RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 C14orf132Q9NPU4 83 aa13.15□□□□□ -0.3
LSM7-201ENST00000252622 KRTAP16-1A8MUX0 517 aa13.14□□□□□ -0.31
LSM7-201ENST00000252622 J3KT08 172 aa13.13□□□□□ -0.31
LSM7-201ENST00000252622 IGHV6-1A0A0B4J1U7 121 aa13.12□□□□□ -0.31
LSM7-201ENST00000252622 NOTCH2NLQ7Z3S9 236 aa13.11□□□□□ -0.31
LSM7-201ENST00000252622 A0A1B0GVX0 72 aa13.1□□□□□ -0.31
LSM7-201ENST00000252622 C8orf87E5RJ46 101 aa13.09□□□□□ -0.31
LSM7-201ENST00000252622 MTURNQ8N3F0 131 aa13.06□□□□□ -0.32
LSM7-201ENST00000252622 COL5A1-AS1Q5SY13 56 aa13.05□□□□□ -0.32
LSM7-201ENST00000252622 SPCS1Q9Y6A9 102 aa13.05□□□□□ -0.32
LSM7-201ENST00000252622 MT1HP80294 61 aa13.04□□□□□ -0.32
LSM7-201ENST00000252622 COX6B2Q6YFQ2 88 aa13□□□□□ -0.33
LSM7-201ENST00000252622 NDUFB1O75438 58 aa12.99□□□□□ -0.33
LSM7-201ENST00000252622 A8MWP4 228 aa12.97□□□□□ -0.33
LSM7-201ENST00000252622 NREPQ16612 68 aa12.95□□□□□ -0.34
LSM7-201ENST00000252622 FLGP20930 4061 aaPredicted RBP12.9□□□□□ -0.34
LSM7-201ENST00000252622 IGKV3D-7A0A0C4DH55 119 aa12.9□□□□□ -0.34
LSM7-201ENST00000252622 SMCPP49901 116 aaPredicted RBP12.9□□□□□ -0.34
LSM7-201ENST00000252622 C8orf17Q9NRJ1 99 aa12.89□□□□□ -0.35
LSM7-201ENST00000252622 K7EP34 96 aa12.88□□□□□ -0.35
LSM7-201ENST00000252622 PRR15Q8IV56 129 aa12.85□□□□□ -0.35
LSM7-201ENST00000252622 PRO0461Q9UI25 63 aa12.85□□□□□ -0.35
LSM7-201ENST00000252622 Q8N9P0 234 aaPredicted RBP12.84□□□□□ -0.35
LSM7-201ENST00000252622 PCP4L1A6NKN8 68 aa12.82□□□□□ -0.36
LSM7-201ENST00000252622 ZCCHC13Q8WW36 166 aaKnown RBP12.8□□□□□ -0.36
LSM7-201ENST00000252622 M0R2T5 61 aa12.79□□□□□ -0.36
LSM7-201ENST00000252622 Q6ZVQ6 151 aa12.78□□□□□ -0.36
LSM7-201ENST00000252622 KRTAP10-6P60371 365 aaPredicted RBP12.75□□□□□ -0.37
LSM7-201ENST00000252622 GTF2H5Q6ZYL4 71 aa12.75□□□□□ -0.37
LSM7-201ENST00000252622 MMP24-AS1A0A0U1RRL7 71 aa12.74□□□□□ -0.37
LSM7-201ENST00000252622 BPY2O14599 106 aa12.74□□□□□ -0.37
LSM7-201ENST00000252622 LORP23490 312 aaPredicted RBP12.74□□□□□ -0.37
LSM7-201ENST00000252622 K7EQZ3 153 aa12.73□□□□□ -0.37
LSM7-201ENST00000252622 HRES1P13985 223 aa12.72□□□□□ -0.37
LSM7-201ENST00000252622 TMEM254Q8TBM7 123 aa12.72□□□□□ -0.37
LSM7-201ENST00000252622 MPLKIPQ8TAP9 179 aa12.71□□□□□ -0.37
LSM7-201ENST00000252622 MRPL34Q9BQ48 92 aaKnown RBP12.69□□□□□ -0.38
LSM7-201ENST00000252622 LCE2DQ5TA82 110 aaPredicted RBP12.68□□□□□ -0.38
LSM7-201ENST00000252622 RBM12B-AS1Q9P1G2 102 aa12.66□□□□□ -0.38
LSM7-201ENST00000252622 hDV103S1A0JD37 113 aa12.65□□□□□ -0.38
LSM7-201ENST00000252622 F8W1H4 67 aa12.65□□□□□ -0.38
LSM7-201ENST00000252622 FAM236DA0A1B0GTK5 79 aa12.63□□□□□ -0.39
LSM7-201ENST00000252622 FAM236CP0DP71 79 aa12.63□□□□□ -0.39
LSM7-201ENST00000252622 SPINK7P58062 85 aa12.63□□□□□ -0.39
LSM7-201ENST00000252622 LINC00846Q9NV44 126 aa12.63□□□□□ -0.39
LSM7-201ENST00000252622 UBL5Q9BZL1 73 aa12.61□□□□□ -0.39
LSM7-201ENST00000252622 Q8N9L7 120 aa12.57□□□□□ -0.4
LSM7-201ENST00000252622 ETDBQ3ZM63 59 aa12.55□□□□□ -0.4
LSM7-201ENST00000252622 NDUFS5O43920 106 aa12.53□□□□□ -0.4
LSM7-201ENST00000252622 CASC2Q6XLA1 102 aa12.51□□□□□ -0.41
LSM7-201ENST00000252622 WFDC13Q8IUB5 93 aa12.51□□□□□ -0.41
LSM7-201ENST00000252622 CRCT1Q9UGL9 99 aa12.49□□□□□ -0.41
LSM7-201ENST00000252622 FSIP2Q5CZC0 6907 aa12.47□□□□□ -0.41
LSM7-201ENST00000252622 HCG22E2RYF7 251 aa12.41□□□□□ -0.42
LSM7-201ENST00000252622 Q5W150 140 aa12.39□□□□□ -0.43
LSM7-201ENST00000252622 CXCL6P80162 114 aa12.38□□□□□ -0.43
LSM7-201ENST00000252622 KRTAP9-8Q9BYQ0 159 aa12.37□□□□□ -0.43
LSM7-201ENST00000252622 C7orf65Q6ZTY9 151 aa12.32□□□□□ -0.44
LSM7-201ENST00000252622 IGKV2D-30A0A075B6S6 120 aa12.31□□□□□ -0.44
LSM7-201ENST00000252622 IGKV2-30P06310 120 aa12.31□□□□□ -0.44
LSM7-201ENST00000252622 ACYP1P07311 99 aa12.29□□□□□ -0.44
LSM7-201ENST00000252622 FAM240AA0A1B0GVK7 77 aa12.26□□□□□ -0.45
LSM7-201ENST00000252622 MT2AP02795 61 aa12.22□□□□□ -0.45
LSM7-201ENST00000252622 TP53AIP1Q9HCN2 124 aa12.19□□□□□ -0.46
LSM7-201ENST00000252622 H1FX-AS1Q4G0G2 97 aa12.16□□□□□ -0.46
LSM7-201ENST00000252622 ATP5EP2Q5VTU8 51 aa12.16□□□□□ -0.46
LSM7-201ENST00000252622 A0A1B0GV90 55 aa12.15□□□□□ -0.46
LSM7-201ENST00000252622 MT1FP04733 61 aa12.12□□□□□ -0.47
LSM7-201ENST00000252622 C4orf26Q17RF5 130 aa12.07□□□□□ -0.48
LSM7-201ENST00000252622 KRTAP10-10P60014 251 aa12.05□□□□□ -0.48
LSM7-201ENST00000252622 USH2AO75445 5202 aa12.02□□□□□ -0.48
LSM7-201ENST00000252622 HIST1H4AP62805 103 aaKnown RBP12□□□□□ -0.49
LSM7-201ENST00000252622 LINC00643Q86TS7 51 aa11.99□□□□□ -0.49
LSM7-201ENST00000252622 KRTAP9-3Q9BYQ3 159 aa11.98□□□□□ -0.49
LSM7-201ENST00000252622 TRAV22A0A0B4J277 110 aa11.93□□□□□ -0.5
LSM7-201ENST00000252622 KRTAP3-1Q9BYR8 98 aa11.91□□□□□ -0.5
LSM7-201ENST00000252622 C1orf64Q8NEQ6 169 aa11.89□□□□□ -0.51
LSM7-201ENST00000252622 CYP4F30PQ9H0H9 118 aa11.88□□□□□ -0.51
LSM7-201ENST00000252622 SSPOA2VEC9 5147 aa11.86□□□□□ -0.51
LSM7-201ENST00000252622 A0A087WVE0 104 aa11.86□□□□□ -0.51
LSM7-201ENST00000252622 LOC101927531A0A1B0GV80 90 aa11.86□□□□□ -0.51
LSM7-201ENST00000252622 LCE2BO14633 110 aa11.86□□□□□ -0.51
LSM7-201ENST00000252622 UQCRQO14949 82 aa11.86□□□□□ -0.51
LSM7-201ENST00000252622 J3QR89 54 aa11.84□□□□□ -0.51
LSM7-201ENST00000252622 KRTAP9-7A8MTY7 169 aa11.81□□□□□ -0.52
LSM7-201ENST00000252622 S4R3F8 94 aa11.8□□□□□ -0.52
LSM7-201ENST00000252622 ATOX1O00244 68 aa11.79□□□□□ -0.52
LSM7-201ENST00000252622 H0Y9P7 68 aa11.77□□□□□ -0.53
LSM7-201ENST00000252622 C5orf47Q569G3 176 aa11.74□□□□□ -0.53
LSM7-201ENST00000252622 LCA10Q71F78 164 aa11.71□□□□□ -0.53
LSM7-201ENST00000252622 CSAG1Q6PB30 78 aa11.68□□□□□ -0.54
LSM7-201ENST00000252622 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.67□□□□□ -0.54
LSM7-201ENST00000252622 OCR1Q9BZK8 76 aa11.67□□□□□ -0.54
LSM7-201ENST00000252622 MP68P56378 58 aa11.59□□□□□ -0.55
LSM7-201ENST00000252622 LINC00208Q96KT6 92 aa11.59□□□□□ -0.55
LSM7-201ENST00000252622 KRTAP19-1Q8IUB9 90 aa11.57□□□□□ -0.56
LSM7-201ENST00000252622 KRTAP3-3Q9BYR6 98 aa11.57□□□□□ -0.56
LSM7-201ENST00000252622 FAM236AA0A1B0GUQ0 79 aa11.53□□□□□ -0.56
LSM7-201ENST00000252622 FAM236BA0A1B0GV22 79 aa11.53□□□□□ -0.56
LSM7-201ENST00000252622 FCGBPQ9Y6R7 5405 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms