RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 NDUFB1O75438 58 aa9.34□□□□□ -0.91
POLR2E-201ENST00000215587 A8MWP4 228 aa9.33□□□□□ -0.92
POLR2E-201ENST00000215587 DSCR10P59022 87 aa9.32□□□□□ -0.92
POLR2E-201ENST00000215587 FP248Q71RG6 208 aaPredicted RBP9.32□□□□□ -0.92
POLR2E-201ENST00000215587 K7EQZ3 153 aa9.29□□□□□ -0.92
POLR2E-201ENST00000215587 A0A1B0GVX0 72 aa9.28□□□□□ -0.92
POLR2E-201ENST00000215587 PRR15Q8IV56 129 aa9.28□□□□□ -0.92
POLR2E-201ENST00000215587 Q8N9L7 120 aa9.28□□□□□ -0.92
POLR2E-201ENST00000215587 IGHV6-1A0A0B4J1U7 121 aa9.27□□□□□ -0.93
POLR2E-201ENST00000215587 MT-ATP8P03928 68 aa9.27□□□□□ -0.93
POLR2E-201ENST00000215587 PRR4Q16378 134 aa9.27□□□□□ -0.93
POLR2E-201ENST00000215587 HIST1H4AP62805 103 aaKnown RBP9.26□□□□□ -0.93
POLR2E-201ENST00000215587 IGLV7-46A0A075B6I9 117 aa9.25□□□□□ -0.93
POLR2E-201ENST00000215587 C8orf87E5RJ46 101 aa9.23□□□□□ -0.93
POLR2E-201ENST00000215587 IMUPQ9GZP8 106 aa9.21□□□□□ -0.94
POLR2E-201ENST00000215587 C8orf17Q9NRJ1 99 aa9.21□□□□□ -0.94
POLR2E-201ENST00000215587 LINC00313P59037 77 aa9.2□□□□□ -0.94
POLR2E-201ENST00000215587 MMP24-AS1A0A0U1RRL7 71 aa9.17□□□□□ -0.94
POLR2E-201ENST00000215587 KRTAP9-2Q9BYQ4 174 aa9.17□□□□□ -0.94
POLR2E-201ENST00000215587 A0A087WVE0 104 aa9.16□□□□□ -0.94
POLR2E-201ENST00000215587 C9orf92A6NGG3 77 aa9.16□□□□□ -0.94
POLR2E-201ENST00000215587 HCG22E2RYF7 251 aa9.16□□□□□ -0.94
POLR2E-201ENST00000215587 NOTCH2NLQ7Z3S9 236 aa9.15□□□□□ -0.94
POLR2E-201ENST00000215587 CASC2Q6XLA1 102 aa9.14□□□□□ -0.95
POLR2E-201ENST00000215587 WFDC13Q8IUB5 93 aa9.14□□□□□ -0.95
POLR2E-201ENST00000215587 hDV103S1A0JD37 113 aa9.13□□□□□ -0.95
POLR2E-201ENST00000215587 KRTAP13-3Q3SY46 172 aa9.13□□□□□ -0.95
POLR2E-201ENST00000215587 TPRXLQ17RH7 258 aa9.12□□□□□ -0.95
POLR2E-201ENST00000215587 TMEM254Q8TBM7 123 aa9.11□□□□□ -0.95
POLR2E-201ENST00000215587 KRTAP9-6A0A140TA67 174 aa9.09□□□□□ -0.95
POLR2E-201ENST00000215587 MRPL34Q9BQ48 92 aaKnown RBP9.08□□□□□ -0.96
POLR2E-201ENST00000215587 KRTAP16-1A8MUX0 517 aa9.07□□□□□ -0.96
POLR2E-201ENST00000215587 FAM236AA0A1B0GUQ0 79 aa9.05□□□□□ -0.96
POLR2E-201ENST00000215587 FAM236BA0A1B0GV22 79 aa9.05□□□□□ -0.96
POLR2E-201ENST00000215587 NDUFS5O43920 106 aa9.03□□□□□ -0.96
POLR2E-201ENST00000215587 SCGB1A1P11684 91 aa9.03□□□□□ -0.96
POLR2E-201ENST00000215587 XP32Q5T750 250 aa9.02□□□□□ -0.97
POLR2E-201ENST00000215587 Q8N9P0 234 aaPredicted RBP9□□□□□ -0.97
POLR2E-201ENST00000215587 C20orf166-AS1Q96NR2 134 aa9□□□□□ -0.97
POLR2E-201ENST00000215587 A8MUU9 505 aa8.99□□□□□ -0.97
POLR2E-201ENST00000215587 Q75L30 129 aa8.98□□□□□ -0.97
POLR2E-201ENST00000215587 FAT4Q6V0I7 4981 aa8.97□□□□□ -0.97
POLR2E-201ENST00000215587 ATOX1O00244 68 aa8.95□□□□□ -0.98
POLR2E-201ENST00000215587 TP53AIP1Q9HCN2 124 aa8.95□□□□□ -0.98
POLR2E-201ENST00000215587 RPL37P61927 97 aaKnown RBP8.94□□□□□ -0.98
POLR2E-201ENST00000215587 SMIM20Q8N5G0 67 aa8.92□□□□□ -0.98
POLR2E-201ENST00000215587 MUC2Q02817 5179 aa8.92□□□□□ -0.98
POLR2E-201ENST00000215587 LPAP08519 4548 aa8.91□□□□□ -0.98
POLR2E-201ENST00000215587 UQCRQO14949 82 aa8.9□□□□□ -0.98
POLR2E-201ENST00000215587 OCR1Q9BZK8 76 aa8.9□□□□□ -0.98
POLR2E-201ENST00000215587 ATP11AUNQ6ZP68 121 aa8.89□□□□□ -0.99
POLR2E-201ENST00000215587 ZCCHC13Q8WW36 166 aaKnown RBP8.88□□□□□ -0.99
POLR2E-201ENST00000215587 TRAV7A0A075B6U4 112 aa8.86□□□□□ -0.99
POLR2E-201ENST00000215587 A0A0U1RQV1 116 aa8.85□□□□□ -0.99
POLR2E-201ENST00000215587 TRAV22A0A0B4J277 110 aa8.84□□□□□ -0.99
POLR2E-201ENST00000215587 SEC61BP60468 96 aaKnown RBP8.84□□□□□ -0.99
POLR2E-201ENST00000215587 Q5W150 140 aa8.82□□□□□ -1
POLR2E-201ENST00000215587 SERP2Q8N6R1 65 aa8.82□□□□□ -1
POLR2E-201ENST00000215587 H0Y9P7 68 aa8.81□□□□□ -1
POLR2E-201ENST00000215587 PCOTHQ58A44 107 aa8.81□□□□□ -1
POLR2E-201ENST00000215587 ANAPC13Q9BS18 74 aa8.8□□□□□ -1
POLR2E-201ENST00000215587 MP68P56378 58 aa8.79□□□□□ -1
POLR2E-201ENST00000215587 C5orf47Q569G3 176 aa8.79□□□□□ -1
POLR2E-201ENST00000215587 LCE2AQ5TA79 106 aaPredicted RBP8.76□□□□□ -1.01
POLR2E-201ENST00000215587 H3BPC8 53 aa8.73□□□□□ -1.01
POLR2E-201ENST00000215587 LOC101927531A0A1B0GV80 90 aa8.72□□□□□ -1.01
POLR2E-201ENST00000215587 COX7CP15954 63 aa8.72□□□□□ -1.01
POLR2E-201ENST00000215587 LINC00208Q96KT6 92 aa8.72□□□□□ -1.01
POLR2E-201ENST00000215587 IGKV2D-30A0A075B6S6 120 aa8.71□□□□□ -1.02
POLR2E-201ENST00000215587 IGKV2-30P06310 120 aa8.71□□□□□ -1.02
POLR2E-201ENST00000215587 C1orf64Q8NEQ6 169 aa8.71□□□□□ -1.02
POLR2E-201ENST00000215587 C7orf65Q6ZTY9 151 aa8.7□□□□□ -1.02
POLR2E-201ENST00000215587 PCP4P48539 62 aa8.68□□□□□ -1.02
POLR2E-201ENST00000215587 SPINK7P58062 85 aa8.67□□□□□ -1.02
POLR2E-201ENST00000215587 C20orf197Q8N268 126 aa8.67□□□□□ -1.02
POLR2E-201ENST00000215587 FSIP2Q5CZC0 6907 aa8.63□□□□□ -1.03
POLR2E-201ENST00000215587 CYP4F30PQ9H0H9 118 aa8.63□□□□□ -1.03
POLR2E-201ENST00000215587 SNURFQ9Y675 71 aa8.62□□□□□ -1.03
POLR2E-201ENST00000215587 KLKP1Q107X0 134 aa8.59□□□□□ -1.03
POLR2E-201ENST00000215587 CCDC179H3BU77 68 aa8.57□□□□□ -1.04
POLR2E-201ENST00000215587 KRTAP4-1Q9BYQ7 146 aa8.57□□□□□ -1.04
POLR2E-201ENST00000215587 CRCT1Q9UGL9 99 aa8.56□□□□□ -1.04
POLR2E-201ENST00000215587 MUC17Q685J3 4493 aa8.56□□□□□ -1.04
POLR2E-201ENST00000215587 HRES1P13985 223 aa8.52□□□□□ -1.05
POLR2E-201ENST00000215587 NDUFC1O43677 76 aa8.5□□□□□ -1.05
POLR2E-201ENST00000215587 LCE2DQ5TA82 110 aaPredicted RBP8.5□□□□□ -1.05
POLR2E-201ENST00000215587 RBM12B-AS1Q9P1G2 102 aa8.48□□□□□ -1.05
POLR2E-201ENST00000215587 C4orf26Q17RF5 130 aa8.47□□□□□ -1.05
POLR2E-201ENST00000215587 CYSTM1Q9H1C7 97 aa8.45□□□□□ -1.06
POLR2E-201ENST00000215587 MPLKIPQ8TAP9 179 aa8.44□□□□□ -1.06
POLR2E-201ENST00000215587 H7BZZ5 65 aa8.43□□□□□ -1.06
POLR2E-201ENST00000215587 FAM236DA0A1B0GTK5 79 aa8.42□□□□□ -1.06
POLR2E-201ENST00000215587 FAM236CP0DP71 79 aa8.42□□□□□ -1.06
POLR2E-201ENST00000215587 COX6B2Q6YFQ2 88 aa8.42□□□□□ -1.06
POLR2E-201ENST00000215587 SPANXA2-OT1Q8N9U9 137 aa8.39□□□□□ -1.07
POLR2E-201ENST00000215587 A8MUN3 132 aa8.34□□□□□ -1.07
POLR2E-201ENST00000215587 DMAC1Q96GE9 116 aa8.32□□□□□ -1.08
POLR2E-201ENST00000215587 TMEM258P61165 79 aa8.31□□□□□ -1.08
POLR2E-201ENST00000215587 KRTAP3-1Q9BYR8 98 aa8.31□□□□□ -1.08
POLR2E-201ENST00000215587 H1FX-AS1Q4G0G2 97 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms