RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 SEC61BP60468 96 aaKnown RBP9.27□□□□□ -0.93
HDAC5-201ENST00000225983 CELSR2Q9HCU4 2923 aa9.25□□□□□ -0.93
HDAC5-201ENST00000225983 DMXL1Q9Y485 3027 aa9.25□□□□□ -0.93
HDAC5-201ENST00000225983 MYO15AQ9UKN7 3530 aa9.24□□□□□ -0.93
HDAC5-201ENST00000225983 KRTAP13-1Q8IUC0 172 aa9.23□□□□□ -0.93
HDAC5-201ENST00000225983 ZANQ9Y493 2812 aa9.23□□□□□ -0.93
HDAC5-201ENST00000225983 TNRC18O15417 2968 aaPredicted RBP9.23□□□□□ -0.93
HDAC5-201ENST00000225983 ROMO1P60602 79 aa9.21□□□□□ -0.94
HDAC5-201ENST00000225983 LOC400499M0QZD8 3231 aa9.21□□□□□ -0.94
HDAC5-201ENST00000225983 ASB16-AS1Q495Z4 193 aa9.2□□□□□ -0.94
HDAC5-201ENST00000225983 KRTAP13-2Q52LG2 175 aa9.2□□□□□ -0.94
HDAC5-201ENST00000225983 M0QZ58 72 aa9.2□□□□□ -0.94
HDAC5-201ENST00000225983 CRYBG3Q68DQ2 2970 aa9.18□□□□□ -0.94
HDAC5-201ENST00000225983 NIPBLQ6KC79 2804 aaeCLIP9.18□□□□□ -0.94
HDAC5-201ENST00000225983 ADM2Q7Z4H4 148 aa9.17□□□□□ -0.94
HDAC5-201ENST00000225983 KMT2BQ9UMN6 2715 aaPredicted RBP9.14□□□□□ -0.95
HDAC5-201ENST00000225983 HRNRQ86YZ3 2850 aaPredicted RBP9.14□□□□□ -0.95
HDAC5-201ENST00000225983 DCHS2Q6V1P9 2916 aa9.13□□□□□ -0.95
HDAC5-201ENST00000225983 RPS29P62273 56 aaKnown RBP9.08□□□□□ -0.96
HDAC5-201ENST00000225983 H3BS24 57 aa9.07□□□□□ -0.96
HDAC5-201ENST00000225983 A8MU10 97 aa9.05□□□□□ -0.96
HDAC5-201ENST00000225983 TENM4Q6N022 2769 aa9.04□□□□□ -0.96
HDAC5-201ENST00000225983 FBN2P35556 2912 aa9.02□□□□□ -0.97
HDAC5-201ENST00000225983 A6NN06 94 aa9.01□□□□□ -0.97
HDAC5-201ENST00000225983 NF1P21359 2839 aa8.94□□□□□ -0.98
HDAC5-201ENST00000225983 WDFY3Q8IZQ1 3526 aa8.9□□□□□ -0.98
HDAC5-201ENST00000225983 A8MUU9 505 aa8.87□□□□□ -0.99
HDAC5-201ENST00000225983 RELNP78509 3460 aa8.87□□□□□ -0.99
HDAC5-201ENST00000225983 PLAC4Q8WY50 150 aa8.86□□□□□ -0.99
HDAC5-201ENST00000225983 KRTAP25-1Q3LHN0 102 aa8.85□□□□□ -0.99
HDAC5-201ENST00000225983 A0A0A0MQY5 61 aa8.84□□□□□ -0.99
HDAC5-201ENST00000225983 KRTAP1-4P0C5Y4 121 aa8.78□□□□□ -1
HDAC5-201ENST00000225983 C20orf166-AS1Q96NR2 134 aa8.77□□□□□ -1.01
HDAC5-201ENST00000225983 ZFHX4Q86UP3 3567 aa8.77□□□□□ -1.01
HDAC5-201ENST00000225983 MXRA5Q9NR99 2828 aa8.73□□□□□ -1.01
HDAC5-201ENST00000225983 ASPMQ8IZT6 3477 aa8.72□□□□□ -1.01
HDAC5-201ENST00000225983 DCHS1Q96JQ0 3298 aa8.71□□□□□ -1.01
HDAC5-201ENST00000225983 CELSR1Q9NYQ6 3014 aa8.7□□□□□ -1.02
HDAC5-201ENST00000225983 LAMA5O15230 3695 aa8.69□□□□□ -1.02
HDAC5-201ENST00000225983 KRTAP21-3Q3LHN1 58 aa8.65□□□□□ -1.03
HDAC5-201ENST00000225983 TENM3Q9P273 2699 aa8.61□□□□□ -1.03
HDAC5-201ENST00000225983 XP32Q5T750 250 aa8.6□□□□□ -1.03
HDAC5-201ENST00000225983 TENM1Q9UKZ4 2725 aa8.6□□□□□ -1.03
HDAC5-201ENST00000225983 KRTAP16-1A8MUX0 517 aa8.57□□□□□ -1.04
HDAC5-201ENST00000225983 DMDP11532 3685 aa8.54□□□□□ -1.04
HDAC5-201ENST00000225983 CSMD1Q96PZ7 3565 aa8.54□□□□□ -1.04
HDAC5-201ENST00000225983 TENM2Q9NT68 2774 aa8.53□□□□□ -1.04
HDAC5-201ENST00000225983 NDUFAF8A1L188 74 aa8.52□□□□□ -1.04
HDAC5-201ENST00000225983 H0YAA0 97 aa8.5□□□□□ -1.05
HDAC5-201ENST00000225983 C10orf95Q9H7T3 257 aa8.47□□□□□ -1.05
HDAC5-201ENST00000225983 SMG1Q96Q15 3661 aaKnown RBP8.46□□□□□ -1.06
HDAC5-201ENST00000225983 TNP1P09430 55 aa8.45□□□□□ -1.06
HDAC5-201ENST00000225983 TGP01266 2768 aa8.43□□□□□ -1.06
HDAC5-201ENST00000225983 PKD1L1Q8TDX9 2849 aa8.41□□□□□ -1.06
HDAC5-201ENST00000225983 A0A1B0GVY2 172 aa8.4□□□□□ -1.07
HDAC5-201ENST00000225983 NBPF19A0A087WUL8 3843 aa8.39□□□□□ -1.07
HDAC5-201ENST00000225983 MUC3AQ02505 3323 aa8.38□□□□□ -1.07
HDAC5-201ENST00000225983 PDZD2O15018 2839 aa8.36□□□□□ -1.07
HDAC5-201ENST00000225983 TPRXLQ17RH7 258 aa8.33□□□□□ -1.08
HDAC5-201ENST00000225983 KRTAP13-3Q3SY46 172 aa8.32□□□□□ -1.08
HDAC5-201ENST00000225983 VWFP04275 2813 aa8.31□□□□□ -1.08
HDAC5-201ENST00000225983 P0C880 135 aa8.3□□□□□ -1.08
HDAC5-201ENST00000225983 SVEP1Q4LDE5 3571 aa8.3□□□□□ -1.08
HDAC5-201ENST00000225983 FBN1P35555 2871 aaKnown RBP8.28□□□□□ -1.08
HDAC5-201ENST00000225983 KRTAP10-8P60410 259 aa8.26□□□□□ -1.09
HDAC5-201ENST00000225983 PP632Q6XCG6 107 aa8.19□□□□□ -1.1
HDAC5-201ENST00000225983 OTOGQ6ZRI0 2925 aa8.18□□□□□ -1.1
HDAC5-201ENST00000225983 ZFHX3Q15911 3703 aa8.16□□□□□ -1.1
HDAC5-201ENST00000225983 CUBNO60494 3623 aa8.16□□□□□ -1.1
HDAC5-201ENST00000225983 ANK3Q12955 4377 aaKnown RBP8.11□□□□□ -1.11
HDAC5-201ENST00000225983 KRTAP10-10P60014 251 aa8.09□□□□□ -1.11
HDAC5-201ENST00000225983 CSMD2Q7Z408 3487 aa8.09□□□□□ -1.11
HDAC5-201ENST00000225983 SPENQ96T58 3664 aaKnown RBP8.08□□□□□ -1.12
HDAC5-201ENST00000225983 KRTAP12-2P59991 146 aa8□□□□□ -1.13
HDAC5-201ENST00000225983 KRTAP3-1Q9BYR8 98 aa7.97□□□□□ -1.13
HDAC5-201ENST00000225983 FBN3Q75N90 2809 aa7.94□□□□□ -1.14
HDAC5-201ENST00000225983 TRRAPQ9Y4A5 3859 aa7.93□□□□□ -1.14
HDAC5-201ENST00000225983 SRRM2Q9UQ35 2752 aaKnown RBP7.89□□□□□ -1.15
HDAC5-201ENST00000225983 BSNQ9UPA5 3926 aa7.87□□□□□ -1.15
HDAC5-201ENST00000225983 KRTAP12-1P59990 96 aa7.83□□□□□ -1.16
HDAC5-201ENST00000225983 PRO2289Q9P1D8 64 aa7.83□□□□□ -1.16
HDAC5-201ENST00000225983 MEGF8Q7Z7M0 2845 aa7.79□□□□□ -1.16
HDAC5-201ENST00000225983 KRTAP13-4Q3LI77 160 aa7.74□□□□□ -1.17
HDAC5-201ENST00000225983 KRTAP10-6P60371 365 aaPredicted RBP7.69□□□□□ -1.18
HDAC5-201ENST00000225983 COL7A1Q02388 2944 aa7.69□□□□□ -1.18
HDAC5-201ENST00000225983 VPS13CQ709C8 3753 aa7.65□□□□□ -1.18
HDAC5-201ENST00000225983 HUWE1Q7Z6Z7 4374 aaKnown RBP7.64□□□□□ -1.19
HDAC5-201ENST00000225983 MT1HL1P0DM35 61 aa7.54□□□□□ -1.2
HDAC5-201ENST00000225983 KRTAP3-3Q9BYR6 98 aa7.46□□□□□ -1.22
HDAC5-201ENST00000225983 KRTAP3-2Q9BYR7 98 aa7.44□□□□□ -1.22
HDAC5-201ENST00000225983 KRTAP10-4P60372 401 aaPredicted RBP7.43□□□□□ -1.22
HDAC5-201ENST00000225983 CSMD3Q7Z407 3707 aa7.38□□□□□ -1.23
HDAC5-201ENST00000225983 KRTAP4-5Q9BYR2 181 aa7.34□□□□□ -1.23
HDAC5-201ENST00000225983 KRTAP15-1Q3LI76 137 aa7.33□□□□□ -1.24
HDAC5-201ENST00000225983 ZNF469Q96JG9 3925 aaPredicted RBP7.3□□□□□ -1.24
HDAC5-201ENST00000225983 DNAH9Q9NYC9 4486 aa7.23□□□□□ -1.25
HDAC5-201ENST00000225983 AKAP9Q99996 3911 aa7.22□□□□□ -1.25
HDAC5-201ENST00000225983 ALMS1Q8TCU4 4167 aa7.2□□□□□ -1.26
HDAC5-201ENST00000225983 DNAH5Q8TE73 4624 aa7.12□□□□□ -1.27
HDAC5-201ENST00000225983 DNAH1Q9P2D7 4330 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms