RNA–Protein interactions for RNA: ENST00000247005.7

GDF1-201, Transcript of growth differentiation factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1-201ENST00000247005 TRAV22A0A0B4J277 110 aa14.18□□□□□ -0.14
GDF1-201ENST00000247005 C8orf17Q9NRJ1 99 aa14.17□□□□□ -0.14
GDF1-201ENST00000247005 A0A087X002 238 aa14.16□□□□□ -0.14
GDF1-201ENST00000247005 PSPHP1O15172 72 aa14.16□□□□□ -0.14
GDF1-201ENST00000247005 NOTCH2NLQ7Z3S9 236 aa14.16□□□□□ -0.14
GDF1-201ENST00000247005 SPINK6Q6UWN8 80 aa14.16□□□□□ -0.14
GDF1-201ENST00000247005 A0A1B0GVX0 72 aa14.15□□□□□ -0.14
GDF1-201ENST00000247005 CDK2AP2O75956 126 aa14.12□□□□□ -0.15
GDF1-201ENST00000247005 ASB16-AS1Q495Z4 193 aa14.12□□□□□ -0.15
GDF1-201ENST00000247005 VPS13BQ7Z7G8 4022 aa14.09□□□□□ -0.15
GDF1-201ENST00000247005 NDUFS5O43920 106 aa14.08□□□□□ -0.15
GDF1-201ENST00000247005 Q6ZSA8 131 aa14.08□□□□□ -0.15
GDF1-201ENST00000247005 H3BPC8 53 aa14.04□□□□□ -0.16
GDF1-201ENST00000247005 PKHD1P08F94 4074 aa14.02□□□□□ -0.16
GDF1-201ENST00000247005 CYP4F30PQ9H0H9 118 aa14.02□□□□□ -0.16
GDF1-201ENST00000247005 A8MU10 97 aa14.01□□□□□ -0.17
GDF1-201ENST00000247005 A8MUN3 132 aa14.01□□□□□ -0.17
GDF1-201ENST00000247005 KRTAP13-2Q52LG2 175 aa14.01□□□□□ -0.17
GDF1-201ENST00000247005 SSBP3-AS1Q7Z2R9 100 aa14□□□□□ -0.17
GDF1-201ENST00000247005 MRPL34Q9BQ48 92 aaKnown RBP14□□□□□ -0.17
GDF1-201ENST00000247005 TP53AIP1Q9HCN2 124 aa13.98□□□□□ -0.17
GDF1-201ENST00000247005 PCOTHQ58A44 107 aa13.97□□□□□ -0.17
GDF1-201ENST00000247005 CD164Q04900 197 aa13.95□□□□□ -0.18
GDF1-201ENST00000247005 SACSQ9NZJ4 4579 aa13.94□□□□□ -0.18
GDF1-201ENST00000247005 SPANXA2-OT1Q8N9U9 137 aa13.91□□□□□ -0.18
GDF1-201ENST00000247005 Q5VV11 94 aa13.91□□□□□ -0.18
GDF1-201ENST00000247005 KRTAP1-4P0C5Y4 121 aa13.88□□□□□ -0.19
GDF1-201ENST00000247005 KRTAP21-3Q3LHN1 58 aa13.88□□□□□ -0.19
GDF1-201ENST00000247005 Q5W150 140 aa13.85□□□□□ -0.19
GDF1-201ENST00000247005 IGLV7-46A0A075B6I9 117 aa13.81□□□□□ -0.2
GDF1-201ENST00000247005 CHKB-CPT1BH3BT56 60 aa13.79□□□□□ -0.2
GDF1-201ENST00000247005 Q8N9P0 234 aaPredicted RBP13.78□□□□□ -0.2
GDF1-201ENST00000247005 PLA2G1BP04054 148 aaKnown RBP13.78□□□□□ -0.2
GDF1-201ENST00000247005 LINC00313P59037 77 aa13.75□□□□□ -0.21
GDF1-201ENST00000247005 DYNC1H1Q14204 4646 aaKnown RBP13.74□□□□□ -0.21
GDF1-201ENST00000247005 RETNLBQ9BQ08 111 aa13.73□□□□□ -0.21
GDF1-201ENST00000247005 KRTAP13-3Q3SY46 172 aa13.72□□□□□ -0.21
GDF1-201ENST00000247005 C8orf87E5RJ46 101 aa13.72□□□□□ -0.21
GDF1-201ENST00000247005 PRR15LQ9BU68 103 aa13.72□□□□□ -0.21
GDF1-201ENST00000247005 LIMD2Q9BT23 127 aa13.71□□□□□ -0.21
GDF1-201ENST00000247005 KTN1-AS1Q86SY8 53 aa13.71□□□□□ -0.21
GDF1-201ENST00000247005 COA5Q86WW8 74 aa13.71□□□□□ -0.21
GDF1-201ENST00000247005 SMR3BP02814 79 aaPredicted RBP13.7□□□□□ -0.22
GDF1-201ENST00000247005 SPTSSBQ8NFR3 76 aa13.7□□□□□ -0.22
GDF1-201ENST00000247005 TYMSOSQ8TAI1 123 aa13.68□□□□□ -0.22
GDF1-201ENST00000247005 LCA10Q71F78 164 aa13.67□□□□□ -0.22
GDF1-201ENST00000247005 RBM12B-AS1Q9P1G2 102 aa13.66□□□□□ -0.22
GDF1-201ENST00000247005 FAT1Q14517 4588 aa13.64□□□□□ -0.23
GDF1-201ENST00000247005 LOC101927531A0A1B0GV80 90 aa13.64□□□□□ -0.23
GDF1-201ENST00000247005 C4orf48Q5BLP8 95 aa13.63□□□□□ -0.23
GDF1-201ENST00000247005 PRR26Q8N8Z3 221 aa13.62□□□□□ -0.23
GDF1-201ENST00000247005 ATP11AUNQ6ZP68 121 aa13.61□□□□□ -0.23
GDF1-201ENST00000247005 Q75L30 129 aa13.59□□□□□ -0.23
GDF1-201ENST00000247005 KRTAP16-1A8MUX0 517 aa13.58□□□□□ -0.23
GDF1-201ENST00000247005 A6NED7 52 aa13.58□□□□□ -0.24
GDF1-201ENST00000247005 HRES1P13985 223 aa13.57□□□□□ -0.24
GDF1-201ENST00000247005 A6NN06 94 aa13.56□□□□□ -0.24
GDF1-201ENST00000247005 APOBP04114 4563 aaKnown RBP13.55□□□□□ -0.24
GDF1-201ENST00000247005 KMT2CQ8NEZ4 4911 aaKnown RBP13.54□□□□□ -0.24
GDF1-201ENST00000247005 RYR2Q92736 4967 aa13.52□□□□□ -0.24
GDF1-201ENST00000247005 FAM229AH3BQW9 127 aa13.52□□□□□ -0.24
GDF1-201ENST00000247005 SPINK1P00995 79 aa13.52□□□□□ -0.24
GDF1-201ENST00000247005 A0A1B0GVY2 172 aa13.51□□□□□ -0.25
GDF1-201ENST00000247005 LINC00304Q8N9R0 145 aa13.48□□□□□ -0.25
GDF1-201ENST00000247005 SPAG11AQ6PDA7 123 aa13.47□□□□□ -0.25
GDF1-201ENST00000247005 CDC42SE1Q9NRR8 79 aa13.46□□□□□ -0.25
GDF1-201ENST00000247005 IGKV2-30P06310 120 aa13.42□□□□□ -0.26
GDF1-201ENST00000247005 KRTAP10-4P60372 401 aaPredicted RBP13.39□□□□□ -0.27
GDF1-201ENST00000247005 IGKV2D-30A0A075B6S6 120 aa13.38□□□□□ -0.27
GDF1-201ENST00000247005 C7orf65Q6ZTY9 151 aa13.37□□□□□ -0.27
GDF1-201ENST00000247005 LINC01558Q9Y6Z2 57 aa13.35□□□□□ -0.27
GDF1-201ENST00000247005 PKHD1L1Q86WI1 4243 aa13.33□□□□□ -0.28
GDF1-201ENST00000247005 ACYP2P14621 99 aa13.32□□□□□ -0.28
GDF1-201ENST00000247005 SPINK7P58062 85 aa13.3□□□□□ -0.28
GDF1-201ENST00000247005 DMAC1Q96GE9 116 aa13.3□□□□□ -0.28
GDF1-201ENST00000247005 RPS29P62273 56 aaKnown RBP13.27□□□□□ -0.29
GDF1-201ENST00000247005 C9orf92A6NGG3 77 aa13.26□□□□□ -0.29
GDF1-201ENST00000247005 LRP1Q07954 4544 aaKnown RBP13.16□□□□□ -0.3
GDF1-201ENST00000247005 RYR3Q15413 4870 aa13.11□□□□□ -0.31
GDF1-201ENST00000247005 FLG2Q5D862 2391 aaPredicted RBP13.08□□□□□ -0.32
GDF1-201ENST00000247005 Q8N1X5 172 aa13.07□□□□□ -0.32
GDF1-201ENST00000247005 PRAC1Q96KF2 57 aa13.06□□□□□ -0.32
GDF1-201ENST00000247005 HSPG2P98160 4391 aa13.05□□□□□ -0.32
GDF1-201ENST00000247005 TNXBP22105 4242 aa13.02□□□□□ -0.33
GDF1-201ENST00000247005 A8MUU9 505 aa13.01□□□□□ -0.33
GDF1-201ENST00000247005 C20orf166-AS1Q96NR2 134 aa13.01□□□□□ -0.33
GDF1-201ENST00000247005 ADM2Q7Z4H4 148 aa12.98□□□□□ -0.33
GDF1-201ENST00000247005 FAT3Q8TDW7 4589 aa12.96□□□□□ -0.34
GDF1-201ENST00000247005 Q5VSD8 79 aa12.93□□□□□ -0.34
GDF1-201ENST00000247005 A0A1B0GU69 56 aa12.91□□□□□ -0.34
GDF1-201ENST00000247005 DMBT1Q9UGM3 2413 aaPredicted RBP12.9□□□□□ -0.34
GDF1-201ENST00000247005 RYR1P21817 5038 aa12.9□□□□□ -0.34
GDF1-201ENST00000247005 KRTAP17-1Q9BYP8 105 aa12.89□□□□□ -0.35
GDF1-201ENST00000247005 KRTAP10-8P60410 259 aa12.85□□□□□ -0.35
GDF1-201ENST00000247005 LINC01554Q52M75 96 aa12.83□□□□□ -0.36
GDF1-201ENST00000247005 KIAA1109Q2LD37 5005 aa12.83□□□□□ -0.36
GDF1-201ENST00000247005 MYCBP2O75592 4640 aa12.82□□□□□ -0.36
GDF1-201ENST00000247005 KRTAP3-1Q9BYR8 98 aa12.8□□□□□ -0.36
GDF1-201ENST00000247005 SPATA8Q6RVD6 105 aa12.72□□□□□ -0.37
GDF1-201ENST00000247005 H3BS24 57 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms