACTN4-201ENST00000252699 KRTAP12-2P59991 146 aa8.13□□□□□ -1.11
ACTN4-201ENST00000252699 PRO2289Q9P1D8 64 aa8.12□□□□□ -1.11
ACTN4-201ENST00000252699 DNAH11Q96DT5 4516 aa8.11□□□□□ -1.11
ACTN4-201ENST00000252699 KRTAP10-6P60371 365 aaPredicted RBP8.07□□□□□ -1.12
ACTN4-201ENST00000252699 KRTAP12-1P59990 96 aa8.06□□□□□ -1.12
ACTN4-201ENST00000252699 VPS13DQ5THJ4 4388 aa8.05□□□□□ -1.12
ACTN4-201ENST00000252699 NDUFAF8A1L188 74 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms