RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 BOD1L1Q8NFC6 3051 aa4.05□□□□□ -1.76
CSMD2-201ENST00000241312 PANO1I0J062 215 aa4.05□□□□□ -1.76
CSMD2-201ENST00000241312 ADGRG4Q8IZF6 3080 aa4.04□□□□□ -1.76
CSMD2-201ENST00000241312 KRTAP26-1Q6PEX3 210 aa4.03□□□□□ -1.76
CSMD2-201ENST00000241312 COL6A3P12111 3177 aa4.03□□□□□ -1.76
CSMD2-201ENST00000241312 UNC80Q8N2C7 3258 aa4.02□□□□□ -1.77
CSMD2-201ENST00000241312 KRTAP1-5Q9BYS1 174 aa4.01□□□□□ -1.77
CSMD2-201ENST00000241312 Q5VSD8 79 aa4□□□□□ -1.77
CSMD2-201ENST00000241312 SPATA8Q6RVD6 105 aa3.99□□□□□ -1.77
CSMD2-201ENST00000241312 DNAH14Q0VDD8 3507 aa3.98□□□□□ -1.77
CSMD2-201ENST00000241312 PLAC4Q8WY50 150 aa3.98□□□□□ -1.77
CSMD2-201ENST00000241312 CFAP47Q6ZTR5 3102 aa3.98□□□□□ -1.77
CSMD2-201ENST00000241312 ADM2Q7Z4H4 148 aa3.98□□□□□ -1.77
CSMD2-201ENST00000241312 KRTAP29-1A8MX34 341 aaPredicted RBP3.98□□□□□ -1.77
CSMD2-201ENST00000241312 KRTAP4-16G5E9R7 235 aaPredicted RBP3.97□□□□□ -1.77
CSMD2-201ENST00000241312 A6NN06 94 aa3.94□□□□□ -1.78
CSMD2-201ENST00000241312 HRNRQ86YZ3 2850 aaPredicted RBP3.94□□□□□ -1.78
CSMD2-201ENST00000241312 FBN1P35555 2871 aaKnown RBP3.93□□□□□ -1.78
CSMD2-201ENST00000241312 KRTAP10-1P60331 282 aa3.93□□□□□ -1.78
CSMD2-201ENST00000241312 KRTAP25-1Q3LHN0 102 aa3.93□□□□□ -1.78
CSMD2-201ENST00000241312 RPS29P62273 56 aaKnown RBP3.93□□□□□ -1.78
CSMD2-201ENST00000241312 KRTAP10-2P60368 255 aa3.91□□□□□ -1.78
CSMD2-201ENST00000241312 LCE6AA0A183 80 aa3.91□□□□□ -1.78
CSMD2-201ENST00000241312 VCANP13611 3396 aa3.9□□□□□ -1.79
CSMD2-201ENST00000241312 CELSR1Q9NYQ6 3014 aa3.88□□□□□ -1.79
CSMD2-201ENST00000241312 A8MU10 97 aa3.88□□□□□ -1.79
CSMD2-201ENST00000241312 A0A087X002 238 aa3.88□□□□□ -1.79
CSMD2-201ENST00000241312 NOTCH2NLQ7Z3S9 236 aa3.88□□□□□ -1.79
CSMD2-201ENST00000241312 CDH23Q9H251 3354 aa3.88□□□□□ -1.79
CSMD2-201ENST00000241312 SPEGQ15772 3267 aa3.87□□□□□ -1.79
CSMD2-201ENST00000241312 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
CSMD2-201ENST00000241312 A8MUU9 505 aa3.85□□□□□ -1.79
CSMD2-201ENST00000241312 C20orf166-AS1Q96NR2 134 aa3.84□□□□□ -1.79
CSMD2-201ENST00000241312 COL7A1Q02388 2944 aa3.84□□□□□ -1.79
CSMD2-201ENST00000241312 EYSQ5T1H1 3165 aa3.82□□□□□ -1.8
CSMD2-201ENST00000241312 KRTAP11-1Q8IUC1 163 aa3.81□□□□□ -1.8
CSMD2-201ENST00000241312 PP632Q6XCG6 107 aa3.78□□□□□ -1.8
CSMD2-201ENST00000241312 SZT2Q5T011 3432 aa3.78□□□□□ -1.8
CSMD2-201ENST00000241312 Q6ZRN7 208 aaPredicted RBP3.78□□□□□ -1.8
CSMD2-201ENST00000241312 TNP1P09430 55 aa3.78□□□□□ -1.8
CSMD2-201ENST00000241312 KRTAP13-1Q8IUC0 172 aa3.77□□□□□ -1.81
CSMD2-201ENST00000241312 C10orf95Q9H7T3 257 aa3.77□□□□□ -1.81
CSMD2-201ENST00000241312 USP34Q70CQ2 3546 aa3.76□□□□□ -1.81
CSMD2-201ENST00000241312 KRTAP13-2Q52LG2 175 aa3.76□□□□□ -1.81
CSMD2-201ENST00000241312 SPTBN5Q9NRC6 3674 aaKnown RBP3.73□□□□□ -1.81
CSMD2-201ENST00000241312 WDFY3Q8IZQ1 3526 aa3.72□□□□□ -1.81
CSMD2-201ENST00000241312 KRTAP7-1Q8IUC3 87 aa3.72□□□□□ -1.81
CSMD2-201ENST00000241312 KRTAP21-3Q3LHN1 58 aa3.72□□□□□ -1.81
CSMD2-201ENST00000241312 MYO15AQ9UKN7 3530 aa3.71□□□□□ -1.81
CSMD2-201ENST00000241312 MEGF8Q7Z7M0 2845 aa3.67□□□□□ -1.82
CSMD2-201ENST00000241312 FBN3Q75N90 2809 aa3.65□□□□□ -1.82
CSMD2-201ENST00000241312 P0C880 135 aa3.64□□□□□ -1.83
CSMD2-201ENST00000241312 LOC400499M0QZD8 3231 aa3.63□□□□□ -1.83
CSMD2-201ENST00000241312 H0YAA0 97 aa3.63□□□□□ -1.83
CSMD2-201ENST00000241312 OTOGQ6ZRI0 2925 aa3.62□□□□□ -1.83
CSMD2-201ENST00000241312 LAMA5O15230 3695 aa3.59□□□□□ -1.84
CSMD2-201ENST00000241312 XP32Q5T750 250 aa3.59□□□□□ -1.84
CSMD2-201ENST00000241312 KRTAP10-8P60410 259 aa3.57□□□□□ -1.84
CSMD2-201ENST00000241312 TPRXLQ17RH7 258 aa3.55□□□□□ -1.84
CSMD2-201ENST00000241312 PRO2289Q9P1D8 64 aa3.55□□□□□ -1.84
CSMD2-201ENST00000241312 KRTAP1-4P0C5Y4 121 aa3.54□□□□□ -1.84
CSMD2-201ENST00000241312 ASPMQ8IZT6 3477 aa3.54□□□□□ -1.84
CSMD2-201ENST00000241312 CSMD1Q96PZ7 3565 aa3.53□□□□□ -1.84
CSMD2-201ENST00000241312 ZFHX4Q86UP3 3567 aa3.53□□□□□ -1.84
CSMD2-201ENST00000241312 SMG1Q96Q15 3661 aaKnown RBP3.53□□□□□ -1.84
CSMD2-201ENST00000241312 DCHS1Q96JQ0 3298 aa3.53□□□□□ -1.85
CSMD2-201ENST00000241312 ZFHX3Q15911 3703 aa3.52□□□□□ -1.85
CSMD2-201ENST00000241312 A0A1B0GVY2 172 aa3.52□□□□□ -1.85
CSMD2-201ENST00000241312 NBPF19A0A087WUL8 3843 aa3.52□□□□□ -1.85
CSMD2-201ENST00000241312 KRTAP10-10P60014 251 aa3.45□□□□□ -1.86
CSMD2-201ENST00000241312 DMDP11532 3685 aa3.45□□□□□ -1.86
CSMD2-201ENST00000241312 SPENQ96T58 3664 aaKnown RBP3.45□□□□□ -1.86
CSMD2-201ENST00000241312 KRTAP13-3Q3SY46 172 aa3.45□□□□□ -1.86
CSMD2-201ENST00000241312 RELNP78509 3460 aa3.42□□□□□ -1.86
CSMD2-201ENST00000241312 KRTAP13-4Q3LI77 160 aa3.39□□□□□ -1.87
CSMD2-201ENST00000241312 KRTAP12-2P59991 146 aa3.37□□□□□ -1.87
CSMD2-201ENST00000241312 CUBNO60494 3623 aa3.36□□□□□ -1.87
CSMD2-201ENST00000241312 VPS13CQ709C8 3753 aa3.36□□□□□ -1.87
CSMD2-201ENST00000241312 TRRAPQ9Y4A5 3859 aa3.34□□□□□ -1.87
CSMD2-201ENST00000241312 SVEP1Q4LDE5 3571 aa3.3□□□□□ -1.88
CSMD2-201ENST00000241312 KRTAP12-1P59990 96 aa3.3□□□□□ -1.88
CSMD2-201ENST00000241312 AKAP9Q99996 3911 aa3.28□□□□□ -1.88
CSMD2-201ENST00000241312 KRTAP15-1Q3LI76 137 aa3.24□□□□□ -1.89
CSMD2-201ENST00000241312 INE1O15225 51 aa3.2□□□□□ -1.9
CSMD2-201ENST00000241312 CSMD3Q7Z407 3707 aa3.2□□□□□ -1.9
CSMD2-201ENST00000241312 MUC3AQ02505 3323 aa3.18□□□□□ -1.9
CSMD2-201ENST00000241312 KRTAP3-1Q9BYR8 98 aa3.16□□□□□ -1.9
CSMD2-201ENST00000241312 KRTAP10-6P60371 365 aaPredicted RBP3.15□□□□□ -1.9
CSMD2-201ENST00000241312 CSMD2Q7Z408 3487 aa3.13□□□□□ -1.91
CSMD2-201ENST00000241312 ANK2Q01484 3957 aa3.11□□□□□ -1.91
CSMD2-201ENST00000241312 KRTAP10-12P60413 245 aa3.09□□□□□ -1.91
CSMD2-201ENST00000241312 KRTAP23-1A1A580 65 aa3.08□□□□□ -1.92
CSMD2-201ENST00000241312 BSNQ9UPA5 3926 aa3.06□□□□□ -1.92
CSMD2-201ENST00000241312 LYSTQ99698 3801 aa3.05□□□□□ -1.92
CSMD2-201ENST00000241312 ANK3Q12955 4377 aaKnown RBP3.04□□□□□ -1.92
CSMD2-201ENST00000241312 CRCT1Q9UGL9 99 aa3.03□□□□□ -1.93
CSMD2-201ENST00000241312 ALMS1Q8TCU4 4167 aa3.02□□□□□ -1.93
CSMD2-201ENST00000241312 CMYA5Q8N3K9 4069 aa3.02□□□□□ -1.93
CSMD2-201ENST00000241312 KRTAP3-2Q9BYR7 98 aa3.01□□□□□ -1.93
CSMD2-201ENST00000241312 ZNF469Q96JG9 3925 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms