RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Trav2Q5R1I9 109 aa12.22□□□□□ -0.45
Trim39-203ENSMUST00000113706 Znf641Q8BZ34 422 aa12.22□□□□□ -0.45
Trim39-203ENSMUST00000113706 Tmem91Q8C581 172 aa12.22□□□□□ -0.45
Trim39-203ENSMUST00000113706 Myo9aQ8C170 2542 aa12.22□□□□□ -0.45
Trim39-203ENSMUST00000113706 Trav6d-7A0A075B6B0 112 aa12.22□□□□□ -0.45
Trim39-203ENSMUST00000113706 Gm20379A0A087WR34 119 aa12.22□□□□□ -0.45
Trim39-203ENSMUST00000113706 Lrcol1Q3URS3 161 aa12.22□□□□□ -0.45
Trim39-203ENSMUST00000113706 Golt1bQ9CR60 138 aa12.22□□□□□ -0.45
Trim39-203ENSMUST00000113706 Socs3O35718 225 aa12.22□□□□□ -0.45
Trim39-203ENSMUST00000113706 Siah2Q06986 325 aa12.22□□□□□ -0.45
Trim39-203ENSMUST00000113706 Gm5868Q8BJG1 145 aa12.22□□□□□ -0.45
Trim39-203ENSMUST00000113706 Bub3Q9WVA3 326 aa12.22□□□□□ -0.45
Trim39-203ENSMUST00000113706 KprpB2RUR4 657 aa12.21□□□□□ -0.45
Trim39-203ENSMUST00000113706 Gm21994F6T2D2 329 aa12.21□□□□□ -0.45
Trim39-203ENSMUST00000113706 Gm10130F6ZHM5 101 aa12.21□□□□□ -0.45
Trim39-203ENSMUST00000113706 Hcfc2Q9D968 241 aa12.21□□□□□ -0.45
Trim39-203ENSMUST00000113706 Scgb1b15A0A087WP50 93 aa12.21□□□□□ -0.46
Trim39-203ENSMUST00000113706 Zfp825A0A1Y7VK00 292 aa12.21□□□□□ -0.46
Trim39-203ENSMUST00000113706 Smad7O35253 426 aa12.21□□□□□ -0.46
Trim39-203ENSMUST00000113706 Fgf5P15656 264 aa12.21□□□□□ -0.46
Trim39-203ENSMUST00000113706 Ifi27Q8C6G0 260 aa12.21□□□□□ -0.46
Trim39-203ENSMUST00000113706 Wfdc15bQ9JHY4 80 aa12.21□□□□□ -0.46
Trim39-203ENSMUST00000113706 CcsQ9WU84 274 aa12.21□□□□□ -0.46
Trim39-203ENSMUST00000113706 Znf48Q3US17 591 aa12.2□□□□□ -0.46
Trim39-203ENSMUST00000113706 Tmem140Q8BGY5 185 aa12.2□□□□□ -0.46
Trim39-203ENSMUST00000113706 A0A286YCQ8 80 aa12.2□□□□□ -0.46
Trim39-203ENSMUST00000113706 Olfr553Q7TRS6 326 aa12.2□□□□□ -0.46
Trim39-203ENSMUST00000113706 TrrapQ80YV3 2565 aaKnown RBP12.2□□□□□ -0.46
Trim39-203ENSMUST00000113706 Igkv4-59A0A0B4J1I8 117 aa12.2□□□□□ -0.46
Trim39-203ENSMUST00000113706 Olfr235E9Q9Z6 312 aa12.2□□□□□ -0.46
Trim39-203ENSMUST00000113706 Gm10226O88253 85 aa12.2□□□□□ -0.46
Trim39-203ENSMUST00000113706 Acrv1P50289 261 aa12.2□□□□□ -0.46
Trim39-203ENSMUST00000113706 Ramp1Q9WTJ5 148 aa12.2□□□□□ -0.46
Trim39-203ENSMUST00000113706 Vmn1r119E9Q4H3 307 aa12.19□□□□□ -0.46
Trim39-203ENSMUST00000113706 Olfr1185-ps1F6XP16 303 aa12.19□□□□□ -0.46
Trim39-203ENSMUST00000113706 Akap6E9Q9K8 2307 aa12.19□□□□□ -0.46
Trim39-203ENSMUST00000113706 Trav14d-1A0A075B6B1 121 aa12.19□□□□□ -0.46
Trim39-203ENSMUST00000113706 Gm10521E9PZK0 135 aa12.19□□□□□ -0.46
Trim39-203ENSMUST00000113706 Zfp867E9Q2M4 473 aa12.19□□□□□ -0.46
Trim39-203ENSMUST00000113706 Fbln7Q501P1 440 aa12.19□□□□□ -0.46
Trim39-203ENSMUST00000113706 Atp6v0bQ91V37 205 aa12.19□□□□□ -0.46
Trim39-203ENSMUST00000113706 ChtopQ9CY57 249 aaKnown RBP12.19□□□□□ -0.46
Trim39-203ENSMUST00000113706 Arl3Q9WUL7 182 aa12.19□□□□□ -0.46
Trim39-203ENSMUST00000113706 Trav14-3A0A075B607 120 aa12.18□□□□□ -0.46
Trim39-203ENSMUST00000113706 Cnn3Q9DAW9 330 aaKnown RBP12.18□□□□□ -0.46
Trim39-203ENSMUST00000113706 Gm15056F6ZR08 88 aa12.18□□□□□ -0.46
Trim39-203ENSMUST00000113706 Tdgf1P51865 171 aa12.18□□□□□ -0.46
Trim39-203ENSMUST00000113706 Pam16Q9CQV1 125 aa12.18□□□□□ -0.46
Trim39-203ENSMUST00000113706 Plpp2Q9DAX2 276 aa12.18□□□□□ -0.46
Trim39-203ENSMUST00000113706 Ighv1-22A0A075B5U7 117 aa12.18□□□□□ -0.46
Trim39-203ENSMUST00000113706 Tcte2E9PY37 120 aa12.18□□□□□ -0.46
Trim39-203ENSMUST00000113706 Cited1P97769 203 aa12.18□□□□□ -0.46
Trim39-203ENSMUST00000113706 Hivep2Q3UHF7 2430 aa12.17□□□□□ -0.46
Trim39-203ENSMUST00000113706 Fam103a1Q9CQY2 119 aaKnown RBP12.17□□□□□ -0.46
Trim39-203ENSMUST00000113706 Fxyd4Q9D2W0 88 aa12.17□□□□□ -0.46
Trim39-203ENSMUST00000113706 DdtO35215 118 aa12.17□□□□□ -0.46
Trim39-203ENSMUST00000113706 Mbd3l2Q3UXB0 228 aa12.17□□□□□ -0.46
Trim39-203ENSMUST00000113706 SnrpcQ62241 159 aa12.17□□□□□ -0.46
Trim39-203ENSMUST00000113706 Usmg5Q78IK2 58 aa12.17□□□□□ -0.46
Trim39-203ENSMUST00000113706 Q9CR34 168 aa12.17□□□□□ -0.46
Trim39-203ENSMUST00000113706 SNORCQ9CXL7 121 aa12.17□□□□□ -0.46
Trim39-203ENSMUST00000113706 GlmpQ9JHJ3 404 aa12.17□□□□□ -0.46
Trim39-203ENSMUST00000113706 Tomm40Q9QYA2 361 aa12.17□□□□□ -0.46
Trim39-203ENSMUST00000113706 Cited2O35740 269 aa12.16□□□□□ -0.46
Trim39-203ENSMUST00000113706 Prrc2aQ7TSC1 2158 aaKnown RBP12.16□□□□□ -0.46
Trim39-203ENSMUST00000113706 A130051J06RikQ8CAU1 227 aa12.16□□□□□ -0.46
Trim39-203ENSMUST00000113706 RnasekQ8K3C0 98 aa12.16□□□□□ -0.46
Trim39-203ENSMUST00000113706 Olfr477Q8VGI6 310 aa12.16□□□□□ -0.46
Trim39-203ENSMUST00000113706 Trav21-dv12A0A075B6C4 109 aa12.16□□□□□ -0.46
Trim39-203ENSMUST00000113706 Gm28051J3QMA2 81 aa12.16□□□□□ -0.46
Trim39-203ENSMUST00000113706 Aqp7O54794 303 aa12.16□□□□□ -0.46
Trim39-203ENSMUST00000113706 Znf239P24399 201 aa12.16□□□□□ -0.46
Trim39-203ENSMUST00000113706 Lypd1Q8BLC3 141 aa12.16□□□□□ -0.46
Trim39-203ENSMUST00000113706 Cyyr1Q8VIH7 165 aa12.16□□□□□ -0.46
Trim39-203ENSMUST00000113706 Muc4Q8JZM8 3443 aa12.16□□□□□ -0.46
Trim39-203ENSMUST00000113706 Tnfsf15Q5UBV8 252 aa12.16□□□□□ -0.46
Trim39-203ENSMUST00000113706 Rasl10aQ8K5A4 203 aa12.16□□□□□ -0.46
Trim39-203ENSMUST00000113706 Stxbp6Q8R3T5 210 aa12.16□□□□□ -0.46
Trim39-203ENSMUST00000113706 Olfr1195Q8VG21 308 aa12.16□□□□□ -0.46
Trim39-203ENSMUST00000113706 Cotl1Q9CQI6 142 aa12.16□□□□□ -0.46
Trim39-203ENSMUST00000113706 Nat6Q9R123 314 aa12.16□□□□□ -0.46
Trim39-203ENSMUST00000113706 Gp9O88186 177 aa12.15□□□□□ -0.46
Trim39-203ENSMUST00000113706 Arl11Q6P3A9 176 aa12.15□□□□□ -0.46
Trim39-203ENSMUST00000113706 Shisa9Q9CZN4 424 aa12.15□□□□□ -0.46
Trim39-203ENSMUST00000113706 Ccdc71lE9Q4T4 218 aa12.15□□□□□ -0.46
Trim39-203ENSMUST00000113706 Plekhb2Q9QZC7 221 aa12.15□□□□□ -0.46
Trim39-203ENSMUST00000113706 Pmp2P24526 132 aa12.15□□□□□ -0.47
Trim39-203ENSMUST00000113706 Gm9961Q8BNV2 113 aa12.15□□□□□ -0.47
Trim39-203ENSMUST00000113706 Fam241bQ9D882 120 aa12.15□□□□□ -0.47
Trim39-203ENSMUST00000113706 Ank2Q8C8R3 3898 aa12.14□□□□□ -0.47
Trim39-203ENSMUST00000113706 F2rl1P55086 399 aa12.14□□□□□ -0.47
Trim39-203ENSMUST00000113706 Adam8Q05910 826 aa12.14□□□□□ -0.47
Trim39-203ENSMUST00000113706 Tnfsf18Q7TS55 173 aa12.14□□□□□ -0.47
Trim39-203ENSMUST00000113706 Spock3Q8BKV0 436 aa12.14□□□□□ -0.47
Trim39-203ENSMUST00000113706 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP12.14□□□□□ -0.47
Trim39-203ENSMUST00000113706 Rhox7bA6PW38 321 aa12.14□□□□□ -0.47
Trim39-203ENSMUST00000113706 Gm9964E9Q9S5 144 aa12.14□□□□□ -0.47
Trim39-203ENSMUST00000113706 P01793 123 aa12.14□□□□□ -0.47
Trim39-203ENSMUST00000113706 AW146154Q3TPQ7 468 aa12.14□□□□□ -0.47
Trim39-203ENSMUST00000113706 Muc15Q8C6Z1 331 aa12.14□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 65.3 ms