RNA–Protein interactions for RNA: ENST00000236273.8

SYF2-201, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYF2, Length 1,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-201ENST00000236273 A8MUU9 505 aa11.78□□□□□ -0.52
SYF2-201ENST00000236273 KRTAP16-1A8MUX0 517 aa11.77□□□□□ -0.53
SYF2-201ENST00000236273 KRTAP19-2Q3LHN2 52 aa11.77□□□□□ -0.53
SYF2-201ENST00000236273 LINC00313P59037 77 aa11.75□□□□□ -0.53
SYF2-201ENST00000236273 PRO0461Q9UI25 63 aa11.74□□□□□ -0.53
SYF2-201ENST00000236273 K7EP34 96 aa11.72□□□□□ -0.53
SYF2-201ENST00000236273 LCE2CQ5TA81 110 aa11.72□□□□□ -0.53
SYF2-201ENST00000236273 IGHV6-1A0A0B4J1U7 121 aa11.7□□□□□ -0.54
SYF2-201ENST00000236273 ATP11AUNQ6ZP68 121 aa11.7□□□□□ -0.54
SYF2-201ENST00000236273 A0A1B0GVX0 72 aa11.69□□□□□ -0.54
SYF2-201ENST00000236273 J3KT08 172 aa11.69□□□□□ -0.54
SYF2-201ENST00000236273 C8orf87E5RJ46 101 aa11.62□□□□□ -0.55
SYF2-201ENST00000236273 NREPQ16612 68 aa11.61□□□□□ -0.55
SYF2-201ENST00000236273 IGKV3D-7A0A0C4DH55 119 aa11.6□□□□□ -0.55
SYF2-201ENST00000236273 A8MWP4 228 aa11.6□□□□□ -0.55
SYF2-201ENST00000236273 NDUFB1O75438 58 aa11.56□□□□□ -0.56
SYF2-201ENST00000236273 GTF2H5Q6ZYL4 71 aa11.56□□□□□ -0.56
SYF2-201ENST00000236273 PRR15Q8IV56 129 aa11.53□□□□□ -0.56
SYF2-201ENST00000236273 C8orf17Q9NRJ1 99 aa11.53□□□□□ -0.56
SYF2-201ENST00000236273 F8W1H4 67 aa11.5□□□□□ -0.57
SYF2-201ENST00000236273 MT1HP80294 61 aa11.49□□□□□ -0.57
SYF2-201ENST00000236273 Q8N9P0 234 aaPredicted RBP11.49□□□□□ -0.57
SYF2-201ENST00000236273 Q6ZVQ6 151 aa11.48□□□□□ -0.57
SYF2-201ENST00000236273 K7EQZ3 153 aa11.45□□□□□ -0.58
SYF2-201ENST00000236273 LINC00846Q9NV44 126 aa11.44□□□□□ -0.58
SYF2-201ENST00000236273 FLGP20930 4061 aaPredicted RBP11.44□□□□□ -0.58
SYF2-201ENST00000236273 MMP24-AS1A0A0U1RRL7 71 aa11.43□□□□□ -0.58
SYF2-201ENST00000236273 BPY2O14599 106 aa11.43□□□□□ -0.58
SYF2-201ENST00000236273 ETDBQ3ZM63 59 aa11.43□□□□□ -0.58
SYF2-201ENST00000236273 ZCCHC13Q8WW36 166 aaKnown RBP11.39□□□□□ -0.59
SYF2-201ENST00000236273 COX6B2Q6YFQ2 88 aa11.37□□□□□ -0.59
SYF2-201ENST00000236273 TMEM254Q8TBM7 123 aa11.35□□□□□ -0.59
SYF2-201ENST00000236273 Q8N9L7 120 aa11.35□□□□□ -0.59
SYF2-201ENST00000236273 MRPL34Q9BQ48 92 aaKnown RBP11.34□□□□□ -0.59
SYF2-201ENST00000236273 HRES1P13985 223 aa11.33□□□□□ -0.6
SYF2-201ENST00000236273 MPLKIPQ8TAP9 179 aa11.33□□□□□ -0.6
SYF2-201ENST00000236273 UBL5Q9BZL1 73 aa11.33□□□□□ -0.6
SYF2-201ENST00000236273 hDV103S1A0JD37 113 aa11.32□□□□□ -0.6
SYF2-201ENST00000236273 SPINK7P58062 85 aa11.24□□□□□ -0.61
SYF2-201ENST00000236273 A0A1B0GV90 55 aa11.23□□□□□ -0.61
SYF2-201ENST00000236273 LORP23490 312 aaPredicted RBP11.22□□□□□ -0.61
SYF2-201ENST00000236273 KRTAP10-6P60371 365 aaPredicted RBP11.22□□□□□ -0.61
SYF2-201ENST00000236273 WFDC13Q8IUB5 93 aa11.22□□□□□ -0.61
SYF2-201ENST00000236273 CASC2Q6XLA1 102 aa11.2□□□□□ -0.62
SYF2-201ENST00000236273 KRTAP9-2Q9BYQ4 174 aa11.19□□□□□ -0.62
SYF2-201ENST00000236273 M0R2T5 61 aa11.17□□□□□ -0.62
SYF2-201ENST00000236273 Q5W150 140 aa11.17□□□□□ -0.62
SYF2-201ENST00000236273 NDUFS5O43920 106 aa11.16□□□□□ -0.62
SYF2-201ENST00000236273 CXCL6P80162 114 aa11.14□□□□□ -0.63
SYF2-201ENST00000236273 RBM12B-AS1Q9P1G2 102 aa11.14□□□□□ -0.63
SYF2-201ENST00000236273 HCG22E2RYF7 251 aa11.12□□□□□ -0.63
SYF2-201ENST00000236273 ACYP1P07311 99 aa11.1□□□□□ -0.63
SYF2-201ENST00000236273 FAM240AA0A1B0GVK7 77 aa11.09□□□□□ -0.63
SYF2-201ENST00000236273 FAM236DA0A1B0GTK5 79 aa11.09□□□□□ -0.63
SYF2-201ENST00000236273 FAM236CP0DP71 79 aa11.09□□□□□ -0.63
SYF2-201ENST00000236273 LCE2DQ5TA82 110 aaPredicted RBP11.06□□□□□ -0.64
SYF2-201ENST00000236273 IGKV2D-30A0A075B6S6 120 aa10.97□□□□□ -0.65
SYF2-201ENST00000236273 IGKV2-30P06310 120 aa10.97□□□□□ -0.65
SYF2-201ENST00000236273 KRTAP9-8Q9BYQ0 159 aa10.96□□□□□ -0.65
SYF2-201ENST00000236273 C7orf65Q6ZTY9 151 aa10.94□□□□□ -0.66
SYF2-201ENST00000236273 ATP5EP2Q5VTU8 51 aa10.92□□□□□ -0.66
SYF2-201ENST00000236273 TP53AIP1Q9HCN2 124 aa10.89□□□□□ -0.67
SYF2-201ENST00000236273 LINC00643Q86TS7 51 aa10.87□□□□□ -0.67
SYF2-201ENST00000236273 HIST1H4AP62805 103 aaKnown RBP10.83□□□□□ -0.68
SYF2-201ENST00000236273 MT2AP02795 61 aa10.81□□□□□ -0.68
SYF2-201ENST00000236273 H1FX-AS1Q4G0G2 97 aa10.8□□□□□ -0.68
SYF2-201ENST00000236273 A0A087WVE0 104 aa10.79□□□□□ -0.68
SYF2-201ENST00000236273 C4orf26Q17RF5 130 aa10.79□□□□□ -0.68
SYF2-201ENST00000236273 KRTAP3-1Q9BYR8 98 aa10.74□□□□□ -0.69
SYF2-201ENST00000236273 J3QR89 54 aa10.73□□□□□ -0.69
SYF2-201ENST00000236273 MT1FP04733 61 aa10.73□□□□□ -0.69
SYF2-201ENST00000236273 FSIP2Q5CZC0 6907 aa10.72□□□□□ -0.69
SYF2-201ENST00000236273 KRTAP9-6A0A140TA67 174 aa10.69□□□□□ -0.7
SYF2-201ENST00000236273 TRAV22A0A0B4J277 110 aa10.68□□□□□ -0.7
SYF2-201ENST00000236273 CYP4F30PQ9H0H9 118 aa10.68□□□□□ -0.7
SYF2-201ENST00000236273 UQCRQO14949 82 aa10.65□□□□□ -0.7
SYF2-201ENST00000236273 C1orf64Q8NEQ6 169 aa10.61□□□□□ -0.71
SYF2-201ENST00000236273 KRTAP9-3Q9BYQ3 159 aa10.61□□□□□ -0.71
SYF2-201ENST00000236273 CRCT1Q9UGL9 99 aa10.61□□□□□ -0.71
SYF2-201ENST00000236273 KRTAP10-10P60014 251 aa10.6□□□□□ -0.71
SYF2-201ENST00000236273 LOC101927531A0A1B0GV80 90 aa10.59□□□□□ -0.71
SYF2-201ENST00000236273 USH2AO75445 5202 aa10.58□□□□□ -0.72
SYF2-201ENST00000236273 H0Y9P7 68 aa10.58□□□□□ -0.72
SYF2-201ENST00000236273 OCR1Q9BZK8 76 aa10.58□□□□□ -0.72
SYF2-201ENST00000236273 ATOX1O00244 68 aa10.53□□□□□ -0.72
SYF2-201ENST00000236273 LCE2BO14633 110 aa10.5□□□□□ -0.73
SYF2-201ENST00000236273 K7ERU9 68 aa10.48□□□□□ -0.73
SYF2-201ENST00000236273 S4R3F8 94 aa10.46□□□□□ -0.73
SYF2-201ENST00000236273 MT-ATP8P03928 68 aa10.45□□□□□ -0.74
SYF2-201ENST00000236273 LCA10Q71F78 164 aa10.45□□□□□ -0.74
SYF2-201ENST00000236273 C5orf47Q569G3 176 aa10.44□□□□□ -0.74
SYF2-201ENST00000236273 LINC00208Q96KT6 92 aa10.44□□□□□ -0.74
SYF2-201ENST00000236273 SSPOA2VEC9 5147 aa10.43□□□□□ -0.74
SYF2-201ENST00000236273 IMUPQ9GZP8 106 aa10.42□□□□□ -0.74
SYF2-201ENST00000236273 KLKP1Q107X0 134 aa10.41□□□□□ -0.74
SYF2-201ENST00000236273 KRTAP3-3Q9BYR6 98 aa10.41□□□□□ -0.74
SYF2-201ENST00000236273 MP68P56378 58 aa10.37□□□□□ -0.75
SYF2-201ENST00000236273 CSAG1Q6PB30 78 aa10.35□□□□□ -0.75
SYF2-201ENST00000236273 SCGB1A1P11684 91 aa10.34□□□□□ -0.75
SYF2-201ENST00000236273 H3BPC8 53 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms