RNA–Protein interactions for RNA: ENST00000252085.3

PCDHGA12-201, Transcript of protocadherin gamma subfamily A, 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA12, Length 4,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12-201ENST00000252085 TENM4Q6N022 2769 aa7.56□□□□□ -1.2
PCDHGA12-201ENST00000252085 A8MU10 97 aa7.56□□□□□ -1.2
PCDHGA12-201ENST00000252085 FBN2P35556 2912 aa7.55□□□□□ -1.2
PCDHGA12-201ENST00000252085 SPATA8Q6RVD6 105 aa7.53□□□□□ -1.2
PCDHGA12-201ENST00000252085 ADM2Q7Z4H4 148 aa7.53□□□□□ -1.2
PCDHGA12-201ENST00000252085 KRTAP11-1Q8IUC1 163 aa7.53□□□□□ -1.2
PCDHGA12-201ENST00000252085 KRTAP7-1Q8IUC3 87 aa7.53□□□□□ -1.2
PCDHGA12-201ENST00000252085 ROMO1P60602 79 aa7.52□□□□□ -1.21
PCDHGA12-201ENST00000252085 CRYBG3Q68DQ2 2970 aa7.52□□□□□ -1.21
PCDHGA12-201ENST00000252085 Q6ZSA8 131 aa7.5□□□□□ -1.21
PCDHGA12-201ENST00000252085 KRTAP29-1A8MX34 341 aaPredicted RBP7.5□□□□□ -1.21
PCDHGA12-201ENST00000252085 Q6ZRN7 208 aaPredicted RBP7.5□□□□□ -1.21
PCDHGA12-201ENST00000252085 LCE6AA0A183 80 aa7.49□□□□□ -1.21
PCDHGA12-201ENST00000252085 KRTAP25-1Q3LHN0 102 aa7.48□□□□□ -1.21
PCDHGA12-201ENST00000252085 WDFY3Q8IZQ1 3526 aa7.47□□□□□ -1.21
PCDHGA12-201ENST00000252085 A0A087X002 238 aa7.46□□□□□ -1.22
PCDHGA12-201ENST00000252085 RPL37P61927 97 aaKnown RBP7.45□□□□□ -1.22
PCDHGA12-201ENST00000252085 NDUFAF8A1L188 74 aa7.43□□□□□ -1.22
PCDHGA12-201ENST00000252085 NOTCH2NLQ7Z3S9 236 aa7.41□□□□□ -1.22
PCDHGA12-201ENST00000252085 Q5VSD8 79 aa7.4□□□□□ -1.22
PCDHGA12-201ENST00000252085 MXRA5Q9NR99 2828 aa7.38□□□□□ -1.23
PCDHGA12-201ENST00000252085 H1FX-AS1Q4G0G2 97 aa7.37□□□□□ -1.23
PCDHGA12-201ENST00000252085 KRTAP13-1Q8IUC0 172 aa7.35□□□□□ -1.23
PCDHGA12-201ENST00000252085 RELNP78509 3460 aa7.35□□□□□ -1.23
PCDHGA12-201ENST00000252085 CAMK2N1Q7Z7J9 78 aa7.34□□□□□ -1.23
PCDHGA12-201ENST00000252085 MUC3AQ02505 3323 aa7.33□□□□□ -1.24
PCDHGA12-201ENST00000252085 S4R3F8 94 aa7.32□□□□□ -1.24
PCDHGA12-201ENST00000252085 DCHS1Q96JQ0 3298 aa7.29□□□□□ -1.24
PCDHGA12-201ENST00000252085 DMDP11532 3685 aa7.28□□□□□ -1.24
PCDHGA12-201ENST00000252085 KRTAP13-2Q52LG2 175 aa7.27□□□□□ -1.25
PCDHGA12-201ENST00000252085 SEC61BP60468 96 aaKnown RBP7.22□□□□□ -1.25
PCDHGA12-201ENST00000252085 TENM3Q9P273 2699 aa7.21□□□□□ -1.26
PCDHGA12-201ENST00000252085 CELSR1Q9NYQ6 3014 aa7.21□□□□□ -1.26
PCDHGA12-201ENST00000252085 A8MUU9 505 aa7.2□□□□□ -1.26
PCDHGA12-201ENST00000252085 LAMA5O15230 3695 aa7.19□□□□□ -1.26
PCDHGA12-201ENST00000252085 RPS29P62273 56 aaKnown RBP7.18□□□□□ -1.26
PCDHGA12-201ENST00000252085 M0R2T5 61 aa7.17□□□□□ -1.26
PCDHGA12-201ENST00000252085 ASPMQ8IZT6 3477 aa7.16□□□□□ -1.26
PCDHGA12-201ENST00000252085 C20orf166-AS1Q96NR2 134 aa7.16□□□□□ -1.26
PCDHGA12-201ENST00000252085 R4GN34 69 aa7.15□□□□□ -1.26
PCDHGA12-201ENST00000252085 TENM1Q9UKZ4 2725 aa7.13□□□□□ -1.27
PCDHGA12-201ENST00000252085 ZFHX4Q86UP3 3567 aa7.12□□□□□ -1.27
PCDHGA12-201ENST00000252085 KRTAP21-3Q3LHN1 58 aa7.09□□□□□ -1.28
PCDHGA12-201ENST00000252085 M0QZ58 72 aa7.05□□□□□ -1.28
PCDHGA12-201ENST00000252085 PDZD2O15018 2839 aa7.04□□□□□ -1.28
PCDHGA12-201ENST00000252085 TENM2Q9NT68 2774 aa7.03□□□□□ -1.28
PCDHGA12-201ENST00000252085 PLAC4Q8WY50 150 aa7.02□□□□□ -1.29
PCDHGA12-201ENST00000252085 PKD1L1Q8TDX9 2849 aa7.01□□□□□ -1.29
PCDHGA12-201ENST00000252085 SMG1Q96Q15 3661 aaKnown RBP7.01□□□□□ -1.29
PCDHGA12-201ENST00000252085 KRTAP1-4P0C5Y4 121 aa6.99□□□□□ -1.29
PCDHGA12-201ENST00000252085 VWFP04275 2813 aa6.96□□□□□ -1.3
PCDHGA12-201ENST00000252085 FBN1P35555 2871 aaKnown RBP6.96□□□□□ -1.3
PCDHGA12-201ENST00000252085 OTOGQ6ZRI0 2925 aa6.93□□□□□ -1.3
PCDHGA12-201ENST00000252085 TGP01266 2768 aa6.93□□□□□ -1.3
PCDHGA12-201ENST00000252085 CSMD1Q96PZ7 3565 aa6.92□□□□□ -1.3
PCDHGA12-201ENST00000252085 SPENQ96T58 3664 aaKnown RBP6.92□□□□□ -1.3
PCDHGA12-201ENST00000252085 C10orf95Q9H7T3 257 aa6.85□□□□□ -1.31
PCDHGA12-201ENST00000252085 NBPF19A0A087WUL8 3843 aa6.82□□□□□ -1.32
PCDHGA12-201ENST00000252085 H0YAA0 97 aa6.79□□□□□ -1.32
PCDHGA12-201ENST00000252085 P0C880 135 aa6.79□□□□□ -1.32
PCDHGA12-201ENST00000252085 BSNQ9UPA5 3926 aa6.77□□□□□ -1.33
PCDHGA12-201ENST00000252085 SVEP1Q4LDE5 3571 aa6.77□□□□□ -1.33
PCDHGA12-201ENST00000252085 XP32Q5T750 250 aa6.76□□□□□ -1.33
PCDHGA12-201ENST00000252085 ZFHX3Q15911 3703 aa6.76□□□□□ -1.33
PCDHGA12-201ENST00000252085 CUBNO60494 3623 aa6.68□□□□□ -1.34
PCDHGA12-201ENST00000252085 CSMD2Q7Z408 3487 aa6.68□□□□□ -1.34
PCDHGA12-201ENST00000252085 PP632Q6XCG6 107 aa6.65□□□□□ -1.34
PCDHGA12-201ENST00000252085 KRTAP13-3Q3SY46 172 aa6.62□□□□□ -1.35
PCDHGA12-201ENST00000252085 ANK3Q12955 4377 aaKnown RBP6.62□□□□□ -1.35
PCDHGA12-201ENST00000252085 SRRM2Q9UQ35 2752 aaKnown RBP6.6□□□□□ -1.35
PCDHGA12-201ENST00000252085 TPRXLQ17RH7 258 aa6.6□□□□□ -1.35
PCDHGA12-201ENST00000252085 A0A1B0GVY2 172 aa6.6□□□□□ -1.35
PCDHGA12-201ENST00000252085 FBN3Q75N90 2809 aa6.59□□□□□ -1.35
PCDHGA12-201ENST00000252085 TNP1P09430 55 aa6.59□□□□□ -1.35
PCDHGA12-201ENST00000252085 KRTAP10-8P60410 259 aa6.55□□□□□ -1.36
PCDHGA12-201ENST00000252085 TRRAPQ9Y4A5 3859 aa6.52□□□□□ -1.37
PCDHGA12-201ENST00000252085 MEGF8Q7Z7M0 2845 aa6.44□□□□□ -1.38
PCDHGA12-201ENST00000252085 COL7A1Q02388 2944 aa6.39□□□□□ -1.39
PCDHGA12-201ENST00000252085 VPS13CQ709C8 3753 aa6.39□□□□□ -1.39
PCDHGA12-201ENST00000252085 KRTAP3-1Q9BYR8 98 aa6.3□□□□□ -1.4
PCDHGA12-201ENST00000252085 KRTAP10-10P60014 251 aa6.27□□□□□ -1.41
PCDHGA12-201ENST00000252085 KRTAP12-2P59991 146 aa6.21□□□□□ -1.42
PCDHGA12-201ENST00000252085 ZNF469Q96JG9 3925 aaPredicted RBP6.2□□□□□ -1.42
PCDHGA12-201ENST00000252085 KRTAP15-1Q3LI76 137 aa6.18□□□□□ -1.42
PCDHGA12-201ENST00000252085 HUWE1Q7Z6Z7 4374 aaKnown RBP6.16□□□□□ -1.42
PCDHGA12-201ENST00000252085 KRTAP12-1P59990 96 aa6.12□□□□□ -1.43
PCDHGA12-201ENST00000252085 MT1HL1P0DM35 61 aa6.09□□□□□ -1.43
PCDHGA12-201ENST00000252085 KRTAP10-6P60371 365 aaPredicted RBP6.08□□□□□ -1.44
PCDHGA12-201ENST00000252085 AKAP9Q99996 3911 aa6.06□□□□□ -1.44
PCDHGA12-201ENST00000252085 KRTAP13-4Q3LI77 160 aa6.06□□□□□ -1.44
PCDHGA12-201ENST00000252085 KRTAP10-4P60372 401 aaPredicted RBP6.06□□□□□ -1.44
PCDHGA12-201ENST00000252085 PRO2289Q9P1D8 64 aa6.04□□□□□ -1.44
PCDHGA12-201ENST00000252085 INE1O15225 51 aa6.01□□□□□ -1.45
PCDHGA12-201ENST00000252085 CSMD3Q7Z407 3707 aa5.93□□□□□ -1.46
PCDHGA12-201ENST00000252085 KRTAP3-3Q9BYR6 98 aa5.93□□□□□ -1.46
PCDHGA12-201ENST00000252085 DNAH9Q9NYC9 4486 aa5.92□□□□□ -1.46
PCDHGA12-201ENST00000252085 KRTAP3-2Q9BYR7 98 aa5.9□□□□□ -1.46
PCDHGA12-201ENST00000252085 KRTAP4-5Q9BYR2 181 aa5.9□□□□□ -1.46
PCDHGA12-201ENST00000252085 DNAH5Q8TE73 4624 aa5.82□□□□□ -1.48
PCDHGA12-201ENST00000252085 PLECQ15149 4684 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms