RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 TP53AIP1Q9HCN2 124 aa14.67□□□□□ -0.06
TMEM55B-201ENST00000250489 KRTAP1-4P0C5Y4 121 aa14.66□□□□□ -0.06
TMEM55B-201ENST00000250489 SVIPQ8NHG7 77 aa14.66□□□□□ -0.06
TMEM55B-201ENST00000250489 MRPL34Q9BQ48 92 aaKnown RBP14.64□□□□□ -0.07
TMEM55B-201ENST00000250489 C1orf64Q8NEQ6 169 aa14.64□□□□□ -0.07
TMEM55B-201ENST00000250489 SMIM26A0A096LP01 95 aa14.63□□□□□ -0.07
TMEM55B-201ENST00000250489 LINC00336Q6ZUF6 198 aa14.6□□□□□ -0.07
TMEM55B-201ENST00000250489 VPS13BQ7Z7G8 4022 aa14.59□□□□□ -0.07
TMEM55B-201ENST00000250489 NDUFS5O43920 106 aa14.58□□□□□ -0.07
TMEM55B-201ENST00000250489 CYP4F30PQ9H0H9 118 aa14.58□□□□□ -0.07
TMEM55B-201ENST00000250489 FP248Q71RG6 208 aaPredicted RBP14.57□□□□□ -0.08
TMEM55B-201ENST00000250489 C4orf26Q17RF5 130 aa14.56□□□□□ -0.08
TMEM55B-201ENST00000250489 PRR4Q16378 134 aa14.54□□□□□ -0.08
TMEM55B-201ENST00000250489 PKHD1P08F94 4074 aa14.52□□□□□ -0.08
TMEM55B-201ENST00000250489 SPANXA2-OT1Q8N9U9 137 aa14.52□□□□□ -0.09
TMEM55B-201ENST00000250489 C8orf87E5RJ46 101 aa14.51□□□□□ -0.09
TMEM55B-201ENST00000250489 C1orf195Q5TG92 126 aa14.5□□□□□ -0.09
TMEM55B-201ENST00000250489 PLA2G1BP04054 148 aaKnown RBP14.49□□□□□ -0.09
TMEM55B-201ENST00000250489 A0A1B0GVY2 172 aa14.49□□□□□ -0.09
TMEM55B-201ENST00000250489 DYNC1H1Q14204 4646 aaKnown RBP14.46□□□□□ -0.09
TMEM55B-201ENST00000250489 LIMD2Q9BT23 127 aa14.44□□□□□ -0.1
TMEM55B-201ENST00000250489 TYMSOSQ8TAI1 123 aa14.43□□□□□ -0.1
TMEM55B-201ENST00000250489 LINC00313P59037 77 aa14.4□□□□□ -0.1
TMEM55B-201ENST00000250489 PCOTHQ58A44 107 aa14.38□□□□□ -0.11
TMEM55B-201ENST00000250489 SMR3BP02814 79 aaPredicted RBP14.37□□□□□ -0.11
TMEM55B-201ENST00000250489 C4orf48Q5BLP8 95 aa14.37□□□□□ -0.11
TMEM55B-201ENST00000250489 KRTAP13-3Q3SY46 172 aa14.36□□□□□ -0.11
TMEM55B-201ENST00000250489 Q5W150 140 aa14.36□□□□□ -0.11
TMEM55B-201ENST00000250489 IGLV7-46A0A075B6I9 117 aa14.35□□□□□ -0.11
TMEM55B-201ENST00000250489 RYR2Q92736 4967 aa14.34□□□□□ -0.11
TMEM55B-201ENST00000250489 SPINK1P00995 79 aa14.33□□□□□ -0.12
TMEM55B-201ENST00000250489 MPLKIPQ8TAP9 179 aa14.33□□□□□ -0.12
TMEM55B-201ENST00000250489 PRR26Q8N8Z3 221 aa14.31□□□□□ -0.12
TMEM55B-201ENST00000250489 Q8N9P0 234 aaPredicted RBP14.29□□□□□ -0.12
TMEM55B-201ENST00000250489 APOBP04114 4563 aaKnown RBP14.29□□□□□ -0.12
TMEM55B-201ENST00000250489 LOC101927531A0A1B0GV80 90 aa14.29□□□□□ -0.12
TMEM55B-201ENST00000250489 KRTAP16-1A8MUX0 517 aa14.27□□□□□ -0.13
TMEM55B-201ENST00000250489 KRTAP10-4P60372 401 aaPredicted RBP14.25□□□□□ -0.13
TMEM55B-201ENST00000250489 LINC00304Q8N9R0 145 aa14.25□□□□□ -0.13
TMEM55B-201ENST00000250489 RPS29P62273 56 aaKnown RBP14.21□□□□□ -0.13
TMEM55B-201ENST00000250489 FAM229AH3BQW9 127 aa14.2□□□□□ -0.14
TMEM55B-201ENST00000250489 Q1T7F1 81 aa14.2□□□□□ -0.14
TMEM55B-201ENST00000250489 SPAG11AQ6PDA7 123 aa14.18□□□□□ -0.14
TMEM55B-201ENST00000250489 FAT1Q14517 4588 aa14.16□□□□□ -0.14
TMEM55B-201ENST00000250489 COA5Q86WW8 74 aa14.16□□□□□ -0.14
TMEM55B-201ENST00000250489 KMT2CQ8NEZ4 4911 aaKnown RBP14.14□□□□□ -0.15
TMEM55B-201ENST00000250489 RETNLBQ9BQ08 111 aa14.13□□□□□ -0.15
TMEM55B-201ENST00000250489 PKHD1L1Q86WI1 4243 aa14.06□□□□□ -0.16
TMEM55B-201ENST00000250489 IGKV2-30P06310 120 aa14.05□□□□□ -0.16
TMEM55B-201ENST00000250489 V9GYY9 64 aa14.03□□□□□ -0.16
TMEM55B-201ENST00000250489 HRES1P13985 223 aa14.02□□□□□ -0.16
TMEM55B-201ENST00000250489 PSPHP1O15172 72 aa13.97□□□□□ -0.17
TMEM55B-201ENST00000250489 A8MUN3 132 aa13.91□□□□□ -0.18
TMEM55B-201ENST00000250489 DMAC1Q96GE9 116 aa13.89□□□□□ -0.19
TMEM55B-201ENST00000250489 IGKV2D-30A0A075B6S6 120 aa13.88□□□□□ -0.19
TMEM55B-201ENST00000250489 BRK1Q8WUW1 75 aa13.87□□□□□ -0.19
TMEM55B-201ENST00000250489 RYR3Q15413 4870 aa13.87□□□□□ -0.19
TMEM55B-201ENST00000250489 ACYP2P14621 99 aa13.87□□□□□ -0.19
TMEM55B-201ENST00000250489 PRO0628Q9UI54 55 aa13.87□□□□□ -0.19
TMEM55B-201ENST00000250489 Q5VV11 94 aa13.83□□□□□ -0.2
TMEM55B-201ENST00000250489 PRR15LQ9BU68 103 aa13.81□□□□□ -0.2
TMEM55B-201ENST00000250489 C9orf92A6NGG3 77 aa13.8□□□□□ -0.2
TMEM55B-201ENST00000250489 Q5VSD8 79 aa13.77□□□□□ -0.21
TMEM55B-201ENST00000250489 C20orf166-AS1Q96NR2 134 aa13.76□□□□□ -0.21
TMEM55B-201ENST00000250489 LINC01558Q9Y6Z2 57 aa13.76□□□□□ -0.21
TMEM55B-201ENST00000250489 A8MUU9 505 aa13.76□□□□□ -0.21
TMEM55B-201ENST00000250489 HSPG2P98160 4391 aa13.75□□□□□ -0.21
TMEM55B-201ENST00000250489 C7orf65Q6ZTY9 151 aa13.72□□□□□ -0.21
TMEM55B-201ENST00000250489 Q8N1X5 172 aa13.71□□□□□ -0.21
TMEM55B-201ENST00000250489 KRTAP10-8P60410 259 aa13.7□□□□□ -0.22
TMEM55B-201ENST00000250489 CHKB-CPT1BH3BT56 60 aa13.69□□□□□ -0.22
TMEM55B-201ENST00000250489 Q75L30 129 aa13.68□□□□□ -0.22
TMEM55B-201ENST00000250489 FLG2Q5D862 2391 aaPredicted RBP13.67□□□□□ -0.22
TMEM55B-201ENST00000250489 RYR1P21817 5038 aa13.66□□□□□ -0.22
TMEM55B-201ENST00000250489 TNXBP22105 4242 aa13.65□□□□□ -0.22
TMEM55B-201ENST00000250489 LRP1Q07954 4544 aaKnown RBP13.62□□□□□ -0.23
TMEM55B-201ENST00000250489 KRTAP17-1Q9BYP8 105 aa13.59□□□□□ -0.23
TMEM55B-201ENST00000250489 FAT3Q8TDW7 4589 aa13.59□□□□□ -0.23
TMEM55B-201ENST00000250489 A6NED7 52 aa13.49□□□□□ -0.25
TMEM55B-201ENST00000250489 A8MU10 97 aa13.47□□□□□ -0.25
TMEM55B-201ENST00000250489 SPINK7P58062 85 aa13.43□□□□□ -0.26
TMEM55B-201ENST00000250489 KIAA1109Q2LD37 5005 aa13.43□□□□□ -0.26
TMEM55B-201ENST00000250489 LCA10Q71F78 164 aa13.41□□□□□ -0.26
TMEM55B-201ENST00000250489 EPPK1P58107 5090 aaKnown RBP13.39□□□□□ -0.27
TMEM55B-201ENST00000250489 MT1HL1P0DM35 61 aa13.36□□□□□ -0.27
TMEM55B-201ENST00000250489 A0A1B0GU69 56 aa13.34□□□□□ -0.27
TMEM55B-201ENST00000250489 CDC42SE1Q9NRR8 79 aa13.34□□□□□ -0.27
TMEM55B-201ENST00000250489 KRTAP3-1Q9BYR8 98 aa13.32□□□□□ -0.28
TMEM55B-201ENST00000250489 ATP11AUNQ6ZP68 121 aa13.28□□□□□ -0.28
TMEM55B-201ENST00000250489 RPL37P61927 97 aaKnown RBP13.27□□□□□ -0.28
TMEM55B-201ENST00000250489 DMBT1Q9UGM3 2413 aaPredicted RBP13.27□□□□□ -0.29
TMEM55B-201ENST00000250489 XP32Q5T750 250 aa13.25□□□□□ -0.29
TMEM55B-201ENST00000250489 MYCBP2O75592 4640 aa13.22□□□□□ -0.29
TMEM55B-201ENST00000250489 COX6B2Q6YFQ2 88 aa13.19□□□□□ -0.3
TMEM55B-201ENST00000250489 SPTSSBQ8NFR3 76 aa13.19□□□□□ -0.3
TMEM55B-201ENST00000250489 PMAIP1Q13794 54 aa13.11□□□□□ -0.31
TMEM55B-201ENST00000250489 UQCR11O14957 56 aa13.05□□□□□ -0.32
TMEM55B-201ENST00000250489 SEC61GP60059 68 aa13.03□□□□□ -0.32
TMEM55B-201ENST00000250489 SPATA8Q6RVD6 105 aa13.03□□□□□ -0.32
TMEM55B-201ENST00000250489 KRTAP4-5Q9BYR2 181 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms