RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 C1orf195Q5TG92 126 aa9.89□□□□□ -0.83
PCCB-201ENST00000251654 CASC2Q6XLA1 102 aa9.89□□□□□ -0.83
PCCB-201ENST00000251654 LINC00304Q8N9R0 145 aa9.89□□□□□ -0.83
PCCB-201ENST00000251654 LRP1Q07954 4544 aaKnown RBP9.88□□□□□ -0.83
PCCB-201ENST00000251654 IGHV6-1A0A0B4J1U7 121 aa9.87□□□□□ -0.83
PCCB-201ENST00000251654 C8orf17Q9NRJ1 99 aa9.86□□□□□ -0.83
PCCB-201ENST00000251654 RPS29P62273 56 aaKnown RBP9.85□□□□□ -0.83
PCCB-201ENST00000251654 SPAG11AQ6PDA7 123 aa9.84□□□□□ -0.83
PCCB-201ENST00000251654 hDV103S1A0JD37 113 aa9.84□□□□□ -0.83
PCCB-201ENST00000251654 NOTCH2NLQ7Z3S9 236 aa9.84□□□□□ -0.83
PCCB-201ENST00000251654 CYSTM1Q9H1C7 97 aa9.84□□□□□ -0.83
PCCB-201ENST00000251654 C20orf197Q8N268 126 aa9.82□□□□□ -0.84
PCCB-201ENST00000251654 TNXBP22105 4242 aa9.81□□□□□ -0.84
PCCB-201ENST00000251654 Q8N1X5 172 aa9.78□□□□□ -0.84
PCCB-201ENST00000251654 KLKP1Q107X0 134 aa9.77□□□□□ -0.84
PCCB-201ENST00000251654 MYCBP2O75592 4640 aa9.77□□□□□ -0.85
PCCB-201ENST00000251654 FAT3Q8TDW7 4589 aa9.77□□□□□ -0.85
PCCB-201ENST00000251654 TMEM254Q8TBM7 123 aa9.77□□□□□ -0.85
PCCB-201ENST00000251654 FLG2Q5D862 2391 aaPredicted RBP9.77□□□□□ -0.85
PCCB-201ENST00000251654 SNURFQ9Y675 71 aa9.75□□□□□ -0.85
PCCB-201ENST00000251654 C8orf87E5RJ46 101 aa9.74□□□□□ -0.85
PCCB-201ENST00000251654 MRPL34Q9BQ48 92 aaKnown RBP9.74□□□□□ -0.85
PCCB-201ENST00000251654 KRTAP10-8P60410 259 aa9.72□□□□□ -0.85
PCCB-201ENST00000251654 A0A0U1RQV1 116 aa9.72□□□□□ -0.85
PCCB-201ENST00000251654 C5orf47Q569G3 176 aa9.71□□□□□ -0.85
PCCB-201ENST00000251654 LINC00313P59037 77 aa9.7□□□□□ -0.86
PCCB-201ENST00000251654 H7BZZ5 65 aa9.67□□□□□ -0.86
PCCB-201ENST00000251654 TP53AIP1Q9HCN2 124 aa9.67□□□□□ -0.86
PCCB-201ENST00000251654 KRTAP16-1A8MUX0 517 aa9.66□□□□□ -0.86
PCCB-201ENST00000251654 NDUFS5O43920 106 aa9.65□□□□□ -0.86
PCCB-201ENST00000251654 ZCCHC13Q8WW36 166 aaKnown RBP9.65□□□□□ -0.86
PCCB-201ENST00000251654 TRAV22A0A0B4J277 110 aa9.63□□□□□ -0.87
PCCB-201ENST00000251654 H0Y9P7 68 aa9.63□□□□□ -0.87
PCCB-201ENST00000251654 MP68P56378 58 aa9.63□□□□□ -0.87
PCCB-201ENST00000251654 Q8N9P0 234 aaPredicted RBP9.62□□□□□ -0.87
PCCB-201ENST00000251654 NDUFC1O43677 76 aa9.61□□□□□ -0.87
PCCB-201ENST00000251654 TMEM258P61165 79 aa9.61□□□□□ -0.87
PCCB-201ENST00000251654 DMBT1Q9UGM3 2413 aaPredicted RBP9.61□□□□□ -0.87
PCCB-201ENST00000251654 RETNLBQ9BQ08 111 aa9.61□□□□□ -0.87
PCCB-201ENST00000251654 MT1HL1P0DM35 61 aa9.6□□□□□ -0.87
PCCB-201ENST00000251654 LINC00208Q96KT6 92 aa9.59□□□□□ -0.87
PCCB-201ENST00000251654 H3BPC8 53 aa9.58□□□□□ -0.88
PCCB-201ENST00000251654 KRTAP4-5Q9BYR2 181 aa9.58□□□□□ -0.88
PCCB-201ENST00000251654 KRTAP13-3Q3SY46 172 aa9.56□□□□□ -0.88
PCCB-201ENST00000251654 Q5W150 140 aa9.56□□□□□ -0.88
PCCB-201ENST00000251654 C1orf64Q8NEQ6 169 aa9.54□□□□□ -0.88
PCCB-201ENST00000251654 BIRC6Q9NR09 4857 aa9.53□□□□□ -0.88
PCCB-201ENST00000251654 FAM236DA0A1B0GTK5 79 aa9.49□□□□□ -0.89
PCCB-201ENST00000251654 FAM236CP0DP71 79 aa9.49□□□□□ -0.89
PCCB-201ENST00000251654 ABCA13Q86UQ4 5058 aa9.49□□□□□ -0.89
PCCB-201ENST00000251654 C9orf92A6NGG3 77 aa9.48□□□□□ -0.89
PCCB-201ENST00000251654 OXTP01178 125 aa9.48□□□□□ -0.89
PCCB-201ENST00000251654 HERC2O95714 4834 aa9.48□□□□□ -0.89
PCCB-201ENST00000251654 FP248Q71RG6 208 aaPredicted RBP9.44□□□□□ -0.9
PCCB-201ENST00000251654 LOC101927531A0A1B0GV80 90 aa9.42□□□□□ -0.9
PCCB-201ENST00000251654 ATP5EP56381 51 aaPredicted RBP9.42□□□□□ -0.9
PCCB-201ENST00000251654 C20orf166-AS1Q96NR2 134 aa9.42□□□□□ -0.9
PCCB-201ENST00000251654 A8MUU9 505 aa9.4□□□□□ -0.9
PCCB-201ENST00000251654 CYP4F30PQ9H0H9 118 aa9.38□□□□□ -0.91
PCCB-201ENST00000251654 PCOTHQ58A44 107 aa9.37□□□□□ -0.91
PCCB-201ENST00000251654 SPANXA2-OT1Q8N9U9 137 aa9.36□□□□□ -0.91
PCCB-201ENST00000251654 IGLV7-46A0A075B6I9 117 aa9.35□□□□□ -0.91
PCCB-201ENST00000251654 IGKV2-30P06310 120 aa9.34□□□□□ -0.91
PCCB-201ENST00000251654 RPS28P62857 69 aaKnown RBP9.33□□□□□ -0.92
PCCB-201ENST00000251654 PRR4Q16378 134 aa9.33□□□□□ -0.92
PCCB-201ENST00000251654 Q75L30 129 aa9.31□□□□□ -0.92
PCCB-201ENST00000251654 SERP1Q9Y6X1 66 aa9.31□□□□□ -0.92
PCCB-201ENST00000251654 IGKV2D-30A0A075B6S6 120 aa9.26□□□□□ -0.93
PCCB-201ENST00000251654 XP32Q5T750 250 aa9.25□□□□□ -0.93
PCCB-201ENST00000251654 HRES1P13985 223 aa9.22□□□□□ -0.93
PCCB-201ENST00000251654 C7orf65Q6ZTY9 151 aa9.21□□□□□ -0.93
PCCB-201ENST00000251654 RPL37P61927 97 aaKnown RBP9.2□□□□□ -0.94
PCCB-201ENST00000251654 TPRXLQ17RH7 258 aa9.19□□□□□ -0.94
PCCB-201ENST00000251654 J3QL48 77 aa9.19□□□□□ -0.94
PCCB-201ENST00000251654 LPAP08519 4548 aa9.17□□□□□ -0.94
PCCB-201ENST00000251654 LRP2P98164 4655 aa9.16□□□□□ -0.94
PCCB-201ENST00000251654 PCLOQ9Y6V0 5065 aa9.15□□□□□ -0.94
PCCB-201ENST00000251654 ATP11AUNQ6ZP68 121 aa9.14□□□□□ -0.95
PCCB-201ENST00000251654 SPINK7P58062 85 aa9.12□□□□□ -0.95
PCCB-201ENST00000251654 DMAC1Q96GE9 116 aa9.11□□□□□ -0.95
PCCB-201ENST00000251654 COA5Q86WW8 74 aa9.09□□□□□ -0.95
PCCB-201ENST00000251654 SMIM26A0A096LP01 95 aa9.07□□□□□ -0.96
PCCB-201ENST00000251654 C4orf26Q17RF5 130 aa9.04□□□□□ -0.96
PCCB-201ENST00000251654 ACYP2P14621 99 aa9.03□□□□□ -0.96
PCCB-201ENST00000251654 HERC1Q15751 4861 aa9□□□□□ -0.97
PCCB-201ENST00000251654 A8MUN3 132 aa8.95□□□□□ -0.98
PCCB-201ENST00000251654 KRTAP3-1Q9BYR8 98 aa8.95□□□□□ -0.98
PCCB-201ENST00000251654 MPLKIPQ8TAP9 179 aa8.92□□□□□ -0.98
PCCB-201ENST00000251654 Q1T7F1 81 aa8.89□□□□□ -0.99
PCCB-201ENST00000251654 COX6B2Q6YFQ2 88 aa8.89□□□□□ -0.99
PCCB-201ENST00000251654 CHKB-CPT1BH3BT56 60 aa8.87□□□□□ -0.99
PCCB-201ENST00000251654 HMCN2Q8NDA2 5059 aa8.87□□□□□ -0.99
PCCB-201ENST00000251654 SEC61BP60468 96 aaKnown RBP8.82□□□□□ -1
PCCB-201ENST00000251654 V9GYY9 64 aa8.8□□□□□ -1
PCCB-201ENST00000251654 MUC17Q685J3 4493 aa8.78□□□□□ -1
PCCB-201ENST00000251654 LINC01558Q9Y6Z2 57 aa8.75□□□□□ -1.01
PCCB-201ENST00000251654 PSPHP1O15172 72 aa8.73□□□□□ -1.01
PCCB-201ENST00000251654 KRTAP4-1Q9BYQ7 146 aa8.71□□□□□ -1.01
PCCB-201ENST00000251654 PRR15LQ9BU68 103 aa8.69□□□□□ -1.02
PCCB-201ENST00000251654 Q5VV11 94 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 1934.8 ms