RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 NBEAL2Q6ZNJ1 2754 aa5.31□□□□□ -1.56
KNOP1-201ENST00000219837 KRTAP12-1P59990 96 aa5.31□□□□□ -1.56
KNOP1-201ENST00000219837 FRYQ5TBA9 3013 aa5.31□□□□□ -1.56
KNOP1-201ENST00000219837 SETXQ7Z333 2677 aaKnown RBP5.3□□□□□ -1.56
KNOP1-201ENST00000219837 IGSF10Q6WRI0 2623 aa5.28□□□□□ -1.56
KNOP1-201ENST00000219837 VCANP13611 3396 aa5.27□□□□□ -1.57
KNOP1-201ENST00000219837 REV3LO60673 3130 aa5.26□□□□□ -1.57
KNOP1-201ENST00000219837 CRYBG3Q68DQ2 2970 aa5.25□□□□□ -1.57
KNOP1-201ENST00000219837 KALRNO60229 2985 aa5.24□□□□□ -1.57
KNOP1-201ENST00000219837 ZNF292O60281 2723 aa5.23□□□□□ -1.57
KNOP1-201ENST00000219837 ASPMQ8IZT6 3477 aa5.23□□□□□ -1.57
KNOP1-201ENST00000219837 FREM2Q5SZK8 3169 aa5.23□□□□□ -1.57
KNOP1-201ENST00000219837 APCP25054 2843 aa5.21□□□□□ -1.58
KNOP1-201ENST00000219837 VPS13AQ96RL7 3174 aa5.2□□□□□ -1.58
KNOP1-201ENST00000219837 KRTAP3-1Q9BYR8 98 aa5.19□□□□□ -1.58
KNOP1-201ENST00000219837 STAB1Q9NY15 2570 aa5.19□□□□□ -1.58
KNOP1-201ENST00000219837 CRCT1Q9UGL9 99 aa5.19□□□□□ -1.58
KNOP1-201ENST00000219837 CFAP47Q6ZTR5 3102 aa5.19□□□□□ -1.58
KNOP1-201ENST00000219837 COL6A5A8TX70 2615 aa5.18□□□□□ -1.58
KNOP1-201ENST00000219837 UTP20O75691 2785 aaKnown RBP5.18□□□□□ -1.58
KNOP1-201ENST00000219837 SPEGQ15772 3267 aa5.16□□□□□ -1.58
KNOP1-201ENST00000219837 MAP1AP78559 2803 aaPredicted RBP5.16□□□□□ -1.58
KNOP1-201ENST00000219837 ZZEF1O43149 2961 aa5.16□□□□□ -1.58
KNOP1-201ENST00000219837 NBPF19A0A087WUL8 3843 aa5.15□□□□□ -1.58
KNOP1-201ENST00000219837 EYSQ5T1H1 3165 aa5.15□□□□□ -1.58
KNOP1-201ENST00000219837 STAB2Q8WWQ8 2551 aa5.15□□□□□ -1.59
KNOP1-201ENST00000219837 DSPP15924 2871 aaKnown RBP5.15□□□□□ -1.59
KNOP1-201ENST00000219837 ALMS1Q8TCU4 4167 aa5.14□□□□□ -1.59
KNOP1-201ENST00000219837 TNRC18O15417 2968 aaPredicted RBP5.13□□□□□ -1.59
KNOP1-201ENST00000219837 NSD1Q96L73 2696 aaPredicted RBP5.11□□□□□ -1.59
KNOP1-201ENST00000219837 ANK3Q12955 4377 aaKnown RBP5.11□□□□□ -1.59
KNOP1-201ENST00000219837 DCHS1Q96JQ0 3298 aa5.07□□□□□ -1.6
KNOP1-201ENST00000219837 BOD1L1Q8NFC6 3051 aa5.05□□□□□ -1.6
KNOP1-201ENST00000219837 WDFY3Q8IZQ1 3526 aa5.05□□□□□ -1.6
KNOP1-201ENST00000219837 KRTAP10-12P60413 245 aa5.04□□□□□ -1.6
KNOP1-201ENST00000219837 ATMQ13315 3056 aa5.03□□□□□ -1.6
KNOP1-201ENST00000219837 HIVEP1P15822 2718 aa5.02□□□□□ -1.61
KNOP1-201ENST00000219837 KRTAP10-6P60371 365 aaPredicted RBP5.02□□□□□ -1.61
KNOP1-201ENST00000219837 ITPR1Q14643 2758 aa5.01□□□□□ -1.61
KNOP1-201ENST00000219837 MYO15AQ9UKN7 3530 aa5.01□□□□□ -1.61
KNOP1-201ENST00000219837 NOTCH1P46531 2555 aa5.01□□□□□ -1.61
KNOP1-201ENST00000219837 HUWE1Q7Z6Z7 4374 aaKnown RBP4.99□□□□□ -1.61
KNOP1-201ENST00000219837 DMXL2Q8TDJ6 3036 aa4.98□□□□□ -1.61
KNOP1-201ENST00000219837 COL12A1Q99715 3063 aa4.98□□□□□ -1.61
KNOP1-201ENST00000219837 FRYLO94915 3013 aa4.97□□□□□ -1.61
KNOP1-201ENST00000219837 UBR5O95071 2799 aaPredicted RBP4.96□□□□□ -1.62
KNOP1-201ENST00000219837 ADGRG4Q8IZF6 3080 aa4.96□□□□□ -1.62
KNOP1-201ENST00000219837 MT1HL1P0DM35 61 aa4.96□□□□□ -1.62
KNOP1-201ENST00000219837 ZFHX4Q86UP3 3567 aa4.94□□□□□ -1.62
KNOP1-201ENST00000219837 ASH1LQ9NR48 2969 aaKnown RBP4.93□□□□□ -1.62
KNOP1-201ENST00000219837 HRNRQ86YZ3 2850 aaPredicted RBP4.92□□□□□ -1.62
KNOP1-201ENST00000219837 KRTAP4-5Q9BYR2 181 aa4.92□□□□□ -1.62
KNOP1-201ENST00000219837 TENM4Q6N022 2769 aa4.92□□□□□ -1.62
KNOP1-201ENST00000219837 CSMD1Q96PZ7 3565 aa4.91□□□□□ -1.62
KNOP1-201ENST00000219837 INE1O15225 51 aa4.89□□□□□ -1.63
KNOP1-201ENST00000219837 LOC400499M0QZD8 3231 aa4.89□□□□□ -1.63
KNOP1-201ENST00000219837 TACC2O95359 2948 aa4.88□□□□□ -1.63
KNOP1-201ENST00000219837 AKAP9Q99996 3911 aa4.88□□□□□ -1.63
KNOP1-201ENST00000219837 TENM2Q9NT68 2774 aa4.87□□□□□ -1.63
KNOP1-201ENST00000219837 DMXL1Q9Y485 3027 aa4.87□□□□□ -1.63
KNOP1-201ENST00000219837 KRTAP3-3Q9BYR6 98 aa4.86□□□□□ -1.63
KNOP1-201ENST00000219837 LCE3AQ5TA76 89 aa4.84□□□□□ -1.63
KNOP1-201ENST00000219837 NBEAQ8NFP9 2946 aa4.84□□□□□ -1.64
KNOP1-201ENST00000219837 LAMA5O15230 3695 aa4.83□□□□□ -1.64
KNOP1-201ENST00000219837 CELSR1Q9NYQ6 3014 aa4.82□□□□□ -1.64
KNOP1-201ENST00000219837 KRTAP12-3P60328 96 aa4.82□□□□□ -1.64
KNOP1-201ENST00000219837 KRTAP3-2Q9BYR7 98 aa4.82□□□□□ -1.64
KNOP1-201ENST00000219837 TGP01266 2768 aa4.79□□□□□ -1.64
KNOP1-201ENST00000219837 RELNP78509 3460 aa4.78□□□□□ -1.64
KNOP1-201ENST00000219837 KRTAP8-1Q8IUC2 63 aa4.73□□□□□ -1.65
KNOP1-201ENST00000219837 KRTAP10-4P60372 401 aaPredicted RBP4.73□□□□□ -1.65
KNOP1-201ENST00000219837 CELSR2Q9HCU4 2923 aa4.72□□□□□ -1.65
KNOP1-201ENST00000219837 SMG1Q96Q15 3661 aaKnown RBP4.72□□□□□ -1.65
KNOP1-201ENST00000219837 BSNQ9UPA5 3926 aa4.72□□□□□ -1.65
KNOP1-201ENST00000219837 DCHS2Q6V1P9 2916 aa4.71□□□□□ -1.66
KNOP1-201ENST00000219837 KRTAP23-1A1A580 65 aa4.7□□□□□ -1.66
KNOP1-201ENST00000219837 KRTAP10-5P60370 271 aa4.69□□□□□ -1.66
KNOP1-201ENST00000219837 SPENQ96T58 3664 aaKnown RBP4.68□□□□□ -1.66
KNOP1-201ENST00000219837 FBN2P35556 2912 aa4.68□□□□□ -1.66
KNOP1-201ENST00000219837 DMDP11532 3685 aa4.68□□□□□ -1.66
KNOP1-201ENST00000219837 LORP23490 312 aaPredicted RBP4.68□□□□□ -1.66
KNOP1-201ENST00000219837 TENM1Q9UKZ4 2725 aa4.66□□□□□ -1.66
KNOP1-201ENST00000219837 NIPBLQ6KC79 2804 aaeCLIP4.66□□□□□ -1.66
KNOP1-201ENST00000219837 FLNCQ14315 2725 aa4.65□□□□□ -1.67
KNOP1-201ENST00000219837 PDZD2O15018 2839 aa4.63□□□□□ -1.67
KNOP1-201ENST00000219837 NF1P21359 2839 aa4.6□□□□□ -1.67
KNOP1-201ENST00000219837 ZFHX3Q15911 3703 aa4.59□□□□□ -1.67
KNOP1-201ENST00000219837 DNAH3Q8TD57 4116 aa4.57□□□□□ -1.68
KNOP1-201ENST00000219837 VPS13CQ709C8 3753 aa4.57□□□□□ -1.68
KNOP1-201ENST00000219837 SVEP1Q4LDE5 3571 aa4.54□□□□□ -1.68
KNOP1-201ENST00000219837 MXRA5Q9NR99 2828 aa4.53□□□□□ -1.68
KNOP1-201ENST00000219837 ZANQ9Y493 2812 aa4.53□□□□□ -1.68
KNOP1-201ENST00000219837 DNAH9Q9NYC9 4486 aa4.52□□□□□ -1.69
KNOP1-201ENST00000219837 DNAH1Q9P2D7 4330 aa4.52□□□□□ -1.69
KNOP1-201ENST00000219837 DNAH2Q9P225 4427 aa4.51□□□□□ -1.69
KNOP1-201ENST00000219837 TRRAPQ9Y4A5 3859 aa4.51□□□□□ -1.69
KNOP1-201ENST00000219837 MT1HP80294 61 aa4.5□□□□□ -1.69
KNOP1-201ENST00000219837 FBN1P35555 2871 aaKnown RBP4.44□□□□□ -1.7
KNOP1-201ENST00000219837 TENM3Q9P273 2699 aa4.44□□□□□ -1.7
KNOP1-201ENST00000219837 CSMD2Q7Z408 3487 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 308.6 ms