RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 DEFB116Q30KQ4 102 aa6.68□□□□□ -1.34
VPREB3-201ENST00000248948 A0A1B0GVX0 72 aa6.67□□□□□ -1.34
VPREB3-201ENST00000248948 C14orf132Q9NPU4 83 aa6.67□□□□□ -1.34
VPREB3-201ENST00000248948 IGHV6-1A0A0B4J1U7 121 aa6.66□□□□□ -1.34
VPREB3-201ENST00000248948 MT1HP80294 61 aa6.65□□□□□ -1.34
VPREB3-201ENST00000248948 COX6B2Q6YFQ2 88 aa6.64□□□□□ -1.35
VPREB3-201ENST00000248948 NOTCH2NLQ7Z3S9 236 aa6.63□□□□□ -1.35
VPREB3-201ENST00000248948 NDUFB1O75438 58 aa6.61□□□□□ -1.35
VPREB3-201ENST00000248948 SPCS1Q9Y6A9 102 aa6.61□□□□□ -1.35
VPREB3-201ENST00000248948 A8MWP4 228 aa6.6□□□□□ -1.35
VPREB3-201ENST00000248948 COL5A1-AS1Q5SY13 56 aa6.6□□□□□ -1.35
VPREB3-201ENST00000248948 MTURNQ8N3F0 131 aa6.6□□□□□ -1.35
VPREB3-201ENST00000248948 KRTAP9-2Q9BYQ4 174 aa6.6□□□□□ -1.35
VPREB3-201ENST00000248948 FLGP20930 4061 aaPredicted RBP6.6□□□□□ -1.35
VPREB3-201ENST00000248948 NREPQ16612 68 aa6.56□□□□□ -1.36
VPREB3-201ENST00000248948 IGKV3D-7A0A0C4DH55 119 aa6.55□□□□□ -1.36
VPREB3-201ENST00000248948 C8orf17Q9NRJ1 99 aa6.55□□□□□ -1.36
VPREB3-201ENST00000248948 Q8N9P0 234 aaPredicted RBP6.54□□□□□ -1.36
VPREB3-201ENST00000248948 K7EP34 96 aa6.53□□□□□ -1.36
VPREB3-201ENST00000248948 M0R2T5 61 aa6.53□□□□□ -1.36
VPREB3-201ENST00000248948 PRR15Q8IV56 129 aa6.53□□□□□ -1.36
VPREB3-201ENST00000248948 ZCCHC13Q8WW36 166 aaKnown RBP6.52□□□□□ -1.37
VPREB3-201ENST00000248948 KRTAP9-6A0A140TA67 174 aa6.51□□□□□ -1.37
VPREB3-201ENST00000248948 LORP23490 312 aaPredicted RBP6.51□□□□□ -1.37
VPREB3-201ENST00000248948 SMCPP49901 116 aaPredicted RBP6.51□□□□□ -1.37
VPREB3-201ENST00000248948 KRTAP10-6P60371 365 aaPredicted RBP6.51□□□□□ -1.37
VPREB3-201ENST00000248948 PCP4L1A6NKN8 68 aa6.5□□□□□ -1.37
VPREB3-201ENST00000248948 PRO0461Q9UI25 63 aa6.5□□□□□ -1.37
VPREB3-201ENST00000248948 MMP24-AS1A0A0U1RRL7 71 aa6.49□□□□□ -1.37
VPREB3-201ENST00000248948 LCE2DQ5TA82 110 aaPredicted RBP6.49□□□□□ -1.37
VPREB3-201ENST00000248948 Q6ZVQ6 151 aa6.49□□□□□ -1.37
VPREB3-201ENST00000248948 K7EQZ3 153 aa6.48□□□□□ -1.37
VPREB3-201ENST00000248948 HRES1P13985 223 aa6.48□□□□□ -1.37
VPREB3-201ENST00000248948 MPLKIPQ8TAP9 179 aa6.48□□□□□ -1.37
VPREB3-201ENST00000248948 TMEM254Q8TBM7 123 aa6.48□□□□□ -1.37
VPREB3-201ENST00000248948 BPY2O14599 106 aa6.47□□□□□ -1.37
VPREB3-201ENST00000248948 RBM12B-AS1Q9P1G2 102 aa6.47□□□□□ -1.37
VPREB3-201ENST00000248948 GTF2H5Q6ZYL4 71 aa6.46□□□□□ -1.38
VPREB3-201ENST00000248948 MRPL34Q9BQ48 92 aaKnown RBP6.46□□□□□ -1.38
VPREB3-201ENST00000248948 FAM236DA0A1B0GTK5 79 aa6.44□□□□□ -1.38
VPREB3-201ENST00000248948 FAM236CP0DP71 79 aa6.44□□□□□ -1.38
VPREB3-201ENST00000248948 hDV103S1A0JD37 113 aa6.43□□□□□ -1.38
VPREB3-201ENST00000248948 SPINK7P58062 85 aa6.42□□□□□ -1.38
VPREB3-201ENST00000248948 UBL5Q9BZL1 73 aa6.42□□□□□ -1.38
VPREB3-201ENST00000248948 F8W1H4 67 aa6.4□□□□□ -1.38
VPREB3-201ENST00000248948 LINC00846Q9NV44 126 aa6.4□□□□□ -1.38
VPREB3-201ENST00000248948 NDUFS5O43920 106 aa6.37□□□□□ -1.39
VPREB3-201ENST00000248948 Q8N9L7 120 aa6.37□□□□□ -1.39
VPREB3-201ENST00000248948 FSIP2Q5CZC0 6907 aa6.36□□□□□ -1.39
VPREB3-201ENST00000248948 CASC2Q6XLA1 102 aa6.36□□□□□ -1.39
VPREB3-201ENST00000248948 WFDC13Q8IUB5 93 aa6.36□□□□□ -1.39
VPREB3-201ENST00000248948 ETDBQ3ZM63 59 aa6.34□□□□□ -1.39
VPREB3-201ENST00000248948 HCG22E2RYF7 251 aa6.31□□□□□ -1.4
VPREB3-201ENST00000248948 CXCL6P80162 114 aa6.3□□□□□ -1.4
VPREB3-201ENST00000248948 C7orf65Q6ZTY9 151 aa6.3□□□□□ -1.4
VPREB3-201ENST00000248948 KRTAP9-8Q9BYQ0 159 aa6.3□□□□□ -1.4
VPREB3-201ENST00000248948 Q5W150 140 aa6.27□□□□□ -1.41
VPREB3-201ENST00000248948 IGKV2D-30A0A075B6S6 120 aa6.25□□□□□ -1.41
VPREB3-201ENST00000248948 FAM240AA0A1B0GVK7 77 aa6.25□□□□□ -1.41
VPREB3-201ENST00000248948 IGKV2-30P06310 120 aa6.25□□□□□ -1.41
VPREB3-201ENST00000248948 CRCT1Q9UGL9 99 aa6.25□□□□□ -1.41
VPREB3-201ENST00000248948 ACYP1P07311 99 aa6.24□□□□□ -1.41
VPREB3-201ENST00000248948 MT2AP02795 61 aa6.23□□□□□ -1.41
VPREB3-201ENST00000248948 ATP5EP2Q5VTU8 51 aa6.21□□□□□ -1.42
VPREB3-201ENST00000248948 TP53AIP1Q9HCN2 124 aa6.21□□□□□ -1.42
VPREB3-201ENST00000248948 H1FX-AS1Q4G0G2 97 aa6.19□□□□□ -1.42
VPREB3-201ENST00000248948 MT1FP04733 61 aa6.18□□□□□ -1.42
VPREB3-201ENST00000248948 USH2AO75445 5202 aa6.13□□□□□ -1.43
VPREB3-201ENST00000248948 A0A1B0GV90 55 aa6.13□□□□□ -1.43
VPREB3-201ENST00000248948 KRTAP10-10P60014 251 aa6.13□□□□□ -1.43
VPREB3-201ENST00000248948 C4orf26Q17RF5 130 aa6.12□□□□□ -1.43
VPREB3-201ENST00000248948 KRTAP9-3Q9BYQ3 159 aa6.1□□□□□ -1.43
VPREB3-201ENST00000248948 TRAV22A0A0B4J277 110 aa6.09□□□□□ -1.43
VPREB3-201ENST00000248948 HIST1H4AP62805 103 aaKnown RBP6.08□□□□□ -1.44
VPREB3-201ENST00000248948 LINC00643Q86TS7 51 aa6.08□□□□□ -1.44
VPREB3-201ENST00000248948 SSPOA2VEC9 5147 aa6.07□□□□□ -1.44
VPREB3-201ENST00000248948 LOC101927531A0A1B0GV80 90 aa6.04□□□□□ -1.44
VPREB3-201ENST00000248948 LCE2BO14633 110 aa6.04□□□□□ -1.44
VPREB3-201ENST00000248948 UQCRQO14949 82 aa6.03□□□□□ -1.44
VPREB3-201ENST00000248948 C1orf64Q8NEQ6 169 aa6.03□□□□□ -1.44
VPREB3-201ENST00000248948 KRTAP3-1Q9BYR8 98 aa6.03□□□□□ -1.44
VPREB3-201ENST00000248948 CYP4F30PQ9H0H9 118 aa6.03□□□□□ -1.44
VPREB3-201ENST00000248948 J3QR89 54 aa6.01□□□□□ -1.45
VPREB3-201ENST00000248948 ATOX1O00244 68 aa6.01□□□□□ -1.45
VPREB3-201ENST00000248948 S4R3F8 94 aa6.01□□□□□ -1.45
VPREB3-201ENST00000248948 A0A087WVE0 104 aa6□□□□□ -1.45
VPREB3-201ENST00000248948 H0Y9P7 68 aa5.98□□□□□ -1.45
VPREB3-201ENST00000248948 C5orf47Q569G3 176 aa5.96□□□□□ -1.46
VPREB3-201ENST00000248948 LCA10Q71F78 164 aa5.96□□□□□ -1.46
VPREB3-201ENST00000248948 CSAG1Q6PB30 78 aa5.94□□□□□ -1.46
VPREB3-201ENST00000248948 OCR1Q9BZK8 76 aa5.92□□□□□ -1.46
VPREB3-201ENST00000248948 KRTAP19-1Q8IUB9 90 aa5.9□□□□□ -1.46
VPREB3-201ENST00000248948 MP68P56378 58 aa5.89□□□□□ -1.47
VPREB3-201ENST00000248948 FCGBPQ9Y6R7 5405 aaPredicted RBP5.89□□□□□ -1.47
VPREB3-201ENST00000248948 FAM236AA0A1B0GUQ0 79 aa5.88□□□□□ -1.47
VPREB3-201ENST00000248948 FAM236BA0A1B0GV22 79 aa5.88□□□□□ -1.47
VPREB3-201ENST00000248948 A8MUN3 132 aa5.87□□□□□ -1.47
VPREB3-201ENST00000248948 LINC00208Q96KT6 92 aa5.87□□□□□ -1.47
VPREB3-201ENST00000248948 KRTAP3-3Q9BYR6 98 aa5.87□□□□□ -1.47
VPREB3-201ENST00000248948 KRTAP19-6Q3LI70 58 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms