RNA–Protein interactions for RNA: ENST00000229390.7

SRSF9-201, Transcript of serine and arginine rich splicing factor 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF9, Length 1,201 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-201ENST00000229390 ATXN8Q156A1 80 aa13.4□□□□□ -0.26
SRSF9-201ENST00000229390 FAM236DA0A1B0GTK5 79 aa13.37□□□□□ -0.27
SRSF9-201ENST00000229390 C8orf87E5RJ46 101 aa13.37□□□□□ -0.27
SRSF9-201ENST00000229390 TSTD3H0UI37 97 aa13.37□□□□□ -0.27
SRSF9-201ENST00000229390 FAM236CP0DP71 79 aa13.37□□□□□ -0.27
SRSF9-201ENST00000229390 LOC105371267A0A1B0GV96 52 aa13.34□□□□□ -0.27
SRSF9-201ENST00000229390 Q6ZQT0 140 aa13.34□□□□□ -0.27
SRSF9-201ENST00000229390 C21orf62-AS1Q17RA5 79 aa13.33□□□□□ -0.28
SRSF9-201ENST00000229390 J3KT08 172 aa13.32□□□□□ -0.28
SRSF9-201ENST00000229390 JMJD7-PLA2G4BH0Y9G9 81 aa13.3□□□□□ -0.28
SRSF9-201ENST00000229390 BATFQ16520 125 aa13.29□□□□□ -0.28
SRSF9-201ENST00000229390 RBM12B-AS1Q9P1G2 102 aa13.29□□□□□ -0.28
SRSF9-201ENST00000229390 HRES1P13985 223 aa13.28□□□□□ -0.28
SRSF9-201ENST00000229390 NDUFB1O75438 58 aa13.26□□□□□ -0.29
SRSF9-201ENST00000229390 LOC110117498A0A087WWA1 95 aa13.24□□□□□ -0.29
SRSF9-201ENST00000229390 LYRM7Q5U5X0 104 aa13.24□□□□□ -0.29
SRSF9-201ENST00000229390 C14orf132Q9NPU4 83 aa13.24□□□□□ -0.29
SRSF9-201ENST00000229390 MPLKIPQ8TAP9 179 aa13.23□□□□□ -0.29
SRSF9-201ENST00000229390 KRTAP9-8Q9BYQ0 159 aa13.22□□□□□ -0.29
SRSF9-201ENST00000229390 ZCCHC13Q8WW36 166 aaKnown RBP13.21□□□□□ -0.29
SRSF9-201ENST00000229390 PDE6GP18545 87 aa13.19□□□□□ -0.3
SRSF9-201ENST00000229390 A0A1B0GW54 56 aa13.17□□□□□ -0.3
SRSF9-201ENST00000229390 A8MWP4 228 aa13.17□□□□□ -0.3
SRSF9-201ENST00000229390 C8orf17Q9NRJ1 99 aa13.16□□□□□ -0.3
SRSF9-201ENST00000229390 IGKV3D-7A0A0C4DH55 119 aa13.13□□□□□ -0.31
SRSF9-201ENST00000229390 SPINK7P58062 85 aa13.12□□□□□ -0.31
SRSF9-201ENST00000229390 Q8N9P0 234 aaPredicted RBP13.12□□□□□ -0.31
SRSF9-201ENST00000229390 NREPQ16612 68 aa13.11□□□□□ -0.31
SRSF9-201ENST00000229390 C9orf118A6NHY6 69 aa13.1□□□□□ -0.31
SRSF9-201ENST00000229390 TAX1BP3O14907 124 aa13.1□□□□□ -0.31
SRSF9-201ENST00000229390 MTURNQ8N3F0 131 aa13.08□□□□□ -0.32
SRSF9-201ENST00000229390 A0A1W2PPM0 123 aa13.06□□□□□ -0.32
SRSF9-201ENST00000229390 Q6ZVQ6 151 aa13.06□□□□□ -0.32
SRSF9-201ENST00000229390 MT2AP02795 61 aa13.05□□□□□ -0.32
SRSF9-201ENST00000229390 PRR15Q8IV56 129 aa13.04□□□□□ -0.32
SRSF9-201ENST00000229390 H3BT86 120 aa13□□□□□ -0.33
SRSF9-201ENST00000229390 USH2AO75445 5202 aa12.99□□□□□ -0.33
SRSF9-201ENST00000229390 MMP24-AS1A0A0U1RRL7 71 aa12.95□□□□□ -0.34
SRSF9-201ENST00000229390 MT1FP04733 61 aa12.95□□□□□ -0.34
SRSF9-201ENST00000229390 WFDC13Q8IUB5 93 aa12.95□□□□□ -0.34
SRSF9-201ENST00000229390 KRTAP10-10P60014 251 aa12.93□□□□□ -0.34
SRSF9-201ENST00000229390 TMEM254Q8TBM7 123 aa12.93□□□□□ -0.34
SRSF9-201ENST00000229390 MRPL34Q9BQ48 92 aaKnown RBP12.93□□□□□ -0.34
SRSF9-201ENST00000229390 K7EQZ3 153 aa12.92□□□□□ -0.34
SRSF9-201ENST00000229390 NDUFS5O43920 106 aa12.89□□□□□ -0.35
SRSF9-201ENST00000229390 SPCS1Q9Y6A9 102 aa12.89□□□□□ -0.35
SRSF9-201ENST00000229390 hDV103S1A0JD37 113 aa12.88□□□□□ -0.35
SRSF9-201ENST00000229390 SSPOA2VEC9 5147 aa12.86□□□□□ -0.35
SRSF9-201ENST00000229390 BPY2O14599 106 aa12.85□□□□□ -0.35
SRSF9-201ENST00000229390 COL5A1-AS1Q5SY13 56 aa12.81□□□□□ -0.36
SRSF9-201ENST00000229390 KRTAP9-3Q9BYQ3 159 aa12.81□□□□□ -0.36
SRSF9-201ENST00000229390 LCE2BO14633 110 aa12.79□□□□□ -0.36
SRSF9-201ENST00000229390 SMCPP49901 116 aaPredicted RBP12.78□□□□□ -0.36
SRSF9-201ENST00000229390 Q8N9L7 120 aa12.76□□□□□ -0.37
SRSF9-201ENST00000229390 IGKV2D-30A0A075B6S6 120 aa12.72□□□□□ -0.37
SRSF9-201ENST00000229390 IGKV2-30P06310 120 aa12.72□□□□□ -0.37
SRSF9-201ENST00000229390 K7EP34 96 aa12.7□□□□□ -0.38
SRSF9-201ENST00000229390 PRO0461Q9UI25 63 aa12.7□□□□□ -0.38
SRSF9-201ENST00000229390 Q5W150 140 aa12.69□□□□□ -0.38
SRSF9-201ENST00000229390 CASC2Q6XLA1 102 aa12.68□□□□□ -0.38
SRSF9-201ENST00000229390 H1FX-AS1Q4G0G2 97 aa12.66□□□□□ -0.38
SRSF9-201ENST00000229390 HCG22E2RYF7 251 aa12.64□□□□□ -0.39
SRSF9-201ENST00000229390 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.62□□□□□ -0.39
SRSF9-201ENST00000229390 C7orf65Q6ZTY9 151 aa12.62□□□□□ -0.39
SRSF9-201ENST00000229390 KRTAP19-1Q8IUB9 90 aa12.62□□□□□ -0.39
SRSF9-201ENST00000229390 PCP4L1A6NKN8 68 aa12.6□□□□□ -0.39
SRSF9-201ENST00000229390 LINC00846Q9NV44 126 aa12.58□□□□□ -0.4
SRSF9-201ENST00000229390 FCGBPQ9Y6R7 5405 aaPredicted RBP12.58□□□□□ -0.4
SRSF9-201ENST00000229390 UBL5Q9BZL1 73 aa12.57□□□□□ -0.4
SRSF9-201ENST00000229390 GTF2H5Q6ZYL4 71 aa12.53□□□□□ -0.4
SRSF9-201ENST00000229390 CXCL6P80162 114 aa12.52□□□□□ -0.41
SRSF9-201ENST00000229390 KRTAP9-7A8MTY7 169 aa12.49□□□□□ -0.41
SRSF9-201ENST00000229390 C4orf26Q17RF5 130 aa12.49□□□□□ -0.41
SRSF9-201ENST00000229390 F8W1H4 67 aa12.42□□□□□ -0.42
SRSF9-201ENST00000229390 ETDBQ3ZM63 59 aa12.39□□□□□ -0.43
SRSF9-201ENST00000229390 KRTAP19-6Q3LI70 58 aa12.31□□□□□ -0.44
SRSF9-201ENST00000229390 C5orf47Q569G3 176 aa12.29□□□□□ -0.44
SRSF9-201ENST00000229390 KRTAP3-1Q9BYR8 98 aa12.26□□□□□ -0.45
SRSF9-201ENST00000229390 TP53AIP1Q9HCN2 124 aa12.24□□□□□ -0.45
SRSF9-201ENST00000229390 C1orf64Q8NEQ6 169 aa12.23□□□□□ -0.45
SRSF9-201ENST00000229390 S4R3F8 94 aa12.22□□□□□ -0.45
SRSF9-201ENST00000229390 FAM236AA0A1B0GUQ0 79 aa12.17□□□□□ -0.46
SRSF9-201ENST00000229390 FAM236BA0A1B0GV22 79 aa12.17□□□□□ -0.46
SRSF9-201ENST00000229390 LCA10Q71F78 164 aa12.13□□□□□ -0.47
SRSF9-201ENST00000229390 CSAG1Q6PB30 78 aa12.12□□□□□ -0.47
SRSF9-201ENST00000229390 MACF1Q9UPN3 7388 aaKnown RBP12.12□□□□□ -0.47
SRSF9-201ENST00000229390 ACYP1P07311 99 aa12.08□□□□□ -0.48
SRSF9-201ENST00000229390 FAM240AA0A1B0GVK7 77 aa12.05□□□□□ -0.48
SRSF9-201ENST00000229390 CYP4F30PQ9H0H9 118 aa12.04□□□□□ -0.48
SRSF9-201ENST00000229390 SYNE2Q8WXH0 6885 aaKnown RBP12□□□□□ -0.49
SRSF9-201ENST00000229390 TRAV22A0A0B4J277 110 aa11.98□□□□□ -0.49
SRSF9-201ENST00000229390 ATP5EP2Q5VTU8 51 aa11.98□□□□□ -0.49
SRSF9-201ENST00000229390 HIST1H4AP62805 103 aaKnown RBP11.95□□□□□ -0.5
SRSF9-201ENST00000229390 LOC101927531A0A1B0GV80 90 aa11.92□□□□□ -0.5
SRSF9-201ENST00000229390 A0A1B0GV90 55 aa11.91□□□□□ -0.5
SRSF9-201ENST00000229390 A0A087WVE0 104 aa11.89□□□□□ -0.51
SRSF9-201ENST00000229390 Q5VV11 94 aa11.87□□□□□ -0.51
SRSF9-201ENST00000229390 MT1BP07438 61 aa11.85□□□□□ -0.51
SRSF9-201ENST00000229390 SPRR2GQ9BYE4 73 aa11.85□□□□□ -0.51
SRSF9-201ENST00000229390 KLKP1Q107X0 134 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms