RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 TRAV22A0A0B4J277 110 aa6.43□□□□□ -1.38
CD4-201ENST00000011653 DEFB116Q30KQ4 102 aa6.42□□□□□ -1.38
CD4-201ENST00000011653 FAT1Q14517 4588 aa6.42□□□□□ -1.38
CD4-201ENST00000011653 CHKB-CPT1BH3BT56 60 aa6.41□□□□□ -1.38
CD4-201ENST00000011653 LINC00313P59037 77 aa6.41□□□□□ -1.38
CD4-201ENST00000011653 WFDC13Q8IUB5 93 aa6.41□□□□□ -1.38
CD4-201ENST00000011653 EPPK1P58107 5090 aaKnown RBP6.41□□□□□ -1.38
CD4-201ENST00000011653 FLG2Q5D862 2391 aaPredicted RBP6.4□□□□□ -1.39
CD4-201ENST00000011653 hDV103S1A0JD37 113 aa6.4□□□□□ -1.39
CD4-201ENST00000011653 ADM2Q7Z4H4 148 aa6.39□□□□□ -1.39
CD4-201ENST00000011653 Q75L30 129 aa6.39□□□□□ -1.39
CD4-201ENST00000011653 MP68P56378 58 aa6.39□□□□□ -1.39
CD4-201ENST00000011653 NDUFB1O75438 58 aa6.38□□□□□ -1.39
CD4-201ENST00000011653 IGLV7-43P04211 117 aa6.38□□□□□ -1.39
CD4-201ENST00000011653 LCA10Q71F78 164 aa6.38□□□□□ -1.39
CD4-201ENST00000011653 VPS13BQ7Z7G8 4022 aa6.38□□□□□ -1.39
CD4-201ENST00000011653 H0Y9J4 135 aa6.37□□□□□ -1.39
CD4-201ENST00000011653 SPRR1BP22528 89 aa6.37□□□□□ -1.39
CD4-201ENST00000011653 C1orf64Q8NEQ6 169 aa6.37□□□□□ -1.39
CD4-201ENST00000011653 RPL37AP61513 92 aaKnown RBP6.37□□□□□ -1.39
CD4-201ENST00000011653 ZNF861PO60384 105 aa6.36□□□□□ -1.39
CD4-201ENST00000011653 KIAA1109Q2LD37 5005 aa6.36□□□□□ -1.39
CD4-201ENST00000011653 IGLV9-49A0A0B4J1Y8 123 aa6.36□□□□□ -1.39
CD4-201ENST00000011653 CYP4F30PQ9H0H9 118 aa6.36□□□□□ -1.39
CD4-201ENST00000011653 APOBP04114 4563 aaKnown RBP6.35□□□□□ -1.39
CD4-201ENST00000011653 CASC2Q6XLA1 102 aa6.35□□□□□ -1.39
CD4-201ENST00000011653 KRTAP29-1A8MX34 341 aaPredicted RBP6.34□□□□□ -1.39
CD4-201ENST00000011653 C7orf65Q6ZTY9 151 aa6.34□□□□□ -1.39
CD4-201ENST00000011653 PLA2G1BP04054 148 aaKnown RBP6.34□□□□□ -1.4
CD4-201ENST00000011653 LINC00208Q96KT6 92 aa6.34□□□□□ -1.4
CD4-201ENST00000011653 A6NN06 94 aa6.33□□□□□ -1.4
CD4-201ENST00000011653 A8MWP4 228 aa6.33□□□□□ -1.4
CD4-201ENST00000011653 KRTAP13-1Q8IUC0 172 aa6.33□□□□□ -1.4
CD4-201ENST00000011653 H0Y9P7 68 aa6.32□□□□□ -1.4
CD4-201ENST00000011653 LINC00472Q9H8W2 130 aa6.32□□□□□ -1.4
CD4-201ENST00000011653 H3BPC8 53 aa6.32□□□□□ -1.4
CD4-201ENST00000011653 LINC01554Q52M75 96 aa6.32□□□□□ -1.4
CD4-201ENST00000011653 Q1T7F1 81 aa6.31□□□□□ -1.4
CD4-201ENST00000011653 Q5VV11 94 aa6.31□□□□□ -1.4
CD4-201ENST00000011653 A6NED7 52 aa6.3□□□□□ -1.4
CD4-201ENST00000011653 FAM229AH3BQW9 127 aa6.29□□□□□ -1.4
CD4-201ENST00000011653 PRR15LQ9BU68 103 aa6.29□□□□□ -1.4
CD4-201ENST00000011653 MOBPQ13875 183 aa6.28□□□□□ -1.4
CD4-201ENST00000011653 SPANXA2-OT1Q8N9U9 137 aa6.28□□□□□ -1.4
CD4-201ENST00000011653 Q5VSD8 79 aa6.28□□□□□ -1.4
CD4-201ENST00000011653 MMP24-AS1A0A0U1RRL7 71 aa6.25□□□□□ -1.41
CD4-201ENST00000011653 HSPG2P98160 4391 aa6.25□□□□□ -1.41
CD4-201ENST00000011653 RYR1P21817 5038 aa6.25□□□□□ -1.41
CD4-201ENST00000011653 KRTAP17-1Q9BYP8 105 aa6.25□□□□□ -1.41
CD4-201ENST00000011653 A0A087X002 238 aa6.24□□□□□ -1.41
CD4-201ENST00000011653 DMBT1Q9UGM3 2413 aaPredicted RBP6.23□□□□□ -1.41
CD4-201ENST00000011653 ATP11AUNQ6ZP68 121 aa6.23□□□□□ -1.41
CD4-201ENST00000011653 CDK2AP2O75956 126 aa6.23□□□□□ -1.41
CD4-201ENST00000011653 Q96NJ1 140 aa6.2□□□□□ -1.42
CD4-201ENST00000011653 TP53AIP1Q9HCN2 124 aa6.2□□□□□ -1.42
CD4-201ENST00000011653 LINC00483Q53H64 154 aa6.2□□□□□ -1.42
CD4-201ENST00000011653 SPINK6Q6UWN8 80 aa6.2□□□□□ -1.42
CD4-201ENST00000011653 RETNLBQ9BQ08 111 aa6.19□□□□□ -1.42
CD4-201ENST00000011653 KRTAP10-4P60372 401 aaPredicted RBP6.19□□□□□ -1.42
CD4-201ENST00000011653 C8orf17Q9NRJ1 99 aa6.19□□□□□ -1.42
CD4-201ENST00000011653 IGHV6-1A0A0B4J1U7 121 aa6.18□□□□□ -1.42
CD4-201ENST00000011653 KRTAP1-4P0C5Y4 121 aa6.18□□□□□ -1.42
CD4-201ENST00000011653 LRP1Q07954 4544 aaKnown RBP6.18□□□□□ -1.42
CD4-201ENST00000011653 ASB16-AS1Q495Z4 193 aa6.18□□□□□ -1.42
CD4-201ENST00000011653 KRTAP13-2Q52LG2 175 aa6.18□□□□□ -1.42
CD4-201ENST00000011653 IGLV7-46A0A075B6I9 117 aa6.17□□□□□ -1.42
CD4-201ENST00000011653 TYMSOSQ8TAI1 123 aa6.17□□□□□ -1.42
CD4-201ENST00000011653 LIMD2Q9BT23 127 aa6.17□□□□□ -1.42
CD4-201ENST00000011653 KRTAP4-5Q9BYR2 181 aa6.16□□□□□ -1.42
CD4-201ENST00000011653 MYCBP2O75592 4640 aa6.16□□□□□ -1.42
CD4-201ENST00000011653 A0A1B0GVX0 72 aa6.16□□□□□ -1.42
CD4-201ENST00000011653 Q8N9P0 234 aaPredicted RBP6.16□□□□□ -1.42
CD4-201ENST00000011653 PCOTHQ58A44 107 aa6.15□□□□□ -1.43
CD4-201ENST00000011653 COA5Q86WW8 74 aa6.15□□□□□ -1.43
CD4-201ENST00000011653 Q8N1X5 172 aa6.15□□□□□ -1.43
CD4-201ENST00000011653 MRPL34Q9BQ48 92 aaKnown RBP6.12□□□□□ -1.43
CD4-201ENST00000011653 BIRC6Q9NR09 4857 aa6.11□□□□□ -1.43
CD4-201ENST00000011653 SSBP3-AS1Q7Z2R9 100 aa6.09□□□□□ -1.43
CD4-201ENST00000011653 LOC101927531A0A1B0GV80 90 aa6.07□□□□□ -1.44
CD4-201ENST00000011653 SPINK7P58062 85 aa6.07□□□□□ -1.44
CD4-201ENST00000011653 LINC00304Q8N9R0 145 aa6.07□□□□□ -1.44
CD4-201ENST00000011653 CSAG1Q6PB30 78 aa6.06□□□□□ -1.44
CD4-201ENST00000011653 CDC42SE1Q9NRR8 79 aa6.06□□□□□ -1.44
CD4-201ENST00000011653 SEC61BP60468 96 aaKnown RBP6.06□□□□□ -1.44
CD4-201ENST00000011653 NOTCH2NLQ7Z3S9 236 aa6.06□□□□□ -1.44
CD4-201ENST00000011653 ABCA13Q86UQ4 5058 aa6.04□□□□□ -1.44
CD4-201ENST00000011653 HRES1P13985 223 aa6.03□□□□□ -1.44
CD4-201ENST00000011653 SPAG11AQ6PDA7 123 aa6.03□□□□□ -1.44
CD4-201ENST00000011653 HERC2O95714 4834 aa6.02□□□□□ -1.44
CD4-201ENST00000011653 LINC01558Q9Y6Z2 57 aa6.02□□□□□ -1.45
CD4-201ENST00000011653 PKHD1L1Q86WI1 4243 aa6.02□□□□□ -1.45
CD4-201ENST00000011653 Q5W150 140 aa5.99□□□□□ -1.45
CD4-201ENST00000011653 KRTAP13-3Q3SY46 172 aa5.98□□□□□ -1.45
CD4-201ENST00000011653 SPINK1P00995 79 aa5.98□□□□□ -1.45
CD4-201ENST00000011653 FAT3Q8TDW7 4589 aa5.97□□□□□ -1.45
CD4-201ENST00000011653 KRTAP10-8P60410 259 aa5.95□□□□□ -1.46
CD4-201ENST00000011653 KRTAP16-1A8MUX0 517 aa5.94□□□□□ -1.46
CD4-201ENST00000011653 ACYP2P14621 99 aa5.94□□□□□ -1.46
CD4-201ENST00000011653 MT1HL1P0DM35 61 aa5.94□□□□□ -1.46
CD4-201ENST00000011653 TNXBP22105 4242 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms