RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Inafm1E9PV59 130 aa11.11□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 BC106179Q8C9L1 186 aa11.11□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Akap6E9Q9K8 2307 aa11.1□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 P01812 117 aa11.1□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Tmem129Q8K304 362 aa11.1□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 PerpQ9JK95 193 aa11.1□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Plscr4P58196 326 aa11.1□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 AmelxP63277 210 aa11.1□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Slc25a48Q8BW66 306 aa11.1□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Med12lQ8BQM9 2157 aa11.1□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Atp6v0e1Q9CQD8 81 aa11.1□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Tmem190Q9D2E9 166 aa11.1□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 CklfQ9DAS1 152 aa11.1□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Notch4P31695 1964 aa11.1□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Trav12-3A0A075B648 115 aa11.1□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Trav6d-7A0A075B6B0 112 aa11.1□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Vmn1r1E9PVR6 306 aa11.1□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Tmem88bQ3TYP4 173 aa11.1□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 9130213A22RikQ3V3T2 120 aa11.1□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Mzt1Q8BUR9 78 aa11.1□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Mrpl53Q9D1H8 118 aaKnown RBP11.1□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Avpi1Q9D7H4 142 aa11.1□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 PdpnQ62011 172 aa11.09□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Ovol1Q9WTJ2 267 aa11.09□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Trav6-4A0A075B6B4 115 aa11.09□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Gm37388A0A0A6YY46 143 aa11.09□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Smlr1J3QMJ4 66 aa11.09□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 P04940 107 aa11.09□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 P04941 107 aa11.09□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Ighv3-6P18531 116 aa11.09□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Tmem101Q91VP7 257 aa11.09□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Ighv1-16A0A075B5U1 98 aa11.09□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Tmem238A9JSM3 176 aa11.09□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Gm5129F6YHA9 99 aa11.09□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Foxc2Q61850 494 aa11.09□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Nit2Q9JHW2 276 aa11.09□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Olfr322Q5NCC8 327 aa11.09□□□□□ -0.63
Pcdha1-202ENSMUST00000193839 Ighv1-69A0A0G2JFS5 117 aa11.08□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Gm45521A0A1B0GRK0 198 aa11.08□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Gm26938S4R185 226 aa11.08□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 CrxO54751 299 aa11.08□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 CntfrO88507 372 aa11.08□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 P0C1Z5 52 aa11.08□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Tmem95P0DJF3 176 aa11.08□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Wdr90Q6ZPG2 1874 aa11.08□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Trav7-5A0A0G2JFX6 112 aa11.08□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Tal2Q62282 108 aa11.07□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Rchy1Q9CR50 261 aa11.07□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Uqcrfs1Q9CR68 274 aa11.07□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Gtsf1Q9DAN6 167 aa11.07□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Prpf8Q99PV0 2335 aaKnown RBP11.07□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Fam216bQ8CC14 138 aa11.07□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Dkk4Q8VEJ3 221 aa11.07□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Ly6g5bQ8K1T4 194 aa11.07□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Gpx1P11352 201 aa11.06□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 A930003A15RikQ3U552 87 aa11.06□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Ighv1-55A0A075B5W6 117 aa11.06□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Q4KKZ1 196 aa11.06□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Q9D727 114 aa11.06□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Erdr1J3QMM0 206 aa11.06□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Cd33Q63994 403 aa11.06□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Plac1Q9JI83 173 aa11.06□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Zfp119aQ9JIC0 545 aa11.06□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Dpm2Q9Z324 84 aa11.06□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Ang6Q5GAN0 147 aa11.06□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Olfr211Q8VGH2 309 aa11.06□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Q08AU9 97 aa11.05□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Ighv14-1A0A075B5R4 117 aa11.05□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Trav8-1A0A075B641 109 aa11.05□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Sumo2P61957 95 aaKnown RBP11.05□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Znrd1Q791N7 123 aa11.05□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Ssbp2Q9CYZ8 361 aa11.05□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Abca1P41233 2261 aa11.05□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Ighv1-19A0A0A6YWX0 117 aa11.05□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Mtatp8P03930 67 aa11.05□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 CtsbP10605 339 aa11.05□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Mrpl32Q9DCI9 187 aaKnown RBP11.05□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 AgrnA2ASQ1 1950 aa11.05□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Cox6b1P56391 86 aaKnown RBP11.05□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Arfgef3Q3UGY8 2170 aa11.05□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Trav6n-6A0A075B6B2 114 aa11.04□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Thy1P01831 162 aa11.04□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 SbpP15501 199 aa11.04□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Pla2g2aP31482 146 aa11.04□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Olfr761Q7TRJ0 323 aa11.04□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 F930015N05RikQ8C3A3 210 aa11.04□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Card19Q9D1I2 183 aa11.04□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 MdfiP70331 251 aa11.04□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Mrpl36Q99N90 102 aa11.04□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Gm33815A0A087WNV3 176 aa11.04□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Olfr745Q7TRL9 328 aa11.04□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Cspg4Q8VHY0 2327 aa11.04□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Cela2aP05208 271 aa11.04□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Gm28269A0A087WSG3 125 aa11.03□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Gm10638F6QEG2 257 aa11.03□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Ccl6P27784 116 aa11.03□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 RhohQ9D3G9 191 aa11.03□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Olfr1323Q8VF35 309 aa11.03□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Tmem52Q9D702 196 aa11.03□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Higd1aQ9JLR9 95 aa11.03□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 49.3 ms