RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 KRTAP29-1A8MX34 341 aaPredicted RBP8.11□□□□□ -1.11
SDF2-201ENST00000247020 UQCRQO14949 82 aa8.11□□□□□ -1.11
SDF2-201ENST00000247020 CASC2Q6XLA1 102 aa8.1□□□□□ -1.11
SDF2-201ENST00000247020 C8orf87E5RJ46 101 aa8.1□□□□□ -1.11
SDF2-201ENST00000247020 C8orf17Q9NRJ1 99 aa8.1□□□□□ -1.11
SDF2-201ENST00000247020 IGHV6-1A0A0B4J1U7 121 aa8.09□□□□□ -1.11
SDF2-201ENST00000247020 KRTAP10-8P60410 259 aa8.09□□□□□ -1.11
SDF2-201ENST00000247020 EPPK1P58107 5090 aaKnown RBP8.08□□□□□ -1.12
SDF2-201ENST00000247020 hDV103S1A0JD37 113 aa8.08□□□□□ -1.12
SDF2-201ENST00000247020 WFDC13Q8IUB5 93 aa8.08□□□□□ -1.12
SDF2-201ENST00000247020 KRTAP17-1Q9BYP8 105 aa8.08□□□□□ -1.12
SDF2-201ENST00000247020 OCR1Q9BZK8 76 aa8.08□□□□□ -1.12
SDF2-201ENST00000247020 TMEM254Q8TBM7 123 aa8.05□□□□□ -1.12
SDF2-201ENST00000247020 KIAA1109Q2LD37 5005 aa8.04□□□□□ -1.12
SDF2-201ENST00000247020 CCDC179H3BU77 68 aa8.03□□□□□ -1.12
SDF2-201ENST00000247020 MRPL34Q9BQ48 92 aaKnown RBP8.01□□□□□ -1.13
SDF2-201ENST00000247020 LINC00313P59037 77 aa8.01□□□□□ -1.13
SDF2-201ENST00000247020 OXTP01178 125 aa8□□□□□ -1.13
SDF2-201ENST00000247020 TP53AIP1Q9HCN2 124 aa8□□□□□ -1.13
SDF2-201ENST00000247020 NOTCH2NLQ7Z3S9 236 aa7.98□□□□□ -1.13
SDF2-201ENST00000247020 FAT3Q8TDW7 4589 aa7.98□□□□□ -1.13
SDF2-201ENST00000247020 C5orf47Q569G3 176 aa7.97□□□□□ -1.13
SDF2-201ENST00000247020 TNXBP22105 4242 aa7.97□□□□□ -1.13
SDF2-201ENST00000247020 KLKP1Q107X0 134 aa7.96□□□□□ -1.14
SDF2-201ENST00000247020 FLG2Q5D862 2391 aaPredicted RBP7.94□□□□□ -1.14
SDF2-201ENST00000247020 MT1HL1P0DM35 61 aa7.94□□□□□ -1.14
SDF2-201ENST00000247020 C20orf197Q8N268 126 aa7.94□□□□□ -1.14
SDF2-201ENST00000247020 LRP1Q07954 4544 aaKnown RBP7.94□□□□□ -1.14
SDF2-201ENST00000247020 H3BPC8 53 aa7.93□□□□□ -1.14
SDF2-201ENST00000247020 Q8N9P0 234 aaPredicted RBP7.93□□□□□ -1.14
SDF2-201ENST00000247020 KRTAP16-1A8MUX0 517 aa7.92□□□□□ -1.14
SDF2-201ENST00000247020 MP68P56378 58 aa7.91□□□□□ -1.14
SDF2-201ENST00000247020 FP248Q71RG6 208 aaPredicted RBP7.91□□□□□ -1.14
SDF2-201ENST00000247020 A0A0U1RQV1 116 aa7.9□□□□□ -1.14
SDF2-201ENST00000247020 NDUFS5O43920 106 aa7.9□□□□□ -1.14
SDF2-201ENST00000247020 TRAV22A0A0B4J277 110 aa7.89□□□□□ -1.15
SDF2-201ENST00000247020 NDUFC1O43677 76 aa7.88□□□□□ -1.15
SDF2-201ENST00000247020 H0Y9P7 68 aa7.88□□□□□ -1.15
SDF2-201ENST00000247020 KRTAP4-5Q9BYR2 181 aa7.88□□□□□ -1.15
SDF2-201ENST00000247020 RETNLBQ9BQ08 111 aa7.86□□□□□ -1.15
SDF2-201ENST00000247020 SNURFQ9Y675 71 aa7.86□□□□□ -1.15
SDF2-201ENST00000247020 BIRC6Q9NR09 4857 aa7.85□□□□□ -1.15
SDF2-201ENST00000247020 ZCCHC13Q8WW36 166 aaKnown RBP7.85□□□□□ -1.15
SDF2-201ENST00000247020 CYSTM1Q9H1C7 97 aa7.84□□□□□ -1.15
SDF2-201ENST00000247020 TMEM258P61165 79 aa7.82□□□□□ -1.16
SDF2-201ENST00000247020 H7BZZ5 65 aa7.81□□□□□ -1.16
SDF2-201ENST00000247020 LINC00208Q96KT6 92 aa7.81□□□□□ -1.16
SDF2-201ENST00000247020 MYCBP2O75592 4640 aa7.81□□□□□ -1.16
SDF2-201ENST00000247020 KRTAP13-3Q3SY46 172 aa7.8□□□□□ -1.16
SDF2-201ENST00000247020 C20orf166-AS1Q96NR2 134 aa7.8□□□□□ -1.16
SDF2-201ENST00000247020 LOC100996750A0A140TA64 210 aa7.79□□□□□ -1.16
SDF2-201ENST00000247020 C1orf64Q8NEQ6 169 aa7.79□□□□□ -1.16
SDF2-201ENST00000247020 KRTAP4-6Q9BYQ5 205 aa7.79□□□□□ -1.16
SDF2-201ENST00000247020 A8MUU9 505 aa7.78□□□□□ -1.16
SDF2-201ENST00000247020 HERC2O95714 4834 aa7.77□□□□□ -1.16
SDF2-201ENST00000247020 C9orf92A6NGG3 77 aa7.77□□□□□ -1.17
SDF2-201ENST00000247020 DMBT1Q9UGM3 2413 aaPredicted RBP7.77□□□□□ -1.17
SDF2-201ENST00000247020 IGLV7-46A0A075B6I9 117 aa7.76□□□□□ -1.17
SDF2-201ENST00000247020 LOC101927531A0A1B0GV80 90 aa7.76□□□□□ -1.17
SDF2-201ENST00000247020 Q5W150 140 aa7.76□□□□□ -1.17
SDF2-201ENST00000247020 ATP5EP56381 51 aaPredicted RBP7.74□□□□□ -1.17
SDF2-201ENST00000247020 Q75L30 129 aa7.73□□□□□ -1.17
SDF2-201ENST00000247020 FAM236DA0A1B0GTK5 79 aa7.7□□□□□ -1.18
SDF2-201ENST00000247020 J3QL48 77 aa7.7□□□□□ -1.18
SDF2-201ENST00000247020 FAM236CP0DP71 79 aa7.7□□□□□ -1.18
SDF2-201ENST00000247020 SPANXA2-OT1Q8N9U9 137 aa7.69□□□□□ -1.18
SDF2-201ENST00000247020 IGKV2-30P06310 120 aa7.67□□□□□ -1.18
SDF2-201ENST00000247020 PRR4Q16378 134 aa7.67□□□□□ -1.18
SDF2-201ENST00000247020 TPRXLQ17RH7 258 aa7.67□□□□□ -1.18
SDF2-201ENST00000247020 CYP4F30PQ9H0H9 118 aa7.67□□□□□ -1.18
SDF2-201ENST00000247020 ABCA13Q86UQ4 5058 aa7.65□□□□□ -1.18
SDF2-201ENST00000247020 XP32Q5T750 250 aa7.64□□□□□ -1.19
SDF2-201ENST00000247020 RPL37P61927 97 aaKnown RBP7.63□□□□□ -1.19
SDF2-201ENST00000247020 PCOTHQ58A44 107 aa7.61□□□□□ -1.19
SDF2-201ENST00000247020 C7orf65Q6ZTY9 151 aa7.61□□□□□ -1.19
SDF2-201ENST00000247020 ATP11AUNQ6ZP68 121 aa7.59□□□□□ -1.19
SDF2-201ENST00000247020 IGKV2D-30A0A075B6S6 120 aa7.58□□□□□ -1.2
SDF2-201ENST00000247020 RPS28P62857 69 aaKnown RBP7.58□□□□□ -1.2
SDF2-201ENST00000247020 SERP1Q9Y6X1 66 aa7.56□□□□□ -1.2
SDF2-201ENST00000247020 HRES1P13985 223 aa7.53□□□□□ -1.2
SDF2-201ENST00000247020 LCE2BO14633 110 aa7.52□□□□□ -1.21
SDF2-201ENST00000247020 SPINK7P58062 85 aa7.49□□□□□ -1.21
SDF2-201ENST00000247020 DMAC1Q96GE9 116 aa7.46□□□□□ -1.21
SDF2-201ENST00000247020 A8MUN3 132 aa7.43□□□□□ -1.22
SDF2-201ENST00000247020 ACYP2P14621 99 aa7.43□□□□□ -1.22
SDF2-201ENST00000247020 SEC61BP60468 96 aaKnown RBP7.4□□□□□ -1.22
SDF2-201ENST00000247020 COA5Q86WW8 74 aa7.4□□□□□ -1.22
SDF2-201ENST00000247020 C4orf26Q17RF5 130 aa7.37□□□□□ -1.23
SDF2-201ENST00000247020 SMIM26A0A096LP01 95 aa7.36□□□□□ -1.23
SDF2-201ENST00000247020 LPAP08519 4548 aa7.35□□□□□ -1.23
SDF2-201ENST00000247020 PCLOQ9Y6V0 5065 aa7.34□□□□□ -1.23
SDF2-201ENST00000247020 COX6B2Q6YFQ2 88 aa7.34□□□□□ -1.23
SDF2-201ENST00000247020 LRP2P98164 4655 aa7.34□□□□□ -1.23
SDF2-201ENST00000247020 CHKB-CPT1BH3BT56 60 aa7.29□□□□□ -1.24
SDF2-201ENST00000247020 KRTAP3-1Q9BYR8 98 aa7.28□□□□□ -1.24
SDF2-201ENST00000247020 MPLKIPQ8TAP9 179 aa7.27□□□□□ -1.25
SDF2-201ENST00000247020 MUC17Q685J3 4493 aa7.25□□□□□ -1.25
SDF2-201ENST00000247020 V9GYY9 64 aa7.25□□□□□ -1.25
SDF2-201ENST00000247020 Q1T7F1 81 aa7.23□□□□□ -1.25
SDF2-201ENST00000247020 RBM12B-AS1Q9P1G2 102 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms