RNA–Protein interactions for RNA: ENST00000225308.12

SLC25A39-201, Transcript of solute carrier family 25 member 39, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC25A39, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A39-201ENST00000225308 Q6ZVQ6 151 aa11.81□□□□□ -0.52
SLC25A39-201ENST00000225308 DEFB116Q30KQ4 102 aa11.79□□□□□ -0.52
SLC25A39-201ENST00000225308 SIGMAR1Q99720 223 aa11.78□□□□□ -0.52
SLC25A39-201ENST00000225308 IGKV4-1P06312 121 aa11.77□□□□□ -0.53
SLC25A39-201ENST00000225308 SEC61BP60468 96 aaKnown RBP11.77□□□□□ -0.53
SLC25A39-201ENST00000225308 SCGB1A1P11684 91 aa11.75□□□□□ -0.53
SLC25A39-201ENST00000225308 J3KT08 172 aa11.72□□□□□ -0.53
SLC25A39-201ENST00000225308 BPY2O14599 106 aa11.7□□□□□ -0.54
SLC25A39-201ENST00000225308 RPL37P61927 97 aaKnown RBP11.69□□□□□ -0.54
SLC25A39-201ENST00000225308 PCOTHQ58A44 107 aa11.66□□□□□ -0.54
SLC25A39-201ENST00000225308 KRTAP4-1Q9BYQ7 146 aa11.66□□□□□ -0.54
SLC25A39-201ENST00000225308 DSCR10P59022 87 aa11.65□□□□□ -0.54
SLC25A39-201ENST00000225308 A8MWP4 228 aa11.64□□□□□ -0.55
SLC25A39-201ENST00000225308 LINC00643Q86TS7 51 aa11.63□□□□□ -0.55
SLC25A39-201ENST00000225308 NDUFB1O75438 58 aa11.62□□□□□ -0.55
SLC25A39-201ENST00000225308 CXCL6P80162 114 aa11.62□□□□□ -0.55
SLC25A39-201ENST00000225308 Q75L30 129 aa11.62□□□□□ -0.55
SLC25A39-201ENST00000225308 NOTCH2NLQ7Z3S9 236 aa11.62□□□□□ -0.55
SLC25A39-201ENST00000225308 IGHV6-1A0A0B4J1U7 121 aa11.61□□□□□ -0.55
SLC25A39-201ENST00000225308 A0A1B0GVX0 72 aa11.6□□□□□ -0.55
SLC25A39-201ENST00000225308 LINC00313P59037 77 aa11.6□□□□□ -0.55
SLC25A39-201ENST00000225308 IGKV3D-7A0A0C4DH55 119 aa11.6□□□□□ -0.55
SLC25A39-201ENST00000225308 C20orf166-AS1Q96NR2 134 aa11.59□□□□□ -0.55
SLC25A39-201ENST00000225308 ATP5EP2Q5VTU8 51 aa11.58□□□□□ -0.56
SLC25A39-201ENST00000225308 KRTAP16-1A8MUX0 517 aa11.57□□□□□ -0.56
SLC25A39-201ENST00000225308 K7EQZ3 153 aa11.57□□□□□ -0.56
SLC25A39-201ENST00000225308 PRR15Q8IV56 129 aa11.57□□□□□ -0.56
SLC25A39-201ENST00000225308 A8MUU9 505 aa11.57□□□□□ -0.56
SLC25A39-201ENST00000225308 Q8N9L7 120 aa11.56□□□□□ -0.56
SLC25A39-201ENST00000225308 C8orf87E5RJ46 101 aa11.53□□□□□ -0.56
SLC25A39-201ENST00000225308 ATP11AUNQ6ZP68 121 aa11.49□□□□□ -0.57
SLC25A39-201ENST00000225308 A0A0U1RQV1 116 aa11.49□□□□□ -0.57
SLC25A39-201ENST00000225308 C8orf17Q9NRJ1 99 aa11.48□□□□□ -0.57
SLC25A39-201ENST00000225308 FAT4Q6V0I7 4981 aa11.45□□□□□ -0.58
SLC25A39-201ENST00000225308 HIST1H4AP62805 103 aaKnown RBP11.45□□□□□ -0.58
SLC25A39-201ENST00000225308 MMP24-AS1A0A0U1RRL7 71 aa11.43□□□□□ -0.58
SLC25A39-201ENST00000225308 MT-ATP8P03928 68 aa11.42□□□□□ -0.58
SLC25A39-201ENST00000225308 hDV103S1A0JD37 113 aa11.38□□□□□ -0.59
SLC25A39-201ENST00000225308 HCG22E2RYF7 251 aa11.38□□□□□ -0.59
SLC25A39-201ENST00000225308 WFDC13Q8IUB5 93 aa11.38□□□□□ -0.59
SLC25A39-201ENST00000225308 CASC2Q6XLA1 102 aa11.36□□□□□ -0.59
SLC25A39-201ENST00000225308 A0A087WVE0 104 aa11.35□□□□□ -0.59
SLC25A39-201ENST00000225308 Q8N9P0 234 aaPredicted RBP11.35□□□□□ -0.59
SLC25A39-201ENST00000225308 TMEM254Q8TBM7 123 aa11.35□□□□□ -0.59
SLC25A39-201ENST00000225308 KRTAP19-2Q3LHN2 52 aa11.35□□□□□ -0.59
SLC25A39-201ENST00000225308 IMUPQ9GZP8 106 aa11.35□□□□□ -0.59
SLC25A39-201ENST00000225308 MRPL34Q9BQ48 92 aaKnown RBP11.33□□□□□ -0.6
SLC25A39-201ENST00000225308 LCE2AQ5TA79 106 aaPredicted RBP11.3□□□□□ -0.6
SLC25A39-201ENST00000225308 LCE2CQ5TA81 110 aa11.28□□□□□ -0.6
SLC25A39-201ENST00000225308 ZCCHC13Q8WW36 166 aaKnown RBP11.25□□□□□ -0.61
SLC25A39-201ENST00000225308 NDUFS5O43920 106 aa11.23□□□□□ -0.61
SLC25A39-201ENST00000225308 ANAPC13Q9BS18 74 aa11.18□□□□□ -0.62
SLC25A39-201ENST00000225308 FAM236AA0A1B0GUQ0 79 aa11.13□□□□□ -0.63
SLC25A39-201ENST00000225308 FAM236BA0A1B0GV22 79 aa11.13□□□□□ -0.63
SLC25A39-201ENST00000225308 COX6B2Q6YFQ2 88 aa11.13□□□□□ -0.63
SLC25A39-201ENST00000225308 TP53AIP1Q9HCN2 124 aa11.12□□□□□ -0.63
SLC25A39-201ENST00000225308 MT1HP80294 61 aa11.09□□□□□ -0.63
SLC25A39-201ENST00000225308 FLGP20930 4061 aaPredicted RBP11.09□□□□□ -0.63
SLC25A39-201ENST00000225308 HRES1P13985 223 aa11.08□□□□□ -0.64
SLC25A39-201ENST00000225308 SPINK7P58062 85 aa11.07□□□□□ -0.64
SLC25A39-201ENST00000225308 Q5W150 140 aa11.06□□□□□ -0.64
SLC25A39-201ENST00000225308 MPLKIPQ8TAP9 179 aa11.06□□□□□ -0.64
SLC25A39-201ENST00000225308 OCR1Q9BZK8 76 aa11.05□□□□□ -0.64
SLC25A39-201ENST00000225308 UQCRQO14949 82 aa11.02□□□□□ -0.64
SLC25A39-201ENST00000225308 ATOX1O00244 68 aa10.98□□□□□ -0.65
SLC25A39-201ENST00000225308 SMIM20Q8N5G0 67 aa10.97□□□□□ -0.65
SLC25A39-201ENST00000225308 TRAV22A0A0B4J277 110 aa10.96□□□□□ -0.65
SLC25A39-201ENST00000225308 RBM12B-AS1Q9P1G2 102 aa10.95□□□□□ -0.66
SLC25A39-201ENST00000225308 CCDC179H3BU77 68 aa10.93□□□□□ -0.66
SLC25A39-201ENST00000225308 TRAV7A0A075B6U4 112 aa10.92□□□□□ -0.66
SLC25A39-201ENST00000225308 FAM236DA0A1B0GTK5 79 aa10.91□□□□□ -0.66
SLC25A39-201ENST00000225308 FAM236CP0DP71 79 aa10.91□□□□□ -0.66
SLC25A39-201ENST00000225308 H0Y9P7 68 aa10.91□□□□□ -0.66
SLC25A39-201ENST00000225308 C5orf47Q569G3 176 aa10.91□□□□□ -0.66
SLC25A39-201ENST00000225308 IGKV2D-30A0A075B6S6 120 aa10.9□□□□□ -0.66
SLC25A39-201ENST00000225308 IGKV2-30P06310 120 aa10.9□□□□□ -0.66
SLC25A39-201ENST00000225308 SVIPQ8NHG7 77 aa10.9□□□□□ -0.66
SLC25A39-201ENST00000225308 M0R2T5 61 aa10.87□□□□□ -0.67
SLC25A39-201ENST00000225308 C7orf65Q6ZTY9 151 aa10.87□□□□□ -0.67
SLC25A39-201ENST00000225308 MP68P56378 58 aa10.86□□□□□ -0.67
SLC25A39-201ENST00000225308 SERP2Q8N6R1 65 aa10.84□□□□□ -0.67
SLC25A39-201ENST00000225308 LOC101927531A0A1B0GV80 90 aa10.81□□□□□ -0.68
SLC25A39-201ENST00000225308 KRTAP10-6P60371 365 aaPredicted RBP10.81□□□□□ -0.68
SLC25A39-201ENST00000225308 LINC00208Q96KT6 92 aa10.81□□□□□ -0.68
SLC25A39-201ENST00000225308 C1orf64Q8NEQ6 169 aa10.8□□□□□ -0.68
SLC25A39-201ENST00000225308 LORP23490 312 aaPredicted RBP10.8□□□□□ -0.68
SLC25A39-201ENST00000225308 H3BPC8 53 aa10.79□□□□□ -0.68
SLC25A39-201ENST00000225308 CYP4F30PQ9H0H9 118 aa10.77□□□□□ -0.68
SLC25A39-201ENST00000225308 COX7CP15954 63 aa10.74□□□□□ -0.69
SLC25A39-201ENST00000225308 C4orf26Q17RF5 130 aa10.68□□□□□ -0.7
SLC25A39-201ENST00000225308 C20orf197Q8N268 126 aa10.67□□□□□ -0.7
SLC25A39-201ENST00000225308 SNURFQ9Y675 71 aa10.65□□□□□ -0.7
SLC25A39-201ENST00000225308 KLKP1Q107X0 134 aa10.63□□□□□ -0.71
SLC25A39-201ENST00000225308 H1FX-AS1Q4G0G2 97 aa10.62□□□□□ -0.71
SLC25A39-201ENST00000225308 KRTAP9-2Q9BYQ4 174 aa10.61□□□□□ -0.71
SLC25A39-201ENST00000225308 RPS28P62857 69 aaKnown RBP10.58□□□□□ -0.72
SLC25A39-201ENST00000225308 KRTAP9-8Q9BYQ0 159 aa10.57□□□□□ -0.72
SLC25A39-201ENST00000225308 KRTAP3-1Q9BYR8 98 aa10.55□□□□□ -0.72
SLC25A39-201ENST00000225308 TMEM258P61165 79 aa10.54□□□□□ -0.72
SLC25A39-201ENST00000225308 LCE2DQ5TA82 110 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms