RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 C9orf92A6NGG3 77 aa11.15□□□□□ -0.62
RHBDD3-201ENST00000216085 DEFB116Q30KQ4 102 aa11.15□□□□□ -0.62
RHBDD3-201ENST00000216085 ANAPC13Q9BS18 74 aa11.13□□□□□ -0.63
RHBDD3-201ENST00000216085 UBL5Q9BZL1 73 aa11.1□□□□□ -0.63
RHBDD3-201ENST00000216085 NDUFB1O75438 58 aa11.08□□□□□ -0.64
RHBDD3-201ENST00000216085 IMUPQ9GZP8 106 aa11.08□□□□□ -0.64
RHBDD3-201ENST00000216085 XP32Q5T750 250 aa11.07□□□□□ -0.64
RHBDD3-201ENST00000216085 Q6ZVQ6 151 aa11.05□□□□□ -0.64
RHBDD3-201ENST00000216085 IGHV6-1A0A0B4J1U7 121 aa11.03□□□□□ -0.64
RHBDD3-201ENST00000216085 BPY2O14599 106 aa11.03□□□□□ -0.64
RHBDD3-201ENST00000216085 ATP5EP2Q5VTU8 51 aa11.03□□□□□ -0.64
RHBDD3-201ENST00000216085 A0A1B0GVX0 72 aa11.03□□□□□ -0.64
RHBDD3-201ENST00000216085 A8MWP4 228 aa11.03□□□□□ -0.64
RHBDD3-201ENST00000216085 LINC00313P59037 77 aa11.02□□□□□ -0.65
RHBDD3-201ENST00000216085 C8orf87E5RJ46 101 aa11□□□□□ -0.65
RHBDD3-201ENST00000216085 DSCR10P59022 87 aa11□□□□□ -0.65
RHBDD3-201ENST00000216085 SEC61BP60468 96 aaKnown RBP10.98□□□□□ -0.65
RHBDD3-201ENST00000216085 IGKV3D-7A0A0C4DH55 119 aa10.98□□□□□ -0.65
RHBDD3-201ENST00000216085 UBR4Q5T4S7 5183 aa10.97□□□□□ -0.65
RHBDD3-201ENST00000216085 PRR15Q8IV56 129 aa10.94□□□□□ -0.66
RHBDD3-201ENST00000216085 RPL37P61927 97 aaKnown RBP10.93□□□□□ -0.66
RHBDD3-201ENST00000216085 CXCL6P80162 114 aa10.92□□□□□ -0.66
RHBDD3-201ENST00000216085 Q75L30 129 aa10.9□□□□□ -0.66
RHBDD3-201ENST00000216085 K7EQZ3 153 aa10.9□□□□□ -0.67
RHBDD3-201ENST00000216085 C8orf17Q9NRJ1 99 aa10.89□□□□□ -0.67
RHBDD3-201ENST00000216085 NOTCH2NLQ7Z3S9 236 aa10.88□□□□□ -0.67
RHBDD3-201ENST00000216085 C20orf166-AS1Q96NR2 134 aa10.88□□□□□ -0.67
RHBDD3-201ENST00000216085 CCDC179H3BU77 68 aa10.88□□□□□ -0.67
RHBDD3-201ENST00000216085 HIST1H4AP62805 103 aaKnown RBP10.87□□□□□ -0.67
RHBDD3-201ENST00000216085 FAM236AA0A1B0GUQ0 79 aa10.85□□□□□ -0.67
RHBDD3-201ENST00000216085 FAM236BA0A1B0GV22 79 aa10.85□□□□□ -0.67
RHBDD3-201ENST00000216085 KRTAP16-1A8MUX0 517 aa10.85□□□□□ -0.67
RHBDD3-201ENST00000216085 A8MUU9 505 aa10.85□□□□□ -0.67
RHBDD3-201ENST00000216085 ATP11AUNQ6ZP68 121 aa10.85□□□□□ -0.67
RHBDD3-201ENST00000216085 MUC17Q685J3 4493 aa10.84□□□□□ -0.67
RHBDD3-201ENST00000216085 PCOTHQ58A44 107 aa10.82□□□□□ -0.68
RHBDD3-201ENST00000216085 Q8N9L7 120 aa10.82□□□□□ -0.68
RHBDD3-201ENST00000216085 MMP24-AS1A0A0U1RRL7 71 aa10.8□□□□□ -0.68
RHBDD3-201ENST00000216085 A0A087WVE0 104 aa10.8□□□□□ -0.68
RHBDD3-201ENST00000216085 hDV103S1A0JD37 113 aa10.79□□□□□ -0.68
RHBDD3-201ENST00000216085 TMEM254Q8TBM7 123 aa10.79□□□□□ -0.68
RHBDD3-201ENST00000216085 SMIM20Q8N5G0 67 aa10.77□□□□□ -0.69
RHBDD3-201ENST00000216085 MRPL34Q9BQ48 92 aaKnown RBP10.76□□□□□ -0.69
RHBDD3-201ENST00000216085 ATOX1O00244 68 aa10.75□□□□□ -0.69
RHBDD3-201ENST00000216085 Q8N9P0 234 aaPredicted RBP10.75□□□□□ -0.69
RHBDD3-201ENST00000216085 RNF213Q63HN8 5207 aa10.74□□□□□ -0.69
RHBDD3-201ENST00000216085 CASC2Q6XLA1 102 aa10.74□□□□□ -0.69
RHBDD3-201ENST00000216085 WFDC13Q8IUB5 93 aa10.73□□□□□ -0.69
RHBDD3-201ENST00000216085 HCG22E2RYF7 251 aa10.72□□□□□ -0.69
RHBDD3-201ENST00000216085 NDUFS5O43920 106 aa10.7□□□□□ -0.7
RHBDD3-201ENST00000216085 UQCRQO14949 82 aa10.68□□□□□ -0.7
RHBDD3-201ENST00000216085 ZCCHC13Q8WW36 166 aaKnown RBP10.65□□□□□ -0.71
RHBDD3-201ENST00000216085 A0A0U1RQV1 116 aa10.64□□□□□ -0.71
RHBDD3-201ENST00000216085 MUC2Q02817 5179 aa10.63□□□□□ -0.71
RHBDD3-201ENST00000216085 KRTAP4-1Q9BYQ7 146 aa10.6□□□□□ -0.71
RHBDD3-201ENST00000216085 SERP2Q8N6R1 65 aa10.6□□□□□ -0.71
RHBDD3-201ENST00000216085 COX7CP15954 63 aa10.59□□□□□ -0.71
RHBDD3-201ENST00000216085 RPS28P62857 69 aaKnown RBP10.56□□□□□ -0.72
RHBDD3-201ENST00000216085 TRAV7A0A075B6U4 112 aa10.54□□□□□ -0.72
RHBDD3-201ENST00000216085 TP53AIP1Q9HCN2 124 aa10.53□□□□□ -0.72
RHBDD3-201ENST00000216085 TMEM258P61165 79 aa10.47□□□□□ -0.73
RHBDD3-201ENST00000216085 C5orf47Q569G3 176 aa10.47□□□□□ -0.73
RHBDD3-201ENST00000216085 OCR1Q9BZK8 76 aa10.44□□□□□ -0.74
RHBDD3-201ENST00000216085 SPINK7P58062 85 aa10.44□□□□□ -0.74
RHBDD3-201ENST00000216085 Q5W150 140 aa10.42□□□□□ -0.74
RHBDD3-201ENST00000216085 COX6B2Q6YFQ2 88 aa10.39□□□□□ -0.75
RHBDD3-201ENST00000216085 C7orf65Q6ZTY9 151 aa10.38□□□□□ -0.75
RHBDD3-201ENST00000216085 IGKV2D-30A0A075B6S6 120 aa10.37□□□□□ -0.75
RHBDD3-201ENST00000216085 IGKV2-30P06310 120 aa10.37□□□□□ -0.75
RHBDD3-201ENST00000216085 RBM12B-AS1Q9P1G2 102 aa10.36□□□□□ -0.75
RHBDD3-201ENST00000216085 C20orf197Q8N268 126 aa10.35□□□□□ -0.75
RHBDD3-201ENST00000216085 FAT4Q6V0I7 4981 aa10.34□□□□□ -0.75
RHBDD3-201ENST00000216085 TRAV22A0A0B4J277 110 aa10.34□□□□□ -0.75
RHBDD3-201ENST00000216085 HRES1P13985 223 aa10.32□□□□□ -0.76
RHBDD3-201ENST00000216085 KLKP1Q107X0 134 aa10.31□□□□□ -0.76
RHBDD3-201ENST00000216085 FAM236DA0A1B0GTK5 79 aa10.3□□□□□ -0.76
RHBDD3-201ENST00000216085 FAM236CP0DP71 79 aa10.3□□□□□ -0.76
RHBDD3-201ENST00000216085 CYSTM1Q9H1C7 97 aa10.3□□□□□ -0.76
RHBDD3-201ENST00000216085 KRTAP19-2Q3LHN2 52 aa10.28□□□□□ -0.76
RHBDD3-201ENST00000216085 MPLKIPQ8TAP9 179 aa10.26□□□□□ -0.77
RHBDD3-201ENST00000216085 H0Y9P7 68 aa10.24□□□□□ -0.77
RHBDD3-201ENST00000216085 SNURFQ9Y675 71 aa10.24□□□□□ -0.77
RHBDD3-201ENST00000216085 LOC101927531A0A1B0GV80 90 aa10.23□□□□□ -0.77
RHBDD3-201ENST00000216085 NDUFC1O43677 76 aa10.23□□□□□ -0.77
RHBDD3-201ENST00000216085 LCE2CQ5TA81 110 aa10.22□□□□□ -0.77
RHBDD3-201ENST00000216085 MP68P56378 58 aa10.21□□□□□ -0.77
RHBDD3-201ENST00000216085 H3BPC8 53 aa10.18□□□□□ -0.78
RHBDD3-201ENST00000216085 H7BZZ5 65 aa10.17□□□□□ -0.78
RHBDD3-201ENST00000216085 CYP4F30PQ9H0H9 118 aa10.15□□□□□ -0.78
RHBDD3-201ENST00000216085 SERP1Q9Y6X1 66 aa10.14□□□□□ -0.79
RHBDD3-201ENST00000216085 LCE2AQ5TA79 106 aaPredicted RBP10.14□□□□□ -0.79
RHBDD3-201ENST00000216085 C1orf64Q8NEQ6 169 aa10.14□□□□□ -0.79
RHBDD3-201ENST00000216085 MT1HP80294 61 aa10.12□□□□□ -0.79
RHBDD3-201ENST00000216085 LINC00208Q96KT6 92 aa10.12□□□□□ -0.79
RHBDD3-201ENST00000216085 FLGP20930 4061 aaPredicted RBP10.11□□□□□ -0.79
RHBDD3-201ENST00000216085 C4orf26Q17RF5 130 aa10.11□□□□□ -0.79
RHBDD3-201ENST00000216085 M0R2T5 61 aa10.09□□□□□ -0.79
RHBDD3-201ENST00000216085 ATP5EP56381 51 aaPredicted RBP10.06□□□□□ -0.8
RHBDD3-201ENST00000216085 H1FX-AS1Q4G0G2 97 aa10.02□□□□□ -0.81
RHBDD3-201ENST00000216085 SMIM26A0A096LP01 95 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms