RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 NDUFS5O43920 106 aa4.64□□□□□ -1.67
HMGXB4-201ENST00000216106 PRR4Q16378 134 aa4.63□□□□□ -1.67
HMGXB4-201ENST00000216106 FAM229BQ4G0N7 80 aa4.63□□□□□ -1.67
HMGXB4-201ENST00000216106 C1orf64Q8NEQ6 169 aa4.63□□□□□ -1.67
HMGXB4-201ENST00000216106 MRPL34Q9BQ48 92 aaKnown RBP4.62□□□□□ -1.67
HMGXB4-201ENST00000216106 DYNC1H1Q14204 4646 aaKnown RBP4.62□□□□□ -1.67
HMGXB4-201ENST00000216106 Q5XG85 94 aa4.62□□□□□ -1.67
HMGXB4-201ENST00000216106 LINC00336Q6ZUF6 198 aa4.62□□□□□ -1.67
HMGXB4-201ENST00000216106 KMT2CQ8NEZ4 4911 aaKnown RBP4.61□□□□□ -1.67
HMGXB4-201ENST00000216106 H3BPC8 53 aa4.61□□□□□ -1.67
HMGXB4-201ENST00000216106 PLA2G1BP04054 148 aaKnown RBP4.61□□□□□ -1.67
HMGXB4-201ENST00000216106 TP53AIP1Q9HCN2 124 aa4.61□□□□□ -1.67
HMGXB4-201ENST00000216106 SMR3BP02814 79 aaPredicted RBP4.61□□□□□ -1.67
HMGXB4-201ENST00000216106 C4orf26Q17RF5 130 aa4.6□□□□□ -1.67
HMGXB4-201ENST00000216106 A0A1B0GVY2 172 aa4.59□□□□□ -1.67
HMGXB4-201ENST00000216106 FP248Q71RG6 208 aaPredicted RBP4.59□□□□□ -1.67
HMGXB4-201ENST00000216106 SMIM26A0A096LP01 95 aa4.59□□□□□ -1.67
HMGXB4-201ENST00000216106 C1orf195Q5TG92 126 aa4.59□□□□□ -1.67
HMGXB4-201ENST00000216106 RYR2Q92736 4967 aa4.59□□□□□ -1.68
HMGXB4-201ENST00000216106 TYMSOSQ8TAI1 123 aa4.59□□□□□ -1.68
HMGXB4-201ENST00000216106 FAT1Q14517 4588 aa4.58□□□□□ -1.68
HMGXB4-201ENST00000216106 APOBP04114 4563 aaKnown RBP4.58□□□□□ -1.68
HMGXB4-201ENST00000216106 PCOTHQ58A44 107 aa4.57□□□□□ -1.68
HMGXB4-201ENST00000216106 CYP4F30PQ9H0H9 118 aa4.57□□□□□ -1.68
HMGXB4-201ENST00000216106 LIMD2Q9BT23 127 aa4.57□□□□□ -1.68
HMGXB4-201ENST00000216106 C8orf87E5RJ46 101 aa4.56□□□□□ -1.68
HMGXB4-201ENST00000216106 C4orf48Q5BLP8 95 aa4.56□□□□□ -1.68
HMGXB4-201ENST00000216106 PRR26Q8N8Z3 221 aa4.56□□□□□ -1.68
HMGXB4-201ENST00000216106 LINC00313P59037 77 aa4.56□□□□□ -1.68
HMGXB4-201ENST00000216106 Q5W150 140 aa4.55□□□□□ -1.68
HMGXB4-201ENST00000216106 SPANXA2-OT1Q8N9U9 137 aa4.55□□□□□ -1.68
HMGXB4-201ENST00000216106 MPLKIPQ8TAP9 179 aa4.55□□□□□ -1.68
HMGXB4-201ENST00000216106 SPINK1P00995 79 aa4.53□□□□□ -1.68
HMGXB4-201ENST00000216106 KRTAP13-3Q3SY46 172 aa4.52□□□□□ -1.69
HMGXB4-201ENST00000216106 LINC00304Q8N9R0 145 aa4.52□□□□□ -1.69
HMGXB4-201ENST00000216106 KRTAP10-4P60372 401 aaPredicted RBP4.52□□□□□ -1.69
HMGXB4-201ENST00000216106 IGLV7-46A0A075B6I9 117 aa4.51□□□□□ -1.69
HMGXB4-201ENST00000216106 RETNLBQ9BQ08 111 aa4.51□□□□□ -1.69
HMGXB4-201ENST00000216106 Q8N9P0 234 aaPredicted RBP4.51□□□□□ -1.69
HMGXB4-201ENST00000216106 KRTAP16-1A8MUX0 517 aa4.5□□□□□ -1.69
HMGXB4-201ENST00000216106 LOC101927531A0A1B0GV80 90 aa4.5□□□□□ -1.69
HMGXB4-201ENST00000216106 FAM229AH3BQW9 127 aa4.48□□□□□ -1.69
HMGXB4-201ENST00000216106 COA5Q86WW8 74 aa4.47□□□□□ -1.69
HMGXB4-201ENST00000216106 SPAG11AQ6PDA7 123 aa4.47□□□□□ -1.69
HMGXB4-201ENST00000216106 PKHD1L1Q86WI1 4243 aa4.47□□□□□ -1.69
HMGXB4-201ENST00000216106 RYR3Q15413 4870 aa4.47□□□□□ -1.69
HMGXB4-201ENST00000216106 RPS29P62273 56 aaKnown RBP4.47□□□□□ -1.69
HMGXB4-201ENST00000216106 Q1T7F1 81 aa4.45□□□□□ -1.7
HMGXB4-201ENST00000216106 PSPHP1O15172 72 aa4.43□□□□□ -1.7
HMGXB4-201ENST00000216106 IGKV2-30P06310 120 aa4.43□□□□□ -1.7
HMGXB4-201ENST00000216106 SVIPQ8NHG7 77 aa4.43□□□□□ -1.7
HMGXB4-201ENST00000216106 HRES1P13985 223 aa4.43□□□□□ -1.7
HMGXB4-201ENST00000216106 HSPG2P98160 4391 aa4.43□□□□□ -1.7
HMGXB4-201ENST00000216106 LRP1Q07954 4544 aaKnown RBP4.42□□□□□ -1.7
HMGXB4-201ENST00000216106 IGKV2D-30A0A075B6S6 120 aa4.42□□□□□ -1.7
HMGXB4-201ENST00000216106 C9orf92A6NGG3 77 aa4.41□□□□□ -1.7
HMGXB4-201ENST00000216106 A8MUN3 132 aa4.4□□□□□ -1.71
HMGXB4-201ENST00000216106 Q5VSD8 79 aa4.4□□□□□ -1.71
HMGXB4-201ENST00000216106 V9GYY9 64 aa4.4□□□□□ -1.71
HMGXB4-201ENST00000216106 BRK1Q8WUW1 75 aa4.39□□□□□ -1.71
HMGXB4-201ENST00000216106 FLG2Q5D862 2391 aaPredicted RBP4.39□□□□□ -1.71
HMGXB4-201ENST00000216106 TNXBP22105 4242 aa4.38□□□□□ -1.71
HMGXB4-201ENST00000216106 DMAC1Q96GE9 116 aa4.38□□□□□ -1.71
HMGXB4-201ENST00000216106 ACYP2P14621 99 aa4.37□□□□□ -1.71
HMGXB4-201ENST00000216106 PRR15LQ9BU68 103 aa4.37□□□□□ -1.71
HMGXB4-201ENST00000216106 Q8N1X5 172 aa4.37□□□□□ -1.71
HMGXB4-201ENST00000216106 Q5VV11 94 aa4.36□□□□□ -1.71
HMGXB4-201ENST00000216106 RYR1P21817 5038 aa4.36□□□□□ -1.71
HMGXB4-201ENST00000216106 KRTAP17-1Q9BYP8 105 aa4.35□□□□□ -1.71
HMGXB4-201ENST00000216106 PRO0628Q9UI54 55 aa4.35□□□□□ -1.71
HMGXB4-201ENST00000216106 C7orf65Q6ZTY9 151 aa4.34□□□□□ -1.71
HMGXB4-201ENST00000216106 C20orf166-AS1Q96NR2 134 aa4.34□□□□□ -1.71
HMGXB4-201ENST00000216106 FAT3Q8TDW7 4589 aa4.34□□□□□ -1.71
HMGXB4-201ENST00000216106 KIAA1109Q2LD37 5005 aa4.34□□□□□ -1.72
HMGXB4-201ENST00000216106 A8MUU9 505 aa4.34□□□□□ -1.72
HMGXB4-201ENST00000216106 CHKB-CPT1BH3BT56 60 aa4.34□□□□□ -1.72
HMGXB4-201ENST00000216106 MYCBP2O75592 4640 aa4.33□□□□□ -1.72
HMGXB4-201ENST00000216106 KRTAP10-8P60410 259 aa4.33□□□□□ -1.72
HMGXB4-201ENST00000216106 LINC01558Q9Y6Z2 57 aa4.32□□□□□ -1.72
HMGXB4-201ENST00000216106 DMBT1Q9UGM3 2413 aaPredicted RBP4.31□□□□□ -1.72
HMGXB4-201ENST00000216106 EPPK1P58107 5090 aaKnown RBP4.3□□□□□ -1.72
HMGXB4-201ENST00000216106 Q75L30 129 aa4.3□□□□□ -1.72
HMGXB4-201ENST00000216106 A8MU10 97 aa4.29□□□□□ -1.72
HMGXB4-201ENST00000216106 A6NED7 52 aa4.27□□□□□ -1.73
HMGXB4-201ENST00000216106 SPINK7P58062 85 aa4.26□□□□□ -1.73
HMGXB4-201ENST00000216106 MT1HL1P0DM35 61 aa4.24□□□□□ -1.73
HMGXB4-201ENST00000216106 J3QL48 77 aa4.23□□□□□ -1.73
HMGXB4-201ENST00000216106 LCA10Q71F78 164 aa4.23□□□□□ -1.73
HMGXB4-201ENST00000216106 KRTAP3-3Q9BYR6 98 aa4.23□□□□□ -1.73
HMGXB4-201ENST00000216106 KRTAP3-2Q9BYR7 98 aa4.23□□□□□ -1.73
HMGXB4-201ENST00000216106 A0A1B0GU69 56 aa4.22□□□□□ -1.73
HMGXB4-201ENST00000216106 ATP11AUNQ6ZP68 121 aa4.21□□□□□ -1.73
HMGXB4-201ENST00000216106 KRTAP3-1Q9BYR8 98 aa4.21□□□□□ -1.73
HMGXB4-201ENST00000216106 XP32Q5T750 250 aa4.21□□□□□ -1.74
HMGXB4-201ENST00000216106 RPL37P61927 97 aaKnown RBP4.2□□□□□ -1.74
HMGXB4-201ENST00000216106 CDC42SE1Q9NRR8 79 aa4.19□□□□□ -1.74
HMGXB4-201ENST00000216106 SPTSSBQ8NFR3 76 aa4.18□□□□□ -1.74
HMGXB4-201ENST00000216106 LCE2DQ5TA82 110 aaPredicted RBP4.18□□□□□ -1.74
HMGXB4-201ENST00000216106 KRTAP4-5Q9BYR2 181 aa4.18□□□□□ -1.74
HMGXB4-201ENST00000216106 COX6B2Q6YFQ2 88 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms