RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 HYDINQ4G0P3 5121 aa9.44□□□□□ -0.9
SNAPC1-201ENST00000216294 CHKB-CPT1BH3BT56 60 aa9.43□□□□□ -0.9
SNAPC1-201ENST00000216294 IGLV5-52A0A0A0MRZ9 124 aa9.42□□□□□ -0.9
SNAPC1-201ENST00000216294 SPANXA2-OT1Q8N9U9 137 aa9.42□□□□□ -0.9
SNAPC1-201ENST00000216294 DNAH5Q8TE73 4624 aa9.42□□□□□ -0.9
SNAPC1-201ENST00000216294 SPAG11AQ6PDA7 123 aa9.39□□□□□ -0.91
SNAPC1-201ENST00000216294 A0A1B0GVX0 72 aa9.38□□□□□ -0.91
SNAPC1-201ENST00000216294 H3BPC8 53 aa9.38□□□□□ -0.91
SNAPC1-201ENST00000216294 IGLV7-46A0A075B6I9 117 aa9.38□□□□□ -0.91
SNAPC1-201ENST00000216294 ASB16-AS1Q495Z4 193 aa9.36□□□□□ -0.91
SNAPC1-201ENST00000216294 LINC00483Q53H64 154 aa9.36□□□□□ -0.91
SNAPC1-201ENST00000216294 CIRBP-AS1Q8TBR5 109 aa9.36□□□□□ -0.91
SNAPC1-201ENST00000216294 Q5W150 140 aa9.35□□□□□ -0.91
SNAPC1-201ENST00000216294 RETNLBQ9BQ08 111 aa9.35□□□□□ -0.91
SNAPC1-201ENST00000216294 CDK2AP2O75956 126 aa9.35□□□□□ -0.91
SNAPC1-201ENST00000216294 PLAC8Q9NZF1 115 aa9.35□□□□□ -0.91
SNAPC1-201ENST00000216294 LRP1BQ9NZR2 4599 aa9.34□□□□□ -0.91
SNAPC1-201ENST00000216294 KRTAP10-2P60368 255 aa9.34□□□□□ -0.91
SNAPC1-201ENST00000216294 SPTSSBQ8NFR3 76 aa9.34□□□□□ -0.91
SNAPC1-201ENST00000216294 FAT2Q9NYQ8 4349 aa9.34□□□□□ -0.91
SNAPC1-201ENST00000216294 MRPL34Q9BQ48 92 aaKnown RBP9.33□□□□□ -0.92
SNAPC1-201ENST00000216294 ZNF861PO60384 105 aa9.32□□□□□ -0.92
SNAPC1-201ENST00000216294 LCA10Q71F78 164 aa9.31□□□□□ -0.92
SNAPC1-201ENST00000216294 V9GYY9 64 aa9.31□□□□□ -0.92
SNAPC1-201ENST00000216294 HRES1P13985 223 aa9.31□□□□□ -0.92
SNAPC1-201ENST00000216294 A6NED7 52 aa9.29□□□□□ -0.92
SNAPC1-201ENST00000216294 LIMD2Q9BT23 127 aa9.29□□□□□ -0.92
SNAPC1-201ENST00000216294 PKD1P98161 4303 aa9.29□□□□□ -0.92
SNAPC1-201ENST00000216294 PMAIP1Q13794 54 aa9.28□□□□□ -0.92
SNAPC1-201ENST00000216294 TP53AIP1Q9HCN2 124 aa9.28□□□□□ -0.92
SNAPC1-201ENST00000216294 PRR26Q8N8Z3 221 aa9.27□□□□□ -0.93
SNAPC1-201ENST00000216294 ZNF706Q9Y5V0 76 aaPredicted RBP9.26□□□□□ -0.93
SNAPC1-201ENST00000216294 SACSQ9NZJ4 4579 aa9.25□□□□□ -0.93
SNAPC1-201ENST00000216294 VPS13BQ7Z7G8 4022 aa9.23□□□□□ -0.93
SNAPC1-201ENST00000216294 IGLV7-43P04211 117 aa9.22□□□□□ -0.93
SNAPC1-201ENST00000216294 SPINK7P58062 85 aa9.21□□□□□ -0.93
SNAPC1-201ENST00000216294 KRTAP10-1P60331 282 aa9.2□□□□□ -0.94
SNAPC1-201ENST00000216294 Q75L30 129 aa9.2□□□□□ -0.94
SNAPC1-201ENST00000216294 LOC101927531A0A1B0GV80 90 aa9.18□□□□□ -0.94
SNAPC1-201ENST00000216294 KRTAP13-3Q3SY46 172 aa9.16□□□□□ -0.94
SNAPC1-201ENST00000216294 SEC61GP60059 68 aa9.16□□□□□ -0.94
SNAPC1-201ENST00000216294 PKHD1P08F94 4074 aa9.15□□□□□ -0.95
SNAPC1-201ENST00000216294 Q6ZSA8 131 aa9.15□□□□□ -0.95
SNAPC1-201ENST00000216294 LINC01558Q9Y6Z2 57 aa9.14□□□□□ -0.95
SNAPC1-201ENST00000216294 KRTAP13-2Q52LG2 175 aa9.11□□□□□ -0.95
SNAPC1-201ENST00000216294 LINC00313P59037 77 aa9.07□□□□□ -0.96
SNAPC1-201ENST00000216294 CDC42SE1Q9NRR8 79 aa9.07□□□□□ -0.96
SNAPC1-201ENST00000216294 ATP11AUNQ6ZP68 121 aa9.04□□□□□ -0.96
SNAPC1-201ENST00000216294 A6NN06 94 aa9.03□□□□□ -0.96
SNAPC1-201ENST00000216294 DYNC1H1Q14204 4646 aaKnown RBP9.01□□□□□ -0.97
SNAPC1-201ENST00000216294 IGKV2D-30A0A075B6S6 120 aa9□□□□□ -0.97
SNAPC1-201ENST00000216294 IGKV2-30P06310 120 aa9□□□□□ -0.97
SNAPC1-201ENST00000216294 SSBP3-AS1Q7Z2R9 100 aa9□□□□□ -0.97
SNAPC1-201ENST00000216294 RYR2Q92736 4967 aa9□□□□□ -0.97
SNAPC1-201ENST00000216294 ACYP2P14621 99 aa8.99□□□□□ -0.97
SNAPC1-201ENST00000216294 KMT2CQ8NEZ4 4911 aaKnown RBP8.99□□□□□ -0.97
SNAPC1-201ENST00000216294 KTN1-AS1Q86SY8 53 aa8.98□□□□□ -0.97
SNAPC1-201ENST00000216294 C8orf87E5RJ46 101 aa8.95□□□□□ -0.98
SNAPC1-201ENST00000216294 DMAC1Q96GE9 116 aa8.95□□□□□ -0.98
SNAPC1-201ENST00000216294 KRTAP16-1A8MUX0 517 aa8.94□□□□□ -0.98
SNAPC1-201ENST00000216294 FAT1Q14517 4588 aa8.93□□□□□ -0.98
SNAPC1-201ENST00000216294 FAM229AH3BQW9 127 aa8.93□□□□□ -0.98
SNAPC1-201ENST00000216294 KRTAP1-4P0C5Y4 121 aa8.92□□□□□ -0.98
SNAPC1-201ENST00000216294 RBM12B-AS1Q9P1G2 102 aa8.92□□□□□ -0.98
SNAPC1-201ENST00000216294 A0A1B0GVY2 172 aa8.9□□□□□ -0.98
SNAPC1-201ENST00000216294 APOBP04114 4563 aaKnown RBP8.9□□□□□ -0.98
SNAPC1-201ENST00000216294 SPINK1P00995 79 aa8.88□□□□□ -0.99
SNAPC1-201ENST00000216294 SMR3BP02814 79 aaPredicted RBP8.88□□□□□ -0.99
SNAPC1-201ENST00000216294 ADM2Q7Z4H4 148 aa8.88□□□□□ -0.99
SNAPC1-201ENST00000216294 A0A1B0GU69 56 aa8.88□□□□□ -0.99
SNAPC1-201ENST00000216294 PLA2G1BP04054 148 aaKnown RBP8.87□□□□□ -0.99
SNAPC1-201ENST00000216294 PRAC1Q96KF2 57 aa8.87□□□□□ -0.99
SNAPC1-201ENST00000216294 Q8N1X5 172 aa8.86□□□□□ -0.99
SNAPC1-201ENST00000216294 C7orf65Q6ZTY9 151 aa8.85□□□□□ -0.99
SNAPC1-201ENST00000216294 TYMSOSQ8TAI1 123 aa8.81□□□□□ -1
SNAPC1-201ENST00000216294 C4orf48Q5BLP8 95 aa8.79□□□□□ -1
SNAPC1-201ENST00000216294 RYR3Q15413 4870 aa8.76□□□□□ -1.01
SNAPC1-201ENST00000216294 C9orf92A6NGG3 77 aa8.76□□□□□ -1.01
SNAPC1-201ENST00000216294 KRTAP10-4P60372 401 aaPredicted RBP8.72□□□□□ -1.01
SNAPC1-201ENST00000216294 MIR22HGQ0VDD5 57 aa8.72□□□□□ -1.01
SNAPC1-201ENST00000216294 SPATA8Q6RVD6 105 aa8.68□□□□□ -1.02
SNAPC1-201ENST00000216294 UQCR11O14957 56 aa8.67□□□□□ -1.02
SNAPC1-201ENST00000216294 LINC00304Q8N9R0 145 aa8.65□□□□□ -1.02
SNAPC1-201ENST00000216294 PKHD1L1Q86WI1 4243 aa8.65□□□□□ -1.03
SNAPC1-201ENST00000216294 LRP1Q07954 4544 aaKnown RBP8.63□□□□□ -1.03
SNAPC1-201ENST00000216294 HSPG2P98160 4391 aa8.62□□□□□ -1.03
SNAPC1-201ENST00000216294 MYCBP2O75592 4640 aa8.61□□□□□ -1.03
SNAPC1-201ENST00000216294 FLG2Q5D862 2391 aaPredicted RBP8.61□□□□□ -1.03
SNAPC1-201ENST00000216294 KRTAP3-1Q9BYR8 98 aa8.56□□□□□ -1.04
SNAPC1-201ENST00000216294 RPS29P62273 56 aaKnown RBP8.53□□□□□ -1.04
SNAPC1-201ENST00000216294 RYR1P21817 5038 aa8.53□□□□□ -1.04
SNAPC1-201ENST00000216294 Q5VSD8 79 aa8.5□□□□□ -1.05
SNAPC1-201ENST00000216294 DMBT1Q9UGM3 2413 aaPredicted RBP8.5□□□□□ -1.05
SNAPC1-201ENST00000216294 CSAG1Q6PB30 78 aa8.49□□□□□ -1.05
SNAPC1-201ENST00000216294 H0YAA0 97 aa8.49□□□□□ -1.05
SNAPC1-201ENST00000216294 TNXBP22105 4242 aa8.47□□□□□ -1.05
SNAPC1-201ENST00000216294 KRTAP17-1Q9BYP8 105 aa8.47□□□□□ -1.05
SNAPC1-201ENST00000216294 KIAA1109Q2LD37 5005 aa8.46□□□□□ -1.06
SNAPC1-201ENST00000216294 FAT3Q8TDW7 4589 aa8.45□□□□□ -1.06
SNAPC1-201ENST00000216294 EPPK1P58107 5090 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms